RNA–Protein interactions for RNA: ENST00000453453.1

SNX17-204, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,638 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-204ENST00000453453 TRAV8-3A0A0A6YYJ7 113 aa11.11□□□□□ -0.63
SNX17-204ENST00000453453 C11orf45Q8TAV5 145 aa11.11□□□□□ -0.63
SNX17-204ENST00000453453 DEFB104AQ8WTQ1 72 aa11.11□□□□□ -0.63
SNX17-204ENST00000453453 COX7A2LO14548 114 aa11.1□□□□□ -0.63
SNX17-204ENST00000453453 RPL36AP83881 106 aaKnown RBP11.09□□□□□ -0.63
SNX17-204ENST00000453453 RPL36ALQ969Q0 106 aaKnown RBP11.09□□□□□ -0.63
SNX17-204ENST00000453453 PRO0255Q9UI72 69 aa11.09□□□□□ -0.63
SNX17-204ENST00000453453 IGLV5-39A0A0G2JS06 123 aa11.09□□□□□ -0.63
SNX17-204ENST00000453453 TRACP01848 142 aa11.09□□□□□ -0.63
SNX17-204ENST00000453453 HTN3P15516 51 aa11.09□□□□□ -0.63
SNX17-204ENST00000453453 FBN3Q75N90 2809 aa11.08□□□□□ -0.64
SNX17-204ENST00000453453 F5H768 121 aa11.08□□□□□ -0.64
SNX17-204ENST00000453453 CLEC2BQ92478 149 aa11.08□□□□□ -0.64
SNX17-204ENST00000453453 HERVK_113P63121 156 aa11.07□□□□□ -0.64
SNX17-204ENST00000453453 LINC00643Q86TS7 51 aa11.07□□□□□ -0.64
SNX17-204ENST00000453453 PAX4O43316 350 aa11.06□□□□□ -0.64
SNX17-204ENST00000453453 SDIM1Q6ZPB5 146 aa11.06□□□□□ -0.64
SNX17-204ENST00000453453 TENM3Q9P273 2699 aa11.06□□□□□ -0.64
SNX17-204ENST00000453453 CXCL5P42830 114 aa11.06□□□□□ -0.64
SNX17-204ENST00000453453 NANOS2P60321 138 aaKnown RBP11.06□□□□□ -0.64
SNX17-204ENST00000453453 MEIG1Q5JSS6 88 aa11.06□□□□□ -0.64
SNX17-204ENST00000453453 DAND5Q8N907 189 aa11.06□□□□□ -0.64
SNX17-204ENST00000453453 LINC00308Q8TCZ7 52 aa11.06□□□□□ -0.64
SNX17-204ENST00000453453 Q6ZTC4 211 aa11.05□□□□□ -0.64
SNX17-204ENST00000453453 GYPEP15421 78 aa11.04□□□□□ -0.64
SNX17-204ENST00000453453 HERV-K104P63124 156 aa11.04□□□□□ -0.64
SNX17-204ENST00000453453 INAFM2P0DMQ5 153 aa11.03□□□□□ -0.64
SNX17-204ENST00000453453 DAZ4Q86SG3 579 aaKnown RBP11.03□□□□□ -0.64
SNX17-204ENST00000453453 DAZ3Q9NR90 486 aaKnown RBP11.03□□□□□ -0.64
SNX17-204ENST00000453453 Q9UF83 564 aa11.03□□□□□ -0.64
SNX17-204ENST00000453453 CSDC2Q9Y534 153 aaKnown RBP11.03□□□□□ -0.64
SNX17-204ENST00000453453 LOC100131303A0A0U1RQF7 123 aa11.02□□□□□ -0.64
SNX17-204ENST00000453453 CEMP1Q6PRD7 247 aaPredicted RBP11.02□□□□□ -0.65
SNX17-204ENST00000453453 CDKN2A-AS1Q9UH64 79 aa11.02□□□□□ -0.65
SNX17-204ENST00000453453 DEFB131BA0A096LNP1 70 aa11.01□□□□□ -0.65
SNX17-204ENST00000453453 TRAV10A0A0B4J240 114 aa11.01□□□□□ -0.65
SNX17-204ENST00000453453 HUWE1Q7Z6Z7 4374 aaKnown RBP11□□□□□ -0.65
SNX17-204ENST00000453453 IGHV3-38A0A0C4DH36 116 aa11□□□□□ -0.65
SNX17-204ENST00000453453 MEGF8Q7Z7M0 2845 aa11□□□□□ -0.65
SNX17-204ENST00000453453 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.99□□□□□ -0.65
SNX17-204ENST00000453453 IGKV2-29A2NJV5 120 aaPredicted RBP10.99□□□□□ -0.65
SNX17-204ENST00000453453 H3BNG1 76 aa10.99□□□□□ -0.65
SNX17-204ENST00000453453 LINC00694P0DN24 101 aa10.99□□□□□ -0.65
SNX17-204ENST00000453453 DNAH9Q9NYC9 4486 aa10.99□□□□□ -0.65
SNX17-204ENST00000453453 DGAT2L7PQ6IED9 249 aa10.98□□□□□ -0.65
SNX17-204ENST00000453453 SMIM20Q8N5G0 67 aa10.98□□□□□ -0.65
SNX17-204ENST00000453453 Q9H8V8 135 aa10.98□□□□□ -0.65
SNX17-204ENST00000453453 UQCRQO14949 82 aa10.98□□□□□ -0.65
SNX17-204ENST00000453453 NPC2P61916 151 aa10.98□□□□□ -0.65
SNX17-204ENST00000453453 RNASE13Q5GAN3 156 aaKnown RBP10.98□□□□□ -0.65
SNX17-204ENST00000453453 ZNF625Q96I27 306 aaPredicted RBP10.98□□□□□ -0.65
SNX17-204ENST00000453453 FAM236AA0A1B0GUQ0 79 aa10.97□□□□□ -0.65
SNX17-204ENST00000453453 FAM236BA0A1B0GV22 79 aa10.97□□□□□ -0.65
SNX17-204ENST00000453453 C5orf38Q86SI9 138 aa10.97□□□□□ -0.65
SNX17-204ENST00000453453 C3orf22Q8N5N4 141 aa10.97□□□□□ -0.65
SNX17-204ENST00000453453 TRAV13-2A0A0B4J235 113 aa10.96□□□□□ -0.65
SNX17-204ENST00000453453 SMIM1B2RUZ4 78 aa10.96□□□□□ -0.65
SNX17-204ENST00000453453 LINC00242Q5T6M2 205 aa10.96□□□□□ -0.65
SNX17-204ENST00000453453 CHCHD5Q9BSY4 110 aa10.96□□□□□ -0.65
SNX17-204ENST00000453453 BAALC-AS2P0C853 105 aa10.95□□□□□ -0.66
SNX17-204ENST00000453453 RPL28P46779 137 aaKnown RBP10.95□□□□□ -0.66
SNX17-204ENST00000453453 CFAP161Q6P656 301 aa10.95□□□□□ -0.66
SNX17-204ENST00000453453 LINC00526Q96FQ7 95 aa10.95□□□□□ -0.66
SNX17-204ENST00000453453 A0A096LPF7 62 aa10.93□□□□□ -0.66
SNX17-204ENST00000453453 SOSTDC1Q6X4U4 206 aa10.93□□□□□ -0.66
SNX17-204ENST00000453453 UBE2L6O14933 153 aa10.92□□□□□ -0.66
SNX17-204ENST00000453453 COX6A2Q02221 97 aa10.92□□□□□ -0.66
SNX17-204ENST00000453453 SMCR5Q8TEV8 140 aa10.92□□□□□ -0.66
SNX17-204ENST00000453453 TMEM243Q9BU79 118 aa10.92□□□□□ -0.66
SNX17-204ENST00000453453 TRBV6-8A0A0A6YYG3 113 aa10.91□□□□□ -0.66
SNX17-204ENST00000453453 HIST1H4AP62805 103 aaKnown RBP10.91□□□□□ -0.66
SNX17-204ENST00000453453 C9orf153Q5TBE3 101 aa10.91□□□□□ -0.66
SNX17-204ENST00000453453 ATOX1O00244 68 aa10.91□□□□□ -0.66
SNX17-204ENST00000453453 NTM-AS1Q6ZSK4 140 aa10.91□□□□□ -0.66
SNX17-204ENST00000453453 STAB2Q8WWQ8 2551 aa10.91□□□□□ -0.66
SNX17-204ENST00000453453 COL7A1Q02388 2944 aa10.9□□□□□ -0.66
SNX17-204ENST00000453453 A0A1B0GX51 115 aa10.9□□□□□ -0.66
SNX17-204ENST00000453453 CRPP02741 224 aa10.9□□□□□ -0.66
SNX17-204ENST00000453453 MALP21145 153 aa10.9□□□□□ -0.66
SNX17-204ENST00000453453 C22orf24Q9Y442 160 aa10.9□□□□□ -0.66
SNX17-204ENST00000453453 PRKDCP78527 4128 aaKnown RBP10.89□□□□□ -0.67
SNX17-204ENST00000453453 H0YGX0 51 aa10.89□□□□□ -0.67
SNX17-204ENST00000453453 COX7CP15954 63 aa10.89□□□□□ -0.67
SNX17-204ENST00000453453 CDC42SE2Q9NRR3 84 aa10.87□□□□□ -0.67
SNX17-204ENST00000453453 NUPR2A6NF83 97 aa10.87□□□□□ -0.67
SNX17-204ENST00000453453 CRYGAP11844 174 aa10.87□□□□□ -0.67
SNX17-204ENST00000453453 LELP1Q5T871 98 aa10.87□□□□□ -0.67
SNX17-204ENST00000453453 Q6JHZ5 121 aa10.87□□□□□ -0.67
SNX17-204ENST00000453453 OBSCN-AS1Q96MR7 158 aa10.87□□□□□ -0.67
SNX17-204ENST00000453453 LYPD5Q6UWN5 251 aa10.86□□□□□ -0.67
SNX17-204ENST00000453453 KLK5Q9Y337 293 aaPredicted RBP10.85□□□□□ -0.67
SNX17-204ENST00000453453 RPS28P62857 69 aaKnown RBP10.84□□□□□ -0.67
SNX17-204ENST00000453453 FAM218AQ96MZ4 157 aa10.84□□□□□ -0.67
SNX17-204ENST00000453453 DNAL4O96015 105 aa10.84□□□□□ -0.67
SNX17-204ENST00000453453 COX7B2Q8TF08 81 aa10.83□□□□□ -0.68
SNX17-204ENST00000453453 J3KT08 172 aa10.82□□□□□ -0.68
SNX17-204ENST00000453453 GAGE2AQ6NT46 116 aa10.82□□□□□ -0.68
SNX17-204ENST00000453453 C2orf48Q96LS8 159 aa10.82□□□□□ -0.68
SNX17-204ENST00000453453 TRAV13-1A0A0B4J241 112 aa10.81□□□□□ -0.68
SNX17-204ENST00000453453 RPL18AQ02543 176 aaKnown RBP10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 109.6 ms