RNA–Protein interactions for RNA: ENST00000452852.1

LINC00393-202, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 485 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-202ENST00000452852 FAM74A4Q5TZK3 123 aa2.42□□□□□ -2.02
LINC00393-202ENST00000452852 SPINT4Q6UDR6 99 aa2.42□□□□□ -2.02
LINC00393-202ENST00000452852 DPPA3Q6W0C5 159 aa2.42□□□□□ -2.02
LINC00393-202ENST00000452852 DEFB104AQ8WTQ1 72 aa2.42□□□□□ -2.02
LINC00393-202ENST00000452852 HIST1H2BAQ96A08 127 aa2.42□□□□□ -2.02
LINC00393-202ENST00000452852 AQP10Q96PS8 301 aa2.42□□□□□ -2.02
LINC00393-202ENST00000452852 IL36BQ9NZH7 164 aa2.42□□□□□ -2.02
LINC00393-202ENST00000452852 TNFSF18Q9UNG2 199 aa2.42□□□□□ -2.02
LINC00393-202ENST00000452852 ARL2-SNX15V9GYD0 113 aa2.42□□□□□ -2.02
LINC00393-202ENST00000452852 FXYD6-FXYD2A0A087WZ82 144 aa2.41□□□□□ -2.02
LINC00393-202ENST00000452852 TMSB15BA0A087X1C1 80 aa2.41□□□□□ -2.02
LINC00393-202ENST00000452852 TRBV10-1A0A0K0K1A3 114 aa2.41□□□□□ -2.02
LINC00393-202ENST00000452852 CTXND1A0A1B0GTU2 59 aa2.41□□□□□ -2.02
LINC00393-202ENST00000452852 ARMS2P0C7Q2 107 aa2.41□□□□□ -2.02
LINC00393-202ENST00000452852 DDTP30046 118 aa2.41□□□□□ -2.02
LINC00393-202ENST00000452852 PKIAP61925 76 aa2.41□□□□□ -2.02
LINC00393-202ENST00000452852 IFITM2Q01629 132 aa2.41□□□□□ -2.02
LINC00393-202ENST00000452852 Q86TA4 180 aa2.41□□□□□ -2.02
LINC00393-202ENST00000452852 NIT1Q86X76 327 aa2.41□□□□□ -2.02
LINC00393-202ENST00000452852 TCEAL7Q9BRU2 100 aa2.41□□□□□ -2.02
LINC00393-202ENST00000452852 ZFP30Q9Y2G7 519 aa2.41□□□□□ -2.02
LINC00393-202ENST00000452852 PKHD1L1Q86WI1 4243 aa2.41□□□□□ -2.02
LINC00393-202ENST00000452852 TRBV7-3A0A075B6L6 115 aa2.4□□□□□ -2.03
LINC00393-202ENST00000452852 GRIFINA4D1Z8 144 aa2.4□□□□□ -2.03
LINC00393-202ENST00000452852 MAP1LC3B2A6NCE7 125 aa2.4□□□□□ -2.03
LINC00393-202ENST00000452852 SLC25A20O43772 301 aa2.4□□□□□ -2.03
LINC00393-202ENST00000452852 PFDN1O60925 122 aa2.4□□□□□ -2.03
LINC00393-202ENST00000452852 ANGP03950 147 aaKnown RBP2.4□□□□□ -2.03
LINC00393-202ENST00000452852 SMIM17P0DL12 118 aa2.4□□□□□ -2.03
LINC00393-202ENST00000452852 LINC00694P0DN24 101 aa2.4□□□□□ -2.03
LINC00393-202ENST00000452852 AKR1C3P42330 323 aa2.4□□□□□ -2.03
LINC00393-202ENST00000452852 RAB4BP61018 213 aa2.4□□□□□ -2.03
LINC00393-202ENST00000452852 RAB5BP61020 215 aa2.4□□□□□ -2.03
LINC00393-202ENST00000452852 ZNF56Q15929 161 aa2.4□□□□□ -2.03
LINC00393-202ENST00000452852 TMEM97Q5BJF2 176 aa2.4□□□□□ -2.03
LINC00393-202ENST00000452852 RPL7L1Q6DKI1 246 aaKnown RBP2.4□□□□□ -2.03
LINC00393-202ENST00000452852 Q6ZSA8 131 aa2.4□□□□□ -2.03
LINC00393-202ENST00000452852 SCXQ7RTU7 201 aa2.4□□□□□ -2.03
LINC00393-202ENST00000452852 ZC2HC1AQ96GY0 325 aa2.4□□□□□ -2.03
LINC00393-202ENST00000452852 SFRP2Q96HF1 295 aa2.4□□□□□ -2.03
LINC00393-202ENST00000452852 LCE3DQ9BYE3 92 aa2.4□□□□□ -2.03
LINC00393-202ENST00000452852 MAP1LC3BQ9GZQ8 125 aa2.4□□□□□ -2.03
LINC00393-202ENST00000452852 SRRM2Q9UQ35 2752 aaKnown RBP2.4□□□□□ -2.03
LINC00393-202ENST00000452852 TRBV6-8A0A0A6YYG3 113 aa2.39□□□□□ -2.03
LINC00393-202ENST00000452852 UBE2D3P61077 147 aa2.39□□□□□ -2.03
LINC00393-202ENST00000452852 RPL37AP61513 92 aaKnown RBP2.39□□□□□ -2.03
LINC00393-202ENST00000452852 UBE2D2P62837 147 aa2.39□□□□□ -2.03
LINC00393-202ENST00000452852 WFDC2Q14508 124 aa2.39□□□□□ -2.03
LINC00393-202ENST00000452852 SPANXN1Q5VSR9 72 aa2.39□□□□□ -2.03
LINC00393-202ENST00000452852 C3orf22Q8N5N4 141 aa2.39□□□□□ -2.03
LINC00393-202ENST00000452852 ZNF471Q9BX82 626 aaPredicted RBP2.39□□□□□ -2.03
LINC00393-202ENST00000452852 PKIGQ9Y2B9 76 aa2.39□□□□□ -2.03
LINC00393-202ENST00000452852 FAT3Q8TDW7 4589 aa2.39□□□□□ -2.03
LINC00393-202ENST00000452852 TRBV25-1A0A075B6N4 114 aa2.38□□□□□ -2.03
LINC00393-202ENST00000452852 TRBV6-1A0A0K0K1D8 114 aa2.38□□□□□ -2.03
LINC00393-202ENST00000452852 UMAD1C9J7I0 102 aa2.38□□□□□ -2.03
LINC00393-202ENST00000452852 UBE2L6O14933 153 aa2.38□□□□□ -2.03
LINC00393-202ENST00000452852 ARPC5O15511 151 aa2.38□□□□□ -2.03
LINC00393-202ENST00000452852 MGPP08493 103 aa2.38□□□□□ -2.03
LINC00393-202ENST00000452852 CXCL1P09341 107 aa2.38□□□□□ -2.03
LINC00393-202ENST00000452852 CRIP1P50238 77 aa2.38□□□□□ -2.03
LINC00393-202ENST00000452852 BATFQ16520 125 aa2.38□□□□□ -2.03
LINC00393-202ENST00000452852 MIAQ16674 131 aa2.38□□□□□ -2.03
LINC00393-202ENST00000452852 KRTAP25-1Q3LHN0 102 aa2.38□□□□□ -2.03
LINC00393-202ENST00000452852 CLPSL2Q6UWE3 100 aa2.38□□□□□ -2.03
LINC00393-202ENST00000452852 BAGE2Q86Y30 109 aa2.38□□□□□ -2.03
LINC00393-202ENST00000452852 FAM213BQ8TBF2 198 aa2.38□□□□□ -2.03
LINC00393-202ENST00000452852 SFT2D1Q8WV19 159 aa2.38□□□□□ -2.03
LINC00393-202ENST00000452852 DPH3Q96FX2 82 aa2.38□□□□□ -2.03
LINC00393-202ENST00000452852 AP1S3Q96PC3 154 aa2.38□□□□□ -2.03
LINC00393-202ENST00000452852 DERL1Q9BUN8 251 aa2.38□□□□□ -2.03
LINC00393-202ENST00000452852 BATF3Q9NR55 127 aa2.38□□□□□ -2.03
LINC00393-202ENST00000452852 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.37□□□□□ -2.03
LINC00393-202ENST00000452852 IGHV1-24A0A0C4DH33 117 aa2.37□□□□□ -2.03
LINC00393-202ENST00000452852 A0A0D9SG52 128 aa2.37□□□□□ -2.03
LINC00393-202ENST00000452852 MUC21A0A0G2JKD1 596 aa2.37□□□□□ -2.03
LINC00393-202ENST00000452852 MUC21A0A140T8X8 626 aa2.37□□□□□ -2.03
LINC00393-202ENST00000452852 A0A1B0GV50 99 aa2.37□□□□□ -2.03
LINC00393-202ENST00000452852 KANTRA0A1W2PQU2 76 aa2.37□□□□□ -2.03
LINC00393-202ENST00000452852 ESDP10768 282 aa2.37□□□□□ -2.03
LINC00393-202ENST00000452852 EIF5AP63241 154 aaKnown RBP2.37□□□□□ -2.03
LINC00393-202ENST00000452852 RPL19P84098 196 aaKnown RBP2.37□□□□□ -2.03
LINC00393-202ENST00000452852 PMAIP1Q13794 54 aa2.37□□□□□ -2.03
LINC00393-202ENST00000452852 MRPL51Q4U2R6 128 aaKnown RBP2.37□□□□□ -2.03
LINC00393-202ENST00000452852 KRTAP13-2Q52LG2 175 aa2.37□□□□□ -2.03
LINC00393-202ENST00000452852 Q5BKY6 102 aa2.37□□□□□ -2.03
LINC00393-202ENST00000452852 ENHOQ6UWT2 76 aa2.37□□□□□ -2.03
LINC00393-202ENST00000452852 LINC00269Q8N2A0 174 aa2.37□□□□□ -2.03
LINC00393-202ENST00000452852 KCNRGQ8N5I3 272 aa2.37□□□□□ -2.03
LINC00393-202ENST00000452852 C1orf64Q8NEQ6 169 aa2.37□□□□□ -2.03
LINC00393-202ENST00000452852 OR10AG1Q8NH19 301 aa2.37□□□□□ -2.03
LINC00393-202ENST00000452852 DNAJC30Q96LL9 226 aa2.37□□□□□ -2.03
LINC00393-202ENST00000452852 DPH3P1Q9H4G8 78 aa2.37□□□□□ -2.03
LINC00393-202ENST00000452852 MANBALQ9NQG1 85 aa2.37□□□□□ -2.03
LINC00393-202ENST00000452852 LRP1Q07954 4544 aaKnown RBP2.37□□□□□ -2.03
LINC00393-202ENST00000452852 DMBT1Q9UGM3 2413 aaPredicted RBP2.37□□□□□ -2.03
LINC00393-202ENST00000452852 IGLV10-54A0A075B6I4 117 aa2.36□□□□□ -2.03
LINC00393-202ENST00000452852 F2Z2F3 143 aa2.36□□□□□ -2.03
LINC00393-202ENST00000452852 TRGC1P0CF51 173 aa2.36□□□□□ -2.03
LINC00393-202ENST00000452852 RPS20P60866 119 aaKnown RBP2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms