RNA–Protein interactions for RNA: ENST00000451506.5

PTPRN-209, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 4

Gene PTPRN, Length 466 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-209ENST00000451506 C2orf66Q6UXQ4 117 aa10.15□□□□□ -0.78
PTPRN-209ENST00000451506 ZNF861PO60384 105 aa10.14□□□□□ -0.79
PTPRN-209ENST00000451506 PAPPA-AS1Q5QFB9 102 aa10.14□□□□□ -0.79
PTPRN-209ENST00000451506 LINC00242Q5T6M2 205 aa10.14□□□□□ -0.79
PTPRN-209ENST00000451506 TEX43Q6ZNM6 134 aa10.14□□□□□ -0.79
PTPRN-209ENST00000451506 RPS10P5Q9NQ39 176 aa10.14□□□□□ -0.79
PTPRN-209ENST00000451506 LINC01549A6NIU2 74 aa10.13□□□□□ -0.79
PTPRN-209ENST00000451506 SVBPQ8N300 66 aa10.12□□□□□ -0.79
PTPRN-209ENST00000451506 SNAPINO95295 136 aa10.11□□□□□ -0.79
PTPRN-209ENST00000451506 PACRGQ96M98 296 aaPredicted RBP10.11□□□□□ -0.79
PTPRN-209ENST00000451506 TSPAN13O95857 204 aa10.1□□□□□ -0.79
PTPRN-209ENST00000451506 KIAA1644Q3SXP7 199 aa10.1□□□□□ -0.79
PTPRN-209ENST00000451506 TIMM17AQ99595 171 aa10.1□□□□□ -0.79
PTPRN-209ENST00000451506 VCX2Q9H322 139 aa10.1□□□□□ -0.79
PTPRN-209ENST00000451506 APOC3P02656 99 aa10.09□□□□□ -0.79
PTPRN-209ENST00000451506 LCE2AQ5TA79 106 aaPredicted RBP10.09□□□□□ -0.79
PTPRN-209ENST00000451506 LINC01561Q8N1V8 128 aa10.09□□□□□ -0.79
PTPRN-209ENST00000451506 AMELXQ99217 191 aa10.09□□□□□ -0.79
PTPRN-209ENST00000451506 ALKBH7Q9BT30 221 aaPredicted RBP10.09□□□□□ -0.79
PTPRN-209ENST00000451506 MRPL18Q9H0U6 180 aaKnown RBP10.09□□□□□ -0.79
PTPRN-209ENST00000451506 IGIPA6NJ69 53 aa10.08□□□□□ -0.8
PTPRN-209ENST00000451506 NUPR1O60356 82 aa10.08□□□□□ -0.8
PTPRN-209ENST00000451506 SEC11AP67812 179 aa10.08□□□□□ -0.8
PTPRN-209ENST00000451506 TOMM6Q96B49 74 aa10.08□□□□□ -0.8
PTPRN-209ENST00000451506 C22orf24Q9Y442 160 aa10.08□□□□□ -0.8
PTPRN-209ENST00000451506 A0A087X002 238 aa10.07□□□□□ -0.8
PTPRN-209ENST00000451506 LINC01546A6NGU7 62 aa10.07□□□□□ -0.8
PTPRN-209ENST00000451506 FABP9Q0Z7S8 132 aa10.07□□□□□ -0.8
PTPRN-209ENST00000451506 LINC00173Q6ZV60 143 aa10.07□□□□□ -0.8
PTPRN-209ENST00000451506 ERASQ7Z444 233 aa10.06□□□□□ -0.8
PTPRN-209ENST00000451506 LINC00469Q8N7U9 141 aa10.06□□□□□ -0.8
PTPRN-209ENST00000451506 SMCO4Q9NRQ5 59 aa10.06□□□□□ -0.8
PTPRN-209ENST00000451506 FA2HQ7L5A8 372 aa10.05□□□□□ -0.8
PTPRN-209ENST00000451506 FAM19A3Q7Z5A8 133 aa10.05□□□□□ -0.8
PTPRN-209ENST00000451506 HERVK_113P63121 156 aa10.04□□□□□ -0.8
PTPRN-209ENST00000451506 LBHQ53QV2 105 aaPredicted RBP10.04□□□□□ -0.8
PTPRN-209ENST00000451506 ZC2HC1BQ5TFG8 222 aa10.04□□□□□ -0.8
PTPRN-209ENST00000451506 XAGE1AQ9HD64 81 aa10.04□□□□□ -0.8
PTPRN-209ENST00000451506 PRSS2P07478 247 aa10.03□□□□□ -0.8
PTPRN-209ENST00000451506 CKS1BP61024 79 aa10.03□□□□□ -0.8
PTPRN-209ENST00000451506 SCGB3A1Q96QR1 104 aa10.03□□□□□ -0.8
PTPRN-209ENST00000451506 FAT4Q6V0I7 4981 aa10.02□□□□□ -0.81
PTPRN-209ENST00000451506 Q8IZM0 81 aa10.02□□□□□ -0.81
PTPRN-209ENST00000451506 GEMIN7Q9H840 131 aaKnown RBP10.02□□□□□ -0.81
PTPRN-209ENST00000451506 TOMM7Q9P0U1 55 aa10.02□□□□□ -0.81
PTPRN-209ENST00000451506 TP73-AS1Q9UF72 201 aa10.02□□□□□ -0.81
PTPRN-209ENST00000451506 TRAPPC1Q9Y5R8 145 aa10.02□□□□□ -0.81
PTPRN-209ENST00000451506 BCE1O60756 84 aa10.01□□□□□ -0.81
PTPRN-209ENST00000451506 CRYGAP11844 174 aa10.01□□□□□ -0.81
PTPRN-209ENST00000451506 RPL28P46779 137 aaKnown RBP10.01□□□□□ -0.81
PTPRN-209ENST00000451506 C6orf226Q5I0X4 101 aa10.01□□□□□ -0.81
PTPRN-209ENST00000451506 TYMSOSQ8TAI1 123 aa10.01□□□□□ -0.81
PTPRN-209ENST00000451506 MRPL55Q7Z7F7 128 aaKnown RBP10□□□□□ -0.81
PTPRN-209ENST00000451506 RAB5BP61020 215 aa9.98□□□□□ -0.81
PTPRN-209ENST00000451506 C18orf32Q8TCD1 76 aa9.98□□□□□ -0.81
PTPRN-209ENST00000451506 TINCRA0A1B0GVN0 87 aa9.97□□□□□ -0.81
PTPRN-209ENST00000451506 F8VRH5 84 aa9.97□□□□□ -0.81
PTPRN-209ENST00000451506 KRTAP13-2Q52LG2 175 aa9.97□□□□□ -0.81
PTPRN-209ENST00000451506 ANAPC11Q9NYG5 84 aa9.97□□□□□ -0.81
PTPRN-209ENST00000451506 HBDP02042 147 aa9.96□□□□□ -0.82
PTPRN-209ENST00000451506 CXCL5P42830 114 aa9.96□□□□□ -0.82
PTPRN-209ENST00000451506 PMVKQ15126 192 aa9.96□□□□□ -0.82
PTPRN-209ENST00000451506 LINC00167Q96N53 147 aa9.96□□□□□ -0.82
PTPRN-209ENST00000451506 CDKN2A-AS1Q9UH64 79 aa9.96□□□□□ -0.82
PTPRN-209ENST00000451506 IGLV5-45A0A087WSX0 123 aa9.95□□□□□ -0.82
PTPRN-209ENST00000451506 KRTAP9-6A0A140TA67 174 aa9.95□□□□□ -0.82
PTPRN-209ENST00000451506 RPL37AP8A6NKH3 93 aa9.95□□□□□ -0.82
PTPRN-209ENST00000451506 LINC00614P0C842 121 aa9.95□□□□□ -0.82
PTPRN-209ENST00000451506 YPEL4Q96NS1 127 aa9.95□□□□□ -0.82
PTPRN-209ENST00000451506 RETNLBQ9BQ08 111 aa9.95□□□□□ -0.82
PTPRN-209ENST00000451506 KRTAP13-1Q8IUC0 172 aa9.94□□□□□ -0.82
PTPRN-209ENST00000451506 CST9LQ9H4G1 147 aa9.94□□□□□ -0.82
PTPRN-209ENST00000451506 PDZD11Q5EBL8 140 aa9.93□□□□□ -0.82
PTPRN-209ENST00000451506 H3BRM9 83 aa9.92□□□□□ -0.82
PTPRN-209ENST00000451506 ATP5LO75964 103 aa9.92□□□□□ -0.82
PTPRN-209ENST00000451506 MUC17Q685J3 4493 aa9.92□□□□□ -0.82
PTPRN-209ENST00000451506 A0A096LNJ9 63 aa9.91□□□□□ -0.82
PTPRN-209ENST00000451506 SMIM1B2RUZ4 78 aa9.91□□□□□ -0.82
PTPRN-209ENST00000451506 TPRXLQ17RH7 258 aa9.91□□□□□ -0.82
PTPRN-209ENST00000451506 FAM229BQ4G0N7 80 aa9.91□□□□□ -0.82
PTPRN-209ENST00000451506 URB1-AS1Q96HZ7 61 aa9.91□□□□□ -0.82
PTPRN-209ENST00000451506 GAGE10A6NGK3 116 aa9.9□□□□□ -0.82
PTPRN-209ENST00000451506 LINC00304Q8N9R0 145 aa9.9□□□□□ -0.82
PTPRN-209ENST00000451506 CHCHD1Q96BP2 118 aaKnown RBP9.9□□□□□ -0.82
PTPRN-209ENST00000451506 IGLV5-37A0A075B6J1 123 aa9.89□□□□□ -0.83
PTPRN-209ENST00000451506 IGLC3P0DOY3 106 aa9.89□□□□□ -0.83
PTPRN-209ENST00000451506 CBLN2Q8IUK8 224 aa9.89□□□□□ -0.83
PTPRN-209ENST00000451506 CDIP1Q9H305 208 aa9.89□□□□□ -0.83
PTPRN-209ENST00000451506 COX7B2Q8TF08 81 aa9.88□□□□□ -0.83
PTPRN-209ENST00000451506 UBE2AP49459 152 aa9.87□□□□□ -0.83
PTPRN-209ENST00000451506 IGLV7-46A0A075B6I9 117 aa9.86□□□□□ -0.83
PTPRN-209ENST00000451506 NDUFA6P56556 154 aa9.86□□□□□ -0.83
PTPRN-209ENST00000451506 PMCHL1Q16048 86 aa9.85□□□□□ -0.83
PTPRN-209ENST00000451506 IGKV2D-26A0A0A0MRZ7 120 aa9.84□□□□□ -0.83
PTPRN-209ENST00000451506 SPINK8P0C7L1 97 aa9.84□□□□□ -0.83
PTPRN-209ENST00000451506 CTAG1AP78358 180 aa9.84□□□□□ -0.83
PTPRN-209ENST00000451506 SFTA2Q6UW10 78 aa9.84□□□□□ -0.83
PTPRN-209ENST00000451506 NKAPP1Q8N9T2 125 aa9.84□□□□□ -0.83
PTPRN-209ENST00000451506 IGLV5-39A0A0G2JS06 123 aa9.83□□□□□ -0.84
PTPRN-209ENST00000451506 HSBP1O75506 76 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms