RNA–Protein interactions for RNA: ENST00000450385.5

SGCE-208, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 815 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-208ENST00000450385 KIAA1644Q3SXP7 199 aa9.87□□□□□ -0.83
SGCE-208ENST00000450385 SCGB3A1Q96QR1 104 aa9.87□□□□□ -0.83
SGCE-208ENST00000450385 ALKBH7Q9BT30 221 aaPredicted RBP9.87□□□□□ -0.83
SGCE-208ENST00000450385 COMMD7Q86VX2 200 aa9.86□□□□□ -0.83
SGCE-208ENST00000450385 CARHSP1Q9Y2V2 147 aaKnown RBP9.86□□□□□ -0.83
SGCE-208ENST00000450385 TINCRA0A1B0GVN0 87 aa9.85□□□□□ -0.83
SGCE-208ENST00000450385 GAGE2EQ4V326 116 aa9.85□□□□□ -0.83
SGCE-208ENST00000450385 C1orf137Q5JT78 98 aa9.85□□□□□ -0.83
SGCE-208ENST00000450385 PHF5AQ7RTV0 110 aaKnown RBP9.85□□□□□ -0.83
SGCE-208ENST00000450385 GAGE2DQ9UEU5 116 aa9.85□□□□□ -0.83
SGCE-208ENST00000450385 CDKN2A-AS1Q9UH64 79 aa9.85□□□□□ -0.83
SGCE-208ENST00000450385 F8VRH5 84 aa9.84□□□□□ -0.83
SGCE-208ENST00000450385 ZC2HC1BQ5TFG8 222 aa9.84□□□□□ -0.83
SGCE-208ENST00000450385 C2orf82Q6UX34 121 aa9.84□□□□□ -0.83
SGCE-208ENST00000450385 DIRC1Q969H9 104 aa9.84□□□□□ -0.83
SGCE-208ENST00000450385 FABP9Q0Z7S8 132 aa9.83□□□□□ -0.84
SGCE-208ENST00000450385 PDZD11Q5EBL8 140 aa9.83□□□□□ -0.84
SGCE-208ENST00000450385 FA2HQ7L5A8 372 aa9.83□□□□□ -0.84
SGCE-208ENST00000450385 SMCO4Q9NRQ5 59 aa9.83□□□□□ -0.84
SGCE-208ENST00000450385 TOMM7Q9P0U1 55 aa9.83□□□□□ -0.84
SGCE-208ENST00000450385 IGLV5-45A0A087WSX0 123 aa9.82□□□□□ -0.84
SGCE-208ENST00000450385 TMEM238LA0A1B0GVL6 79 aa9.82□□□□□ -0.84
SGCE-208ENST00000450385 IGLV7-43P04211 117 aa9.82□□□□□ -0.84
SGCE-208ENST00000450385 MRPL18Q9H0U6 180 aaKnown RBP9.82□□□□□ -0.84
SGCE-208ENST00000450385 RPS10P5Q9NQ39 176 aa9.82□□□□□ -0.84
SGCE-208ENST00000450385 FAM168BA1KXE4 195 aa9.81□□□□□ -0.84
SGCE-208ENST00000450385 PMVKQ15126 192 aa9.81□□□□□ -0.84
SGCE-208ENST00000450385 CST9LQ9H4G1 147 aa9.81□□□□□ -0.84
SGCE-208ENST00000450385 M0QXV9 152 aa9.8□□□□□ -0.84
SGCE-208ENST00000450385 LBHQ53QV2 105 aaPredicted RBP9.8□□□□□ -0.84
SGCE-208ENST00000450385 FAM19A5Q7Z5A7 132 aaPredicted RBP9.8□□□□□ -0.84
SGCE-208ENST00000450385 LINC00469Q8N7U9 141 aa9.8□□□□□ -0.84
SGCE-208ENST00000450385 UBE2BP63146 152 aa9.79□□□□□ -0.84
SGCE-208ENST00000450385 C9orf129Q5T035 196 aaKnown RBP9.79□□□□□ -0.84
SGCE-208ENST00000450385 TP73-AS1Q9UF72 201 aa9.79□□□□□ -0.84
SGCE-208ENST00000450385 SMIM1B2RUZ4 78 aa9.78□□□□□ -0.84
SGCE-208ENST00000450385 H3BRM9 83 aa9.78□□□□□ -0.84
SGCE-208ENST00000450385 NDUFA5Q16718 116 aa9.78□□□□□ -0.84
SGCE-208ENST00000450385 NUPR1O60356 82 aa9.77□□□□□ -0.85
SGCE-208ENST00000450385 LINC00614P0C842 121 aa9.77□□□□□ -0.85
SGCE-208ENST00000450385 RAB5BP61020 215 aa9.77□□□□□ -0.85
SGCE-208ENST00000450385 KRTAP7-1Q8IUC3 87 aa9.77□□□□□ -0.85
SGCE-208ENST00000450385 COX7B2Q8TF08 81 aa9.77□□□□□ -0.85
SGCE-208ENST00000450385 H0Y9J4 135 aa9.76□□□□□ -0.85
SGCE-208ENST00000450385 SNAPINO95295 136 aa9.76□□□□□ -0.85
SGCE-208ENST00000450385 SVBPQ8N300 66 aa9.76□□□□□ -0.85
SGCE-208ENST00000450385 TRAPPC1Q9Y5R8 145 aa9.76□□□□□ -0.85
SGCE-208ENST00000450385 C22orf24Q9Y442 160 aa9.75□□□□□ -0.85
SGCE-208ENST00000450385 SFTA2Q6UW10 78 aa9.74□□□□□ -0.85
SGCE-208ENST00000450385 IGLV1-50A0A075B6I6 118 aa9.73□□□□□ -0.85
SGCE-208ENST00000450385 IGLC3P0DOY3 106 aa9.73□□□□□ -0.85
SGCE-208ENST00000450385 C18orf32Q8TCD1 76 aa9.73□□□□□ -0.85
SGCE-208ENST00000450385 ATP5LO75964 103 aa9.72□□□□□ -0.85
SGCE-208ENST00000450385 HBDP02042 147 aa9.72□□□□□ -0.85
SGCE-208ENST00000450385 KRTAP11-1Q8IUC1 163 aa9.72□□□□□ -0.85
SGCE-208ENST00000450385 ZNF861PO60384 105 aa9.71□□□□□ -0.86
SGCE-208ENST00000450385 APOC3P02656 99 aa9.71□□□□□ -0.86
SGCE-208ENST00000450385 MRPL55Q7Z7F7 128 aaKnown RBP9.71□□□□□ -0.86
SGCE-208ENST00000450385 XAGE1AQ9HD64 81 aa9.71□□□□□ -0.86
SGCE-208ENST00000450385 UBR4Q5T4S7 5183 aa9.71□□□□□ -0.86
SGCE-208ENST00000450385 IGLV5-39A0A0G2JS06 123 aa9.7□□□□□ -0.86
SGCE-208ENST00000450385 RPL13AP40429 203 aaKnown RBP9.7□□□□□ -0.86
SGCE-208ENST00000450385 COX17Q14061 63 aa9.7□□□□□ -0.86
SGCE-208ENST00000450385 IGLV5-37A0A075B6J1 123 aa9.69□□□□□ -0.86
SGCE-208ENST00000450385 A0A096LNJ9 63 aa9.69□□□□□ -0.86
SGCE-208ENST00000450385 SPINK8P0C7L1 97 aa9.68□□□□□ -0.86
SGCE-208ENST00000450385 TMA7Q9Y2S6 64 aaKnown RBP9.68□□□□□ -0.86
SGCE-208ENST00000450385 NDUFA6P56556 154 aa9.67□□□□□ -0.86
SGCE-208ENST00000450385 URB1-AS1Q96HZ7 61 aa9.67□□□□□ -0.86
SGCE-208ENST00000450385 RPL28P46779 137 aaKnown RBP9.66□□□□□ -0.86
SGCE-208ENST00000450385 CHCHD1Q96BP2 118 aaKnown RBP9.66□□□□□ -0.86
SGCE-208ENST00000450385 BCE1O60756 84 aa9.65□□□□□ -0.86
SGCE-208ENST00000450385 KRTAP1-4P0C5Y4 121 aa9.65□□□□□ -0.86
SGCE-208ENST00000450385 ZNF22P17026 224 aaPredicted RBP9.65□□□□□ -0.86
SGCE-208ENST00000450385 LRP2P98164 4655 aa9.64□□□□□ -0.87
SGCE-208ENST00000450385 BAGE3Q86Y29 109 aa9.64□□□□□ -0.87
SGCE-208ENST00000450385 PRR26Q8N8Z3 221 aa9.64□□□□□ -0.87
SGCE-208ENST00000450385 NKAPP1Q8N9T2 125 aa9.64□□□□□ -0.87
SGCE-208ENST00000450385 LINC00167Q96N53 147 aa9.64□□□□□ -0.87
SGCE-208ENST00000450385 TRAV12-1A0A0B4J245 112 aa9.63□□□□□ -0.87
SGCE-208ENST00000450385 RPL24P83731 157 aaKnown RBP9.62□□□□□ -0.87
SGCE-208ENST00000450385 YPEL4Q96NS1 127 aa9.62□□□□□ -0.87
SGCE-208ENST00000450385 GHRHP01286 108 aa9.61□□□□□ -0.87
SGCE-208ENST00000450385 ERG28Q9UKR5 140 aa9.61□□□□□ -0.87
SGCE-208ENST00000450385 TMEM170BQ5T4T1 132 aa9.6□□□□□ -0.87
SGCE-208ENST00000450385 CHTOPQ9Y3Y2 248 aaKnown RBP9.6□□□□□ -0.87
SGCE-208ENST00000450385 C11orf86A6NJI1 115 aa9.59□□□□□ -0.87
SGCE-208ENST00000450385 PFN2P35080 140 aa9.59□□□□□ -0.87
SGCE-208ENST00000450385 PMCHL1Q16048 86 aa9.59□□□□□ -0.87
SGCE-208ENST00000450385 IFI27L1Q96BM0 104 aa9.59□□□□□ -0.87
SGCE-208ENST00000450385 SND1-IT1Q9HBX3 110 aa9.58□□□□□ -0.88
SGCE-208ENST00000450385 RPL37AP8A6NKH3 93 aa9.57□□□□□ -0.88
SGCE-208ENST00000450385 LINC00587B1AMM8 73 aa9.57□□□□□ -0.88
SGCE-208ENST00000450385 ZNF625Q96I27 306 aaPredicted RBP9.57□□□□□ -0.88
SGCE-208ENST00000450385 HSBP1O75506 76 aa9.55□□□□□ -0.88
SGCE-208ENST00000450385 CRYGAP11844 174 aa9.55□□□□□ -0.88
SGCE-208ENST00000450385 VPREB1P12018 145 aa9.55□□□□□ -0.88
SGCE-208ENST00000450385 KRTAP13-1Q8IUC0 172 aa9.55□□□□□ -0.88
SGCE-208ENST00000450385 TMEM223A0PJW6 202 aa9.54□□□□□ -0.88
SGCE-208ENST00000450385 UBE2AP49459 152 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms