RNA–Protein interactions for RNA: ENST00000449744.1

CHD3-205, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 880 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-205ENST00000449744 COX19Q49B96 90 aa9.41□□□□□ -0.9
CHD3-205ENST00000449744 C6orf226Q5I0X4 101 aa9.41□□□□□ -0.9
CHD3-205ENST00000449744 FAM19A3Q7Z5A8 133 aa9.41□□□□□ -0.9
CHD3-205ENST00000449744 SCGB3A1Q96QR1 104 aa9.41□□□□□ -0.9
CHD3-205ENST00000449744 NDUFC2-KCTD14E9PQ53 114 aa9.4□□□□□ -0.9
CHD3-205ENST00000449744 C10orf91Q5T1B1 145 aa9.4□□□□□ -0.9
CHD3-205ENST00000449744 ERASQ7Z444 233 aa9.4□□□□□ -0.9
CHD3-205ENST00000449744 ALKBH7Q9BT30 221 aaPredicted RBP9.4□□□□□ -0.9
CHD3-205ENST00000449744 LINC01549A6NIU2 74 aa9.39□□□□□ -0.91
CHD3-205ENST00000449744 Q8IZM0 81 aa9.39□□□□□ -0.91
CHD3-205ENST00000449744 RPS10P5Q9NQ39 176 aa9.38□□□□□ -0.91
CHD3-205ENST00000449744 CDKN2A-AS1Q9UH64 79 aa9.38□□□□□ -0.91
CHD3-205ENST00000449744 M0QXV9 152 aa9.37□□□□□ -0.91
CHD3-205ENST00000449744 UBE2BP63146 152 aa9.37□□□□□ -0.91
CHD3-205ENST00000449744 FABP9Q0Z7S8 132 aa9.37□□□□□ -0.91
CHD3-205ENST00000449744 RHEBQ15382 184 aa9.37□□□□□ -0.91
CHD3-205ENST00000449744 FA2HQ7L5A8 372 aa9.37□□□□□ -0.91
CHD3-205ENST00000449744 MRPL18Q9H0U6 180 aaKnown RBP9.37□□□□□ -0.91
CHD3-205ENST00000449744 SMCO4Q9NRQ5 59 aa9.37□□□□□ -0.91
CHD3-205ENST00000449744 IGLV7-43P04211 117 aa9.36□□□□□ -0.91
CHD3-205ENST00000449744 KRTAP10-8P60410 259 aa9.36□□□□□ -0.91
CHD3-205ENST00000449744 LINC00469Q8N7U9 141 aa9.36□□□□□ -0.91
CHD3-205ENST00000449744 LINC01546A6NGU7 62 aa9.35□□□□□ -0.91
CHD3-205ENST00000449744 C9orf129Q5T035 196 aaKnown RBP9.35□□□□□ -0.91
CHD3-205ENST00000449744 TINCRA0A1B0GVN0 87 aa9.34□□□□□ -0.91
CHD3-205ENST00000449744 F8VRH5 84 aa9.34□□□□□ -0.91
CHD3-205ENST00000449744 CXCL5P42830 114 aa9.34□□□□□ -0.91
CHD3-205ENST00000449744 DIRC1Q969H9 104 aa9.34□□□□□ -0.91
CHD3-205ENST00000449744 KRTAP11-1Q8IUC1 163 aa9.33□□□□□ -0.92
CHD3-205ENST00000449744 KRTAP7-1Q8IUC3 87 aa9.33□□□□□ -0.92
CHD3-205ENST00000449744 PMVKQ15126 192 aa9.32□□□□□ -0.92
CHD3-205ENST00000449744 PDZD11Q5EBL8 140 aa9.32□□□□□ -0.92
CHD3-205ENST00000449744 CST9LQ9H4G1 147 aa9.32□□□□□ -0.92
CHD3-205ENST00000449744 SMIM1B2RUZ4 78 aa9.31□□□□□ -0.92
CHD3-205ENST00000449744 ODF1Q14990 250 aa9.31□□□□□ -0.92
CHD3-205ENST00000449744 COX7B2Q8TF08 81 aa9.31□□□□□ -0.92
CHD3-205ENST00000449744 XAGE1AQ9HD64 81 aa9.31□□□□□ -0.92
CHD3-205ENST00000449744 SCO1O75880 301 aa9.3□□□□□ -0.92
CHD3-205ENST00000449744 TRAPPC1Q9Y5R8 145 aa9.3□□□□□ -0.92
CHD3-205ENST00000449744 TNXBP22105 4242 aa9.29□□□□□ -0.92
CHD3-205ENST00000449744 IGLV5-45A0A087WSX0 123 aa9.29□□□□□ -0.92
CHD3-205ENST00000449744 H0Y9J4 135 aa9.29□□□□□ -0.92
CHD3-205ENST00000449744 LBHQ53QV2 105 aaPredicted RBP9.29□□□□□ -0.92
CHD3-205ENST00000449744 C22orf24Q9Y442 160 aa9.29□□□□□ -0.92
CHD3-205ENST00000449744 H3BRM9 83 aa9.28□□□□□ -0.92
CHD3-205ENST00000449744 SPINK8P0C7L1 97 aa9.28□□□□□ -0.92
CHD3-205ENST00000449744 NDUFA6P56556 154 aa9.28□□□□□ -0.92
CHD3-205ENST00000449744 LINC00614P0C842 121 aa9.26□□□□□ -0.93
CHD3-205ENST00000449744 CBLN2Q8IUK8 224 aa9.26□□□□□ -0.93
CHD3-205ENST00000449744 C18orf32Q8TCD1 76 aa9.26□□□□□ -0.93
CHD3-205ENST00000449744 NUPR1O60356 82 aa9.25□□□□□ -0.93
CHD3-205ENST00000449744 HBDP02042 147 aa9.25□□□□□ -0.93
CHD3-205ENST00000449744 PRR26Q8N8Z3 221 aa9.25□□□□□ -0.93
CHD3-205ENST00000449744 ATP5LO75964 103 aa9.24□□□□□ -0.93
CHD3-205ENST00000449744 RAB5BP61020 215 aa9.24□□□□□ -0.93
CHD3-205ENST00000449744 MRPL55Q7Z7F7 128 aaKnown RBP9.24□□□□□ -0.93
CHD3-205ENST00000449744 TP73-AS1Q9UF72 201 aa9.24□□□□□ -0.93
CHD3-205ENST00000449744 A0A096LNJ9 63 aa9.23□□□□□ -0.93
CHD3-205ENST00000449744 IGLC3P0DOY3 106 aa9.23□□□□□ -0.93
CHD3-205ENST00000449744 URB1-AS1Q96HZ7 61 aa9.23□□□□□ -0.93
CHD3-205ENST00000449744 IGLV1-50A0A075B6I6 118 aa9.22□□□□□ -0.93
CHD3-205ENST00000449744 ZNF861PO60384 105 aa9.22□□□□□ -0.93
CHD3-205ENST00000449744 PMCHL1Q16048 86 aa9.22□□□□□ -0.93
CHD3-205ENST00000449744 ZNF22P17026 224 aaPredicted RBP9.21□□□□□ -0.94
CHD3-205ENST00000449744 KRTAP1-4P0C5Y4 121 aa9.19□□□□□ -0.94
CHD3-205ENST00000449744 PFN2P35080 140 aa9.19□□□□□ -0.94
CHD3-205ENST00000449744 BAGE3Q86Y29 109 aa9.19□□□□□ -0.94
CHD3-205ENST00000449744 NKAPP1Q8N9T2 125 aa9.19□□□□□ -0.94
CHD3-205ENST00000449744 LINC00167Q96N53 147 aa9.19□□□□□ -0.94
CHD3-205ENST00000449744 IGLV5-39A0A0G2JS06 123 aa9.18□□□□□ -0.94
CHD3-205ENST00000449744 GAGE10A6NGK3 116 aa9.18□□□□□ -0.94
CHD3-205ENST00000449744 RPL37AP8A6NKH3 93 aa9.18□□□□□ -0.94
CHD3-205ENST00000449744 RPL13AP40429 203 aaKnown RBP9.18□□□□□ -0.94
CHD3-205ENST00000449744 RPL28P46779 137 aaKnown RBP9.18□□□□□ -0.94
CHD3-205ENST00000449744 TMEM170BQ5T4T1 132 aa9.18□□□□□ -0.94
CHD3-205ENST00000449744 LRP2P98164 4655 aa9.17□□□□□ -0.94
CHD3-205ENST00000449744 BCE1O60756 84 aa9.17□□□□□ -0.94
CHD3-205ENST00000449744 IGLV5-37A0A075B6J1 123 aa9.16□□□□□ -0.94
CHD3-205ENST00000449744 ERG28Q9UKR5 140 aa9.16□□□□□ -0.94
CHD3-205ENST00000449744 TMA7Q9Y2S6 64 aaKnown RBP9.16□□□□□ -0.94
CHD3-205ENST00000449744 C11orf86A6NJI1 115 aa9.15□□□□□ -0.94
CHD3-205ENST00000449744 LCE2DQ5TA82 110 aaPredicted RBP9.15□□□□□ -0.94
CHD3-205ENST00000449744 CHTOPQ9Y3Y2 248 aaKnown RBP9.15□□□□□ -0.94
CHD3-205ENST00000449744 COLCA2A8K830 154 aa9.14□□□□□ -0.95
CHD3-205ENST00000449744 COX17Q14061 63 aa9.14□□□□□ -0.95
CHD3-205ENST00000449744 SFTA2Q6UW10 78 aa9.14□□□□□ -0.95
CHD3-205ENST00000449744 CHCHD1Q96BP2 118 aaKnown RBP9.14□□□□□ -0.95
CHD3-205ENST00000449744 ZNF625Q96I27 306 aaPredicted RBP9.14□□□□□ -0.95
CHD3-205ENST00000449744 YPEL4Q96NS1 127 aa9.13□□□□□ -0.95
CHD3-205ENST00000449744 UBE2AP49459 152 aa9.12□□□□□ -0.95
CHD3-205ENST00000449744 RPL24P83731 157 aaKnown RBP9.12□□□□□ -0.95
CHD3-205ENST00000449744 IFI27L1Q96BM0 104 aa9.12□□□□□ -0.95
CHD3-205ENST00000449744 SND1-IT1Q9HBX3 110 aa9.12□□□□□ -0.95
CHD3-205ENST00000449744 IGKV2-28A0A075B6P5 120 aa9.11□□□□□ -0.95
CHD3-205ENST00000449744 IGKV2D-28P01615 120 aa9.11□□□□□ -0.95
CHD3-205ENST00000449744 RNF213Q63HN8 5207 aa9.1□□□□□ -0.95
CHD3-205ENST00000449744 TRAV12-1A0A0B4J245 112 aa9.1□□□□□ -0.95
CHD3-205ENST00000449744 HSBP1O75506 76 aa9.1□□□□□ -0.95
CHD3-205ENST00000449744 VPREB1P12018 145 aa9.09□□□□□ -0.95
CHD3-205ENST00000449744 LINC00158P58513 81 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms