RNA–Protein interactions for RNA: ENST00000448935.6

VIPAS39-203, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,623 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-203ENST00000448935 C15orf53Q8NAA6 179 aa7.23□□□□□ -1.25
VIPAS39-203ENST00000448935 COX7A2LO14548 114 aa7.23□□□□□ -1.25
VIPAS39-203ENST00000448935 CFC1BP0CG36 223 aa7.23□□□□□ -1.25
VIPAS39-203ENST00000448935 CFC1P0CG37 223 aa7.23□□□□□ -1.25
VIPAS39-203ENST00000448935 CLPSL2Q6UWE3 100 aa7.23□□□□□ -1.25
VIPAS39-203ENST00000448935 MRAPQ8TCY5 172 aa7.23□□□□□ -1.25
VIPAS39-203ENST00000448935 CHCHD10Q8WYQ3 142 aaPredicted RBP7.23□□□□□ -1.25
VIPAS39-203ENST00000448935 PPDPFQ9H3Y8 114 aa7.23□□□□□ -1.25
VIPAS39-203ENST00000448935 TOMM7Q9P0U1 55 aa7.23□□□□□ -1.25
VIPAS39-203ENST00000448935 PRO1854Q9UHT4 67 aa7.23□□□□□ -1.25
VIPAS39-203ENST00000448935 TRAV8-4A0A0B4J246 113 aa7.22□□□□□ -1.25
VIPAS39-203ENST00000448935 K7EP34 96 aa7.22□□□□□ -1.25
VIPAS39-203ENST00000448935 CRPP02741 224 aa7.22□□□□□ -1.25
VIPAS39-203ENST00000448935 ADAMTSL4-AS1Q5T5F5 129 aa7.22□□□□□ -1.25
VIPAS39-203ENST00000448935 Q8IZM0 81 aa7.22□□□□□ -1.25
VIPAS39-203ENST00000448935 PRR34Q9NV39 138 aa7.22□□□□□ -1.25
VIPAS39-203ENST00000448935 SPCS1Q9Y6A9 102 aa7.22□□□□□ -1.25
VIPAS39-203ENST00000448935 CXCL5P42830 114 aa7.21□□□□□ -1.26
VIPAS39-203ENST00000448935 C6orf226Q5I0X4 101 aa7.21□□□□□ -1.26
VIPAS39-203ENST00000448935 NAA38Q9BRA0 125 aaKnown RBP7.21□□□□□ -1.26
VIPAS39-203ENST00000448935 KLK12Q9UKR0 248 aa7.2□□□□□ -1.26
VIPAS39-203ENST00000448935 PKD1L1Q8TDX9 2849 aa7.2□□□□□ -1.26
VIPAS39-203ENST00000448935 IBA57-AS1B1ANH7 110 aa7.19□□□□□ -1.26
VIPAS39-203ENST00000448935 TSPAN13O95857 204 aa7.19□□□□□ -1.26
VIPAS39-203ENST00000448935 ESRGQ1W209 222 aa7.19□□□□□ -1.26
VIPAS39-203ENST00000448935 LINC00308Q8TCZ7 52 aa7.19□□□□□ -1.26
VIPAS39-203ENST00000448935 ERG28Q9UKR5 140 aa7.19□□□□□ -1.26
VIPAS39-203ENST00000448935 IGLV10-54A0A075B6I4 117 aa7.18□□□□□ -1.26
VIPAS39-203ENST00000448935 IGHV3-33P01772 117 aa7.18□□□□□ -1.26
VIPAS39-203ENST00000448935 CKS1BP61024 79 aa7.18□□□□□ -1.26
VIPAS39-203ENST00000448935 FOXI1Q12951 378 aa7.18□□□□□ -1.26
VIPAS39-203ENST00000448935 WFDC10BQ8IUB3 73 aa7.18□□□□□ -1.26
VIPAS39-203ENST00000448935 Q8N3U1 123 aa7.18□□□□□ -1.26
VIPAS39-203ENST00000448935 GAGE12HA6NDE8 117 aa7.17□□□□□ -1.26
VIPAS39-203ENST00000448935 LINC01556Q5JQF7 62 aa7.17□□□□□ -1.26
VIPAS39-203ENST00000448935 B9D2Q9BPU9 175 aa7.17□□□□□ -1.26
VIPAS39-203ENST00000448935 KLK5Q9Y337 293 aaPredicted RBP7.17□□□□□ -1.26
VIPAS39-203ENST00000448935 LOC107984156A0A0G2JMH3 177 aa7.16□□□□□ -1.26
VIPAS39-203ENST00000448935 LINC00158P58513 81 aa7.16□□□□□ -1.26
VIPAS39-203ENST00000448935 NPC2P61916 151 aa7.16□□□□□ -1.26
VIPAS39-203ENST00000448935 Q1RN00 199 aa7.16□□□□□ -1.26
VIPAS39-203ENST00000448935 ENHOQ6UWT2 76 aa7.16□□□□□ -1.26
VIPAS39-203ENST00000448935 ARL17AQ8IVW1 177 aa7.16□□□□□ -1.26
VIPAS39-203ENST00000448935 DAND5Q8N907 189 aa7.16□□□□□ -1.26
VIPAS39-203ENST00000448935 UBE2WQ96B02 151 aa7.16□□□□□ -1.26
VIPAS39-203ENST00000448935 CMYA5Q8N3K9 4069 aa7.16□□□□□ -1.26
VIPAS39-203ENST00000448935 TRBV20-1A0A075B6N2 111 aa7.16□□□□□ -1.26
VIPAS39-203ENST00000448935 A0A0U1RRA0 63 aa7.16□□□□□ -1.26
VIPAS39-203ENST00000448935 PSMB2P49721 201 aa7.15□□□□□ -1.27
VIPAS39-203ENST00000448935 CCL18P55774 89 aa7.15□□□□□ -1.27
VIPAS39-203ENST00000448935 COX17Q14061 63 aa7.15□□□□□ -1.27
VIPAS39-203ENST00000448935 MIR7-3HGQ8N6C7 128 aa7.15□□□□□ -1.27
VIPAS39-203ENST00000448935 COX6CP09669 75 aa7.14□□□□□ -1.27
VIPAS39-203ENST00000448935 SCGB1C2P0DMR2 95 aa7.14□□□□□ -1.27
VIPAS39-203ENST00000448935 KIAA0087Q14695 138 aa7.14□□□□□ -1.27
VIPAS39-203ENST00000448935 MUC7Q8TAX7 377 aa7.14□□□□□ -1.27
VIPAS39-203ENST00000448935 DNAH3Q8TD57 4116 aa7.14□□□□□ -1.27
VIPAS39-203ENST00000448935 TRBV30A0A0K0K1B3 111 aa7.13□□□□□ -1.27
VIPAS39-203ENST00000448935 NHLRC4P0CG21 123 aaPredicted RBP7.13□□□□□ -1.27
VIPAS39-203ENST00000448935 DNAH10OSP0CZ25 163 aa7.13□□□□□ -1.27
VIPAS39-203ENST00000448935 SPAG11BQ08648 103 aa7.13□□□□□ -1.27
VIPAS39-203ENST00000448935 F8W1H4 67 aa7.12□□□□□ -1.27
VIPAS39-203ENST00000448935 PFN2P35080 140 aa7.12□□□□□ -1.27
VIPAS39-203ENST00000448935 SOSTDC1Q6X4U4 206 aa7.12□□□□□ -1.27
VIPAS39-203ENST00000448935 TRAV13-2A0A0B4J235 113 aa7.12□□□□□ -1.27
VIPAS39-203ENST00000448935 H7C2G1 150 aa7.12□□□□□ -1.27
VIPAS39-203ENST00000448935 RPL13AP40429 203 aaKnown RBP7.12□□□□□ -1.27
VIPAS39-203ENST00000448935 NOTCH1P46531 2555 aa7.11□□□□□ -1.27
VIPAS39-203ENST00000448935 ANK2Q01484 3957 aa7.11□□□□□ -1.27
VIPAS39-203ENST00000448935 H3BMG7 143 aa7.11□□□□□ -1.27
VIPAS39-203ENST00000448935 C2orf82Q6UX34 121 aa7.11□□□□□ -1.27
VIPAS39-203ENST00000448935 SND1-IT1Q9HBX3 110 aa7.11□□□□□ -1.27
VIPAS39-203ENST00000448935 UPK3BQ9BT76 320 aa7.1□□□□□ -1.27
VIPAS39-203ENST00000448935 LINC00588Q9Y4M8 146 aa7.1□□□□□ -1.27
VIPAS39-203ENST00000448935 F8WDY8 70 aa7.09□□□□□ -1.27
VIPAS39-203ENST00000448935 RMI2Q96E14 147 aa7.09□□□□□ -1.27
VIPAS39-203ENST00000448935 TENM3Q9P273 2699 aa7.09□□□□□ -1.27
VIPAS39-203ENST00000448935 GVQW2A0A096LPI5 108 aaPredicted RBP7.09□□□□□ -1.28
VIPAS39-203ENST00000448935 ATXN8Q156A1 80 aa7.09□□□□□ -1.28
VIPAS39-203ENST00000448935 TCL1BO95988 128 aa7.08□□□□□ -1.28
VIPAS39-203ENST00000448935 KRTAP26-1Q6PEX3 210 aa7.08□□□□□ -1.28
VIPAS39-203ENST00000448935 NTN5Q8WTR8 489 aaPredicted RBP7.08□□□□□ -1.28
VIPAS39-203ENST00000448935 IGKV2D-24A0A075B6R9 120 aa7.07□□□□□ -1.28
VIPAS39-203ENST00000448935 NDUFC2O95298 119 aa7.07□□□□□ -1.28
VIPAS39-203ENST00000448935 C2orf48Q96LS8 159 aa7.07□□□□□ -1.28
VIPAS39-203ENST00000448935 MGAM2Q2M2H8 2515 aa7.06□□□□□ -1.28
VIPAS39-203ENST00000448935 KRTAP23-1A1A580 65 aa7.05□□□□□ -1.28
VIPAS39-203ENST00000448935 UNQ6190/PRO20217Q6UXQ8 127 aa7.05□□□□□ -1.28
VIPAS39-203ENST00000448935 CAMK2N2Q96S95 79 aa7.05□□□□□ -1.28
VIPAS39-203ENST00000448935 NUPR2A6NF83 97 aa7.05□□□□□ -1.28
VIPAS39-203ENST00000448935 K7ERU9 68 aa7.05□□□□□ -1.28
VIPAS39-203ENST00000448935 C6orf223Q8N319 242 aa7.05□□□□□ -1.28
VIPAS39-203ENST00000448935 IGKV2-28A0A075B6P5 120 aa7.04□□□□□ -1.28
VIPAS39-203ENST00000448935 IGKV2D-28P01615 120 aa7.04□□□□□ -1.28
VIPAS39-203ENST00000448935 RPL28P46779 137 aaKnown RBP7.04□□□□□ -1.28
VIPAS39-203ENST00000448935 Q9HAA7 133 aa7.04□□□□□ -1.28
VIPAS39-203ENST00000448935 PRO0461Q9UI25 63 aa7.04□□□□□ -1.28
VIPAS39-203ENST00000448935 M0QXV9 152 aa7.03□□□□□ -1.28
VIPAS39-203ENST00000448935 WFDC2Q14508 124 aa7.03□□□□□ -1.28
VIPAS39-203ENST00000448935 HIGD2BQ4VC39 106 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms