RNA–Protein interactions for RNA: ENST00000448879.5

SEMA3A-205, Transcript of semaphorin 3A, humanhuman

TSL 5

Gene SEMA3A, Length 534 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3A-205ENST00000448879 LINC01006Q8NI28 216 aa3.35□□□□□ -1.87
SEMA3A-205ENST00000448879 TMEM263Q8WUH6 116 aaKnown RBP3.35□□□□□ -1.87
SEMA3A-205ENST00000448879 LINC01600Q96MT4 127 aa3.35□□□□□ -1.87
SEMA3A-205ENST00000448879 V9GYY9 64 aa3.35□□□□□ -1.87
SEMA3A-205ENST00000448879 NBEAL2Q6ZNJ1 2754 aa3.34□□□□□ -1.87
SEMA3A-205ENST00000448879 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.34□□□□□ -1.87
SEMA3A-205ENST00000448879 IGHV3OR16-12A0A075B7B8 117 aa3.34□□□□□ -1.87
SEMA3A-205ENST00000448879 TRAV8-3A0A0A6YYJ7 113 aa3.34□□□□□ -1.87
SEMA3A-205ENST00000448879 TRAV4A0A0B4J268 109 aa3.34□□□□□ -1.87
SEMA3A-205ENST00000448879 IGHV1-58A0A0C4DH39 117 aa3.34□□□□□ -1.87
SEMA3A-205ENST00000448879 IGKV2-29A2NJV5 120 aaPredicted RBP3.34□□□□□ -1.87
SEMA3A-205ENST00000448879 H3BMG7 143 aa3.34□□□□□ -1.87
SEMA3A-205ENST00000448879 TCL1BO95988 128 aa3.34□□□□□ -1.87
SEMA3A-205ENST00000448879 IGLV1-51P01701 117 aa3.34□□□□□ -1.87
SEMA3A-205ENST00000448879 RNASE13Q5GAN3 156 aaKnown RBP3.34□□□□□ -1.87
SEMA3A-205ENST00000448879 ZFAND6Q6FIF0 208 aa3.34□□□□□ -1.87
SEMA3A-205ENST00000448879 NTM-AS1Q6ZSK4 140 aa3.34□□□□□ -1.87
SEMA3A-205ENST00000448879 Q6ZTI0 123 aa3.34□□□□□ -1.87
SEMA3A-205ENST00000448879 CSNK1G2-AS1Q8NCQ2 148 aa3.34□□□□□ -1.87
SEMA3A-205ENST00000448879 ATP6V0E2Q8NHE4 81 aa3.34□□□□□ -1.87
SEMA3A-205ENST00000448879 VSIG2Q96IQ7 327 aa3.34□□□□□ -1.87
SEMA3A-205ENST00000448879 LINC01587Q99440 93 aa3.34□□□□□ -1.87
SEMA3A-205ENST00000448879 VPS25Q9BRG1 176 aa3.34□□□□□ -1.87
SEMA3A-205ENST00000448879 SPANXDQ9BXN6 97 aa3.34□□□□□ -1.87
SEMA3A-205ENST00000448879 SPANXCQ9NY87 97 aa3.34□□□□□ -1.87
SEMA3A-205ENST00000448879 XCL2Q9UBD3 114 aa3.34□□□□□ -1.87
SEMA3A-205ENST00000448879 IGHV3-38A0A0C4DH36 116 aa3.33□□□□□ -1.88
SEMA3A-205ENST00000448879 TRBV10-1A0A0K0K1A3 114 aa3.33□□□□□ -1.88
SEMA3A-205ENST00000448879 K7EQD1 137 aa3.33□□□□□ -1.88
SEMA3A-205ENST00000448879 TIMM17BO60830 172 aa3.33□□□□□ -1.88
SEMA3A-205ENST00000448879 APOMO95445 188 aa3.33□□□□□ -1.88
SEMA3A-205ENST00000448879 HTN1P15515 57 aa3.33□□□□□ -1.88
SEMA3A-205ENST00000448879 RPL13AP40429 203 aaKnown RBP3.33□□□□□ -1.88
SEMA3A-205ENST00000448879 INSL3P51460 131 aa3.33□□□□□ -1.88
SEMA3A-205ENST00000448879 DAZ2Q13117 558 aaKnown RBP3.33□□□□□ -1.88
SEMA3A-205ENST00000448879 SRSF9Q13242 221 aaKnown RBP eCLIP3.33□□□□□ -1.88
SEMA3A-205ENST00000448879 ETDBQ3ZM63 59 aa3.33□□□□□ -1.88
SEMA3A-205ENST00000448879 WFDC10AQ9H1F0 79 aa3.33□□□□□ -1.88
SEMA3A-205ENST00000448879 PRO1854Q9UHT4 67 aa3.33□□□□□ -1.88
SEMA3A-205ENST00000448879 DNAH3Q8TD57 4116 aa3.33□□□□□ -1.88
SEMA3A-205ENST00000448879 CMYA5Q8N3K9 4069 aa3.32□□□□□ -1.88
SEMA3A-205ENST00000448879 IGHV3-64A0A075B6Q5 118 aa3.32□□□□□ -1.88
SEMA3A-205ENST00000448879 F5H768 121 aa3.32□□□□□ -1.88
SEMA3A-205ENST00000448879 NDUFA1O15239 70 aa3.32□□□□□ -1.88
SEMA3A-205ENST00000448879 CDK2AP2O75956 126 aa3.32□□□□□ -1.88
SEMA3A-205ENST00000448879 SPINK8P0C7L1 97 aa3.32□□□□□ -1.88
SEMA3A-205ENST00000448879 MIAQ16674 131 aa3.32□□□□□ -1.88
SEMA3A-205ENST00000448879 LINC00242Q5T6M2 205 aa3.32□□□□□ -1.88
SEMA3A-205ENST00000448879 LYRM7Q5U5X0 104 aa3.32□□□□□ -1.88
SEMA3A-205ENST00000448879 LINC00336Q6ZUF6 198 aa3.32□□□□□ -1.88
SEMA3A-205ENST00000448879 MUSTN1Q8IVN3 82 aa3.32□□□□□ -1.88
SEMA3A-205ENST00000448879 CARD19Q96LW7 228 aa3.32□□□□□ -1.88
SEMA3A-205ENST00000448879 OVOL2Q9BRP0 275 aa3.32□□□□□ -1.88
SEMA3A-205ENST00000448879 CDKN2A-AS1Q9UH64 79 aa3.32□□□□□ -1.88
SEMA3A-205ENST00000448879 NDUFA12Q9UI09 145 aa3.32□□□□□ -1.88
SEMA3A-205ENST00000448879 TENM3Q9P273 2699 aa3.31□□□□□ -1.88
SEMA3A-205ENST00000448879 TRBV20-1A0A075B6N2 111 aa3.31□□□□□ -1.88
SEMA3A-205ENST00000448879 TRGV1A0A0A0MS02 117 aa3.31□□□□□ -1.88
SEMA3A-205ENST00000448879 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.31□□□□□ -1.88
SEMA3A-205ENST00000448879 COX6A2Q02221 97 aa3.31□□□□□ -1.88
SEMA3A-205ENST00000448879 TEN1Q86WV5 123 aa3.31□□□□□ -1.88
SEMA3A-205ENST00000448879 C16orf74Q96GX8 76 aa3.31□□□□□ -1.88
SEMA3A-205ENST00000448879 ZNF625Q96I27 306 aaPredicted RBP3.31□□□□□ -1.88
SEMA3A-205ENST00000448879 TMEM101Q96IK0 257 aa3.31□□□□□ -1.88
SEMA3A-205ENST00000448879 PPDPFQ9H3Y8 114 aa3.31□□□□□ -1.88
SEMA3A-205ENST00000448879 Q9H8V8 135 aa3.31□□□□□ -1.88
SEMA3A-205ENST00000448879 F8P00451 2351 aa3.3□□□□□ -1.88
SEMA3A-205ENST00000448879 LOC107984156A0A0G2JMH3 177 aa3.3□□□□□ -1.88
SEMA3A-205ENST00000448879 TRBV30A0A0K0K1B3 111 aa3.3□□□□□ -1.88
SEMA3A-205ENST00000448879 TRBV6-4A0A1B0GX49 114 aa3.3□□□□□ -1.88
SEMA3A-205ENST00000448879 PSMB2P49721 201 aa3.3□□□□□ -1.88
SEMA3A-205ENST00000448879 CMC4P56277 68 aaPredicted RBP3.3□□□□□ -1.88
SEMA3A-205ENST00000448879 HERVK_113P63121 156 aa3.3□□□□□ -1.88
SEMA3A-205ENST00000448879 SFTA2Q6UW10 78 aa3.3□□□□□ -1.88
SEMA3A-205ENST00000448879 SOSTDC1Q6X4U4 206 aa3.3□□□□□ -1.88
SEMA3A-205ENST00000448879 DAZ4Q86SG3 579 aaKnown RBP3.3□□□□□ -1.88
SEMA3A-205ENST00000448879 ARL17AQ8IVW1 177 aa3.3□□□□□ -1.88
SEMA3A-205ENST00000448879 GTSF1LQ9H1H1 148 aa3.3□□□□□ -1.88
SEMA3A-205ENST00000448879 DAZ3Q9NR90 486 aaKnown RBP3.3□□□□□ -1.88
SEMA3A-205ENST00000448879 CDC42SE2Q9NRR3 84 aa3.3□□□□□ -1.88
SEMA3A-205ENST00000448879 STAB1Q9NY15 2570 aa3.29□□□□□ -1.88
SEMA3A-205ENST00000448879 LOC100131303A0A0U1RQF7 123 aa3.29□□□□□ -1.88
SEMA3A-205ENST00000448879 J3QKU1 62 aa3.29□□□□□ -1.88
SEMA3A-205ENST00000448879 IFITM1P13164 125 aa3.29□□□□□ -1.88
SEMA3A-205ENST00000448879 KRTAP5-5Q701N2 237 aaPredicted RBP3.29□□□□□ -1.88
SEMA3A-205ENST00000448879 KRTAP11-1Q8IUC1 163 aa3.29□□□□□ -1.88
SEMA3A-205ENST00000448879 ANKRD29Q8N6D5 301 aa3.29□□□□□ -1.88
SEMA3A-205ENST00000448879 KIR2DL5BQ8NHK3 375 aa3.29□□□□□ -1.88
SEMA3A-205ENST00000448879 C11orf45Q8TAV5 145 aa3.29□□□□□ -1.88
SEMA3A-205ENST00000448879 PPDPFLQ8WWR9 84 aa3.29□□□□□ -1.88
SEMA3A-205ENST00000448879 TMEM243Q9BU79 118 aa3.29□□□□□ -1.88
SEMA3A-205ENST00000448879 NOP10Q9NPE3 64 aaKnown RBP3.29□□□□□ -1.88
SEMA3A-205ENST00000448879 ERG28Q9UKR5 140 aa3.29□□□□□ -1.88
SEMA3A-205ENST00000448879 J3QR89 54 aa3.28□□□□□ -1.88
SEMA3A-205ENST00000448879 SLC25A20O43772 301 aa3.28□□□□□ -1.88
SEMA3A-205ENST00000448879 RPL35AP18077 110 aaKnown RBP3.28□□□□□ -1.88
SEMA3A-205ENST00000448879 XGP55808 180 aa3.28□□□□□ -1.88
SEMA3A-205ENST00000448879 LINC00308Q8TCZ7 52 aa3.28□□□□□ -1.88
SEMA3A-205ENST00000448879 ZNF418Q8TF45 676 aaPredicted RBP3.28□□□□□ -1.88
SEMA3A-205ENST00000448879 ICOSQ9Y6W8 199 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms