RNA–Protein interactions for RNA: ENST00000448116.6

SHC1-210, Transcript of SHC adaptor protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SHC1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-210ENST00000448116 PAX4O43316 350 aa9.07□□□□□ -0.96
SHC1-210ENST00000448116 CYSTM1Q9H1C7 97 aa9.07□□□□□ -0.96
SHC1-210ENST00000448116 HELZ2Q9BYK8 2649 aaKnown RBP9.07□□□□□ -0.96
SHC1-210ENST00000448116 CMC4P56277 68 aaPredicted RBP9.06□□□□□ -0.96
SHC1-210ENST00000448116 FHL2Q14192 279 aa9.06□□□□□ -0.96
SHC1-210ENST00000448116 DEFB121Q5J5C9 76 aa9.06□□□□□ -0.96
SHC1-210ENST00000448116 GCN1Q92616 2671 aaKnown RBP9.06□□□□□ -0.96
SHC1-210ENST00000448116 ATP5G1P05496 136 aa9.06□□□□□ -0.96
SHC1-210ENST00000448116 XCL1P47992 114 aa9.06□□□□□ -0.96
SHC1-210ENST00000448116 C6orf226Q5I0X4 101 aa9.06□□□□□ -0.96
SHC1-210ENST00000448116 DNAL4O96015 105 aa9.06□□□□□ -0.96
SHC1-210ENST00000448116 IGLV1-51P01701 117 aa9.06□□□□□ -0.96
SHC1-210ENST00000448116 TRACP01848 142 aa9.06□□□□□ -0.96
SHC1-210ENST00000448116 Q6Q795 121 aa9.06□□□□□ -0.96
SHC1-210ENST00000448116 FAM240AA0A1B0GVK7 77 aa9.05□□□□□ -0.96
SHC1-210ENST00000448116 CCL18P55774 89 aa9.05□□□□□ -0.96
SHC1-210ENST00000448116 C19orf73Q9NVV2 129 aa9.05□□□□□ -0.96
SHC1-210ENST00000448116 IGKV2-28A0A075B6P5 120 aa9.04□□□□□ -0.96
SHC1-210ENST00000448116 IGKV2D-28P01615 120 aa9.04□□□□□ -0.96
SHC1-210ENST00000448116 TENM4Q6N022 2769 aa9.04□□□□□ -0.96
SHC1-210ENST00000448116 NBPF19A0A087WUL8 3843 aa9.04□□□□□ -0.96
SHC1-210ENST00000448116 IGHV3OR16-9A0A0B4J2B5 98 aa9.04□□□□□ -0.96
SHC1-210ENST00000448116 A0A1B0GX51 115 aa9.04□□□□□ -0.96
SHC1-210ENST00000448116 C3orf22Q8N5N4 141 aa9.04□□□□□ -0.96
SHC1-210ENST00000448116 CSNK1G2-AS1Q8NCQ2 148 aa9.04□□□□□ -0.96
SHC1-210ENST00000448116 SMIM11BQ8TCY0 68 aa9.04□□□□□ -0.96
SHC1-210ENST00000448116 GYPEP15421 78 aa9.04□□□□□ -0.96
SHC1-210ENST00000448116 C4orf48Q5BLP8 95 aa9.03□□□□□ -0.96
SHC1-210ENST00000448116 OVOL2Q9BRP0 275 aa9.03□□□□□ -0.96
SHC1-210ENST00000448116 DPH3Q96FX2 82 aa9.03□□□□□ -0.96
SHC1-210ENST00000448116 A0A087WYN8 130 aa9.03□□□□□ -0.96
SHC1-210ENST00000448116 RPL28P46779 137 aaKnown RBP9.02□□□□□ -0.97
SHC1-210ENST00000448116 LINC00482Q8N8I6 264 aa9.02□□□□□ -0.97
SHC1-210ENST00000448116 SMCR5Q8TEV8 140 aa9.02□□□□□ -0.97
SHC1-210ENST00000448116 ZNF561-AS1K7EIQ3 104 aa9.02□□□□□ -0.97
SHC1-210ENST00000448116 BRK1Q8WUW1 75 aa9.02□□□□□ -0.97
SHC1-210ENST00000448116 AKAP9Q99996 3911 aa9.02□□□□□ -0.97
SHC1-210ENST00000448116 LINC00959A0A1B0GUT2 108 aa9.01□□□□□ -0.97
SHC1-210ENST00000448116 HECTD1Q9ULT8 2610 aa9.01□□□□□ -0.97
SHC1-210ENST00000448116 PF4P02776 101 aa9.01□□□□□ -0.97
SHC1-210ENST00000448116 ACYP1P07311 99 aa9.01□□□□□ -0.97
SHC1-210ENST00000448116 SLPIP03973 132 aa9.01□□□□□ -0.97
SHC1-210ENST00000448116 ITPR2Q14571 2701 aa9.01□□□□□ -0.97
SHC1-210ENST00000448116 A0A087WZ39 114 aa9□□□□□ -0.97
SHC1-210ENST00000448116 LECT2O14960 151 aa9□□□□□ -0.97
SHC1-210ENST00000448116 DEFB4AO15263 64 aa9□□□□□ -0.97
SHC1-210ENST00000448116 C22orf24Q9Y442 160 aa9□□□□□ -0.97
SHC1-210ENST00000448116 IBA57-AS1B1ANH7 110 aa8.99□□□□□ -0.97
SHC1-210ENST00000448116 RNASE1P07998 156 aaKnown RBP8.99□□□□□ -0.97
SHC1-210ENST00000448116 FAM222AQ5U5X8 452 aa8.99□□□□□ -0.97
SHC1-210ENST00000448116 LINC01561Q8N1V8 128 aa8.99□□□□□ -0.97
SHC1-210ENST00000448116 C14orf132Q9NPU4 83 aa8.99□□□□□ -0.97
SHC1-210ENST00000448116 INAFM2P0DMQ5 153 aa8.99□□□□□ -0.97
SHC1-210ENST00000448116 SS18Q15532 418 aa8.99□□□□□ -0.97
SHC1-210ENST00000448116 IGLV10-54A0A075B6I4 117 aa8.98□□□□□ -0.97
SHC1-210ENST00000448116 C9orf129Q5T035 196 aaKnown RBP8.98□□□□□ -0.97
SHC1-210ENST00000448116 LINC00643Q86TS7 51 aa8.98□□□□□ -0.97
SHC1-210ENST00000448116 TRBV7-7A0A0K0K1E9 115 aa8.98□□□□□ -0.97
SHC1-210ENST00000448116 PRR3P79522 188 aaKnown RBP8.98□□□□□ -0.97
SHC1-210ENST00000448116 RPS28P62857 69 aaKnown RBP8.97□□□□□ -0.97
SHC1-210ENST00000448116 SMR3AQ99954 134 aa8.97□□□□□ -0.97
SHC1-210ENST00000448116 UQCRQO14949 82 aa8.96□□□□□ -0.97
SHC1-210ENST00000448116 C16orf95Q9H693 158 aa8.96□□□□□ -0.97
SHC1-210ENST00000448116 KRTAP1-1Q07627 177 aa8.96□□□□□ -0.98
SHC1-210ENST00000448116 H0YGX0 51 aa8.96□□□□□ -0.98
SHC1-210ENST00000448116 NCR3O14931 201 aa8.95□□□□□ -0.98
SHC1-210ENST00000448116 LINC00526Q96FQ7 95 aa8.95□□□□□ -0.98
SHC1-210ENST00000448116 LINC00269Q8N2A0 174 aa8.95□□□□□ -0.98
SHC1-210ENST00000448116 Q8N3U1 123 aa8.94□□□□□ -0.98
SHC1-210ENST00000448116 PRO0255Q9UI72 69 aa8.94□□□□□ -0.98
SHC1-210ENST00000448116 IGKV3D-7A0A0C4DH55 119 aa8.93□□□□□ -0.98
SHC1-210ENST00000448116 ANGP03950 147 aaKnown RBP8.93□□□□□ -0.98
SHC1-210ENST00000448116 KMT2BQ9UMN6 2715 aaPredicted RBP8.93□□□□□ -0.98
SHC1-210ENST00000448116 HTN3P15516 51 aa8.93□□□□□ -0.98
SHC1-210ENST00000448116 DEFB135Q30KP9 77 aa8.92□□□□□ -0.98
SHC1-210ENST00000448116 C9orf116Q5BN46 136 aaPredicted RBP8.92□□□□□ -0.98
SHC1-210ENST00000448116 SDIM1Q6ZPB5 146 aa8.92□□□□□ -0.98
SHC1-210ENST00000448116 FLNBO75369 2602 aaKnown RBP8.92□□□□□ -0.98
SHC1-210ENST00000448116 IMUPQ9GZP8 106 aa8.92□□□□□ -0.98
SHC1-210ENST00000448116 HILS1P60008 231 aa8.91□□□□□ -0.98
SHC1-210ENST00000448116 KRTAP10-3P60369 221 aa8.91□□□□□ -0.98
SHC1-210ENST00000448116 X6R8D5 127 aa8.91□□□□□ -0.98
SHC1-210ENST00000448116 SPATA3Q8NHX4 192 aa8.9□□□□□ -0.98
SHC1-210ENST00000448116 FAM19A1Q7Z5A9 133 aa8.9□□□□□ -0.99
SHC1-210ENST00000448116 Q8IZM0 81 aa8.9□□□□□ -0.99
SHC1-210ENST00000448116 CHCHD10Q8WYQ3 142 aaPredicted RBP8.89□□□□□ -0.99
SHC1-210ENST00000448116 ORMDL1Q9P0S3 153 aa8.89□□□□□ -0.99
SHC1-210ENST00000448116 A0A1B0GUV1 79 aa8.89□□□□□ -0.99
SHC1-210ENST00000448116 LINC00846Q9NV44 126 aa8.89□□□□□ -0.99
SHC1-210ENST00000448116 VWFP04275 2813 aa8.88□□□□□ -0.99
SHC1-210ENST00000448116 PDZD2O15018 2839 aa8.87□□□□□ -0.99
SHC1-210ENST00000448116 UNC79Q9P2D8 2635 aa8.87□□□□□ -0.99
SHC1-210ENST00000448116 DAD1P61803 113 aa8.87□□□□□ -0.99
SHC1-210ENST00000448116 REG3AQ06141 175 aa8.87□□□□□ -0.99
SHC1-210ENST00000448116 COX7CP15954 63 aa8.86□□□□□ -0.99
SHC1-210ENST00000448116 CD164L2Q6UWJ8 174 aa8.86□□□□□ -0.99
SHC1-210ENST00000448116 LINC00612Q8N6U2 182 aa8.86□□□□□ -0.99
SHC1-210ENST00000448116 S100A7L2Q5SY68 101 aa8.85□□□□□ -0.99
SHC1-210ENST00000448116 CXCL5P42830 114 aa8.85□□□□□ -0.99
SHC1-210ENST00000448116 A0A087WVE0 104 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms