RNA–Protein interactions for RNA: ENST00000446225.5

MCF2-206, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene MCF2, Length 1,916 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-206ENST00000446225 COL7A1Q02388 2944 aa4.1□□□□□ -1.75
MCF2-206ENST00000446225 H3BMM0 161 aa4.09□□□□□ -1.75
MCF2-206ENST00000446225 DIRC1Q969H9 104 aa4.09□□□□□ -1.75
MCF2-206ENST00000446225 KRTAP4-11Q9BYQ6 195 aa4.09□□□□□ -1.75
MCF2-206ENST00000446225 GFRA4Q9GZZ7 299 aa4.09□□□□□ -1.75
MCF2-206ENST00000446225 TMEM14CQ9P0S9 112 aa4.09□□□□□ -1.75
MCF2-206ENST00000446225 ZNF705FA8MVS1 300 aaPredicted RBP4.09□□□□□ -1.76
MCF2-206ENST00000446225 ZNF705BP0CI00 300 aaPredicted RBP4.09□□□□□ -1.76
MCF2-206ENST00000446225 LGALSLQ3ZCW2 172 aaPredicted RBP4.09□□□□□ -1.76
MCF2-206ENST00000446225 CELA1Q9UNI1 258 aa4.09□□□□□ -1.76
MCF2-206ENST00000446225 U3KQK5 164 aa4.09□□□□□ -1.76
MCF2-206ENST00000446225 TENM3Q9P273 2699 aa4.09□□□□□ -1.76
MCF2-206ENST00000446225 A0A0J9YX75 114 aa4.08□□□□□ -1.76
MCF2-206ENST00000446225 FXYD7P58549 80 aa4.08□□□□□ -1.76
MCF2-206ENST00000446225 ZNF345Q14585 488 aa4.08□□□□□ -1.76
MCF2-206ENST00000446225 AGRNO00468 2067 aa4.08□□□□□ -1.76
MCF2-206ENST00000446225 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.07□□□□□ -1.76
MCF2-206ENST00000446225 K7ERS5 55 aa4.07□□□□□ -1.76
MCF2-206ENST00000446225 SNCGO76070 127 aa4.07□□□□□ -1.76
MCF2-206ENST00000446225 ASIPP42127 132 aa4.07□□□□□ -1.76
MCF2-206ENST00000446225 SERF2P84101 59 aa4.07□□□□□ -1.76
MCF2-206ENST00000446225 DEFB135Q30KP9 77 aa4.07□□□□□ -1.76
MCF2-206ENST00000446225 SLC50A1Q9BRV3 221 aa4.07□□□□□ -1.76
MCF2-206ENST00000446225 OSTCQ9NRP0 149 aa4.07□□□□□ -1.76
MCF2-206ENST00000446225 KANTRA0A1W2PQU2 76 aa4.07□□□□□ -1.76
MCF2-206ENST00000446225 M0R3E3 92 aa4.07□□□□□ -1.76
MCF2-206ENST00000446225 LEPROTO15243 131 aa4.07□□□□□ -1.76
MCF2-206ENST00000446225 NPC2P61916 151 aa4.07□□□□□ -1.76
MCF2-206ENST00000446225 MRPS36P82909 103 aaKnown RBP4.07□□□□□ -1.76
MCF2-206ENST00000446225 FAM104BQ5XKR9 115 aa4.07□□□□□ -1.76
MCF2-206ENST00000446225 SPATA12Q7Z6I5 190 aa4.07□□□□□ -1.76
MCF2-206ENST00000446225 AMN1Q8IY45 258 aa4.07□□□□□ -1.76
MCF2-206ENST00000446225 STAB2Q8WWQ8 2551 aa4.06□□□□□ -1.76
MCF2-206ENST00000446225 A0A096LNJ9 63 aa4.06□□□□□ -1.76
MCF2-206ENST00000446225 COX7CP15954 63 aa4.06□□□□□ -1.76
MCF2-206ENST00000446225 UBE2L3P68036 154 aaKnown RBP4.06□□□□□ -1.76
MCF2-206ENST00000446225 PDE6HQ13956 83 aa4.06□□□□□ -1.76
MCF2-206ENST00000446225 A8MTW9 85 aa4.05□□□□□ -1.76
MCF2-206ENST00000446225 ZNF861PO60384 105 aa4.05□□□□□ -1.76
MCF2-206ENST00000446225 ARL14EPLP0DKL9 152 aa4.05□□□□□ -1.76
MCF2-206ENST00000446225 GCHFRP30047 84 aa4.05□□□□□ -1.76
MCF2-206ENST00000446225 HIST1H4AP62805 103 aaKnown RBP4.05□□□□□ -1.76
MCF2-206ENST00000446225 XAGE1AQ9HD64 81 aa4.05□□□□□ -1.76
MCF2-206ENST00000446225 PHLDA3Q9Y5J5 127 aa4.05□□□□□ -1.76
MCF2-206ENST00000446225 GRIFINA4D1Z8 144 aa4.05□□□□□ -1.76
MCF2-206ENST00000446225 SPINK13Q1W4C9 94 aa4.05□□□□□ -1.76
MCF2-206ENST00000446225 DEFB116Q30KQ4 102 aa4.05□□□□□ -1.76
MCF2-206ENST00000446225 IGKV2-40A0A087WW87 121 aaPredicted RBP4.04□□□□□ -1.76
MCF2-206ENST00000446225 CTXND1A0A1B0GTU2 59 aa4.04□□□□□ -1.76
MCF2-206ENST00000446225 RBAKDNA6NC62 111 aa4.04□□□□□ -1.76
MCF2-206ENST00000446225 DEFB4AO15263 64 aa4.04□□□□□ -1.76
MCF2-206ENST00000446225 IGKV2D-40P01614 121 aaPredicted RBP4.04□□□□□ -1.76
MCF2-206ENST00000446225 TSPEAR-AS2P59090 65 aa4.04□□□□□ -1.76
MCF2-206ENST00000446225 LYPD1Q8N2G4 141 aa4.04□□□□□ -1.76
MCF2-206ENST00000446225 CYB561D1Q8N8Q1 229 aa4.04□□□□□ -1.76
MCF2-206ENST00000446225 FAM213BQ8TBF2 198 aa4.04□□□□□ -1.76
MCF2-206ENST00000446225 MRPL51Q4U2R6 128 aaKnown RBP4.03□□□□□ -1.76
MCF2-206ENST00000446225 FP248Q71RG6 208 aaPredicted RBP4.03□□□□□ -1.76
MCF2-206ENST00000446225 DSCR8Q96T75 97 aa4.03□□□□□ -1.76
MCF2-206ENST00000446225 TMEM167BQ9NRX6 74 aa4.03□□□□□ -1.76
MCF2-206ENST00000446225 DNAH7Q8WXX0 4024 aa4.03□□□□□ -1.76
MCF2-206ENST00000446225 UMAD1C9J7I0 102 aa4.03□□□□□ -1.76
MCF2-206ENST00000446225 ADIRFQ15847 76 aa4.03□□□□□ -1.76
MCF2-206ENST00000446225 DPPA3Q6W0C5 159 aa4.03□□□□□ -1.76
MCF2-206ENST00000446225 MIR7-3HGQ8N6C7 128 aa4.03□□□□□ -1.76
MCF2-206ENST00000446225 ZFAND2AQ8N6M9 145 aa4.03□□□□□ -1.76
MCF2-206ENST00000446225 Q8NAQ8 132 aa4.03□□□□□ -1.76
MCF2-206ENST00000446225 CMTM2Q8TAZ6 248 aa4.03□□□□□ -1.76
MCF2-206ENST00000446225 DPH3P1Q9H4G8 78 aa4.03□□□□□ -1.76
MCF2-206ENST00000446225 Q8TAT8 98 aa4.02□□□□□ -1.77
MCF2-206ENST00000446225 ST20Q9HBF5 79 aa4.02□□□□□ -1.77
MCF2-206ENST00000446225 TRAV12-3A0A0B4J271 114 aa4.01□□□□□ -1.77
MCF2-206ENST00000446225 C3orf84H3BNL1 204 aa4.01□□□□□ -1.77
MCF2-206ENST00000446225 TCL1BO95988 128 aa4.01□□□□□ -1.77
MCF2-206ENST00000446225 MIFP14174 115 aa4.01□□□□□ -1.77
MCF2-206ENST00000446225 HINT1P49773 126 aaPredicted RBP4.01□□□□□ -1.77
MCF2-206ENST00000446225 GFI1BQ5VTD9 330 aa4.01□□□□□ -1.77
MCF2-206ENST00000446225 SOSTDC1Q6X4U4 206 aa4.01□□□□□ -1.77
MCF2-206ENST00000446225 Q6ZQT7 251 aa4.01□□□□□ -1.77
MCF2-206ENST00000446225 ADM2Q7Z4H4 148 aa4.01□□□□□ -1.77
MCF2-206ENST00000446225 ODF3Q96PU9 254 aa4.01□□□□□ -1.77
MCF2-206ENST00000446225 HHLA3Q9XRX5 114 aa4.01□□□□□ -1.77
MCF2-206ENST00000446225 A6NED7 52 aa4.01□□□□□ -1.77
MCF2-206ENST00000446225 IGLC3P0DOY3 106 aa4.01□□□□□ -1.77
MCF2-206ENST00000446225 HTN1P15515 57 aa4.01□□□□□ -1.77
MCF2-206ENST00000446225 FUSP35637 526 aaKnown RBP eCLIP4.01□□□□□ -1.77
MCF2-206ENST00000446225 SEC11AP67812 179 aa4.01□□□□□ -1.77
MCF2-206ENST00000446225 PRR9Q5T870 116 aa4.01□□□□□ -1.77
MCF2-206ENST00000446225 MUC7Q8TAX7 377 aa4.01□□□□□ -1.77
MCF2-206ENST00000446225 TVP23CQ96ET8 276 aa4.01□□□□□ -1.77
MCF2-206ENST00000446225 SCGB3A1Q96QR1 104 aa4.01□□□□□ -1.77
MCF2-206ENST00000446225 C20orf78Q9BR46 151 aa4.01□□□□□ -1.77
MCF2-206ENST00000446225 IGLV2-33A0A075B6J2 118 aaPredicted RBP4□□□□□ -1.77
MCF2-206ENST00000446225 TRAV1-1A0A0B4J248 108 aa4□□□□□ -1.77
MCF2-206ENST00000446225 A8MWP4 228 aa4□□□□□ -1.77
MCF2-206ENST00000446225 H3BRM9 83 aa4□□□□□ -1.77
MCF2-206ENST00000446225 IGHV3-30-3P0DP02 117 aa4□□□□□ -1.77
MCF2-206ENST00000446225 CIRBPQ14011 172 aaKnown RBP4□□□□□ -1.77
MCF2-206ENST00000446225 SS18Q15532 418 aa4□□□□□ -1.77
MCF2-206ENST00000446225 TTTY13Q9BZ97 58 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms