RNA–Protein interactions for RNA: ENST00000444942.1

LINC00642-203, long intergenic non-protein coding RNA 642, humanhuman

TSL 1 (best)

Gene LINC00642, Length 1,376 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00642-203ENST00000444942 CSDC2Q9Y534 153 aaKnown RBP6.24□□□□□ -1.41
LINC00642-203ENST00000444942 H3BRM9 83 aa6.23□□□□□ -1.41
LINC00642-203ENST00000444942 UBE2D1P51668 147 aa6.23□□□□□ -1.41
LINC00642-203ENST00000444942 TSPEAR-AS2P59090 65 aa6.23□□□□□ -1.41
LINC00642-203ENST00000444942 LINC00469Q8N7U9 141 aa6.23□□□□□ -1.41
LINC00642-203ENST00000444942 TM2D2Q9BX73 214 aa6.23□□□□□ -1.41
LINC00642-203ENST00000444942 FAT3Q8TDW7 4589 aa6.23□□□□□ -1.41
LINC00642-203ENST00000444942 IGHV3-64A0A075B6Q5 118 aa6.22□□□□□ -1.41
LINC00642-203ENST00000444942 DNAH10OSP0CZ25 163 aa6.22□□□□□ -1.41
LINC00642-203ENST00000444942 FXYD2P54710 66 aa6.22□□□□□ -1.41
LINC00642-203ENST00000444942 TIRAPP58753 221 aa6.22□□□□□ -1.41
LINC00642-203ENST00000444942 Q6ZVH6 145 aa6.22□□□□□ -1.41
LINC00642-203ENST00000444942 Q9HAA7 133 aa6.22□□□□□ -1.41
LINC00642-203ENST00000444942 PKHD1L1Q86WI1 4243 aa6.22□□□□□ -1.41
LINC00642-203ENST00000444942 TRBV6-8A0A0A6YYG3 113 aa6.21□□□□□ -1.41
LINC00642-203ENST00000444942 IGHV1-58A0A0C4DH39 117 aa6.21□□□□□ -1.41
LINC00642-203ENST00000444942 TMEM238LA0A1B0GVL6 79 aa6.21□□□□□ -1.41
LINC00642-203ENST00000444942 A6NJY4 79 aa6.21□□□□□ -1.41
LINC00642-203ENST00000444942 TMEM262E9PQX1 116 aa6.21□□□□□ -1.41
LINC00642-203ENST00000444942 SMIM13P0DJ93 91 aa6.21□□□□□ -1.41
LINC00642-203ENST00000444942 HERVK_113P63121 156 aa6.21□□□□□ -1.41
LINC00642-203ENST00000444942 VAMP3Q15836 100 aa6.21□□□□□ -1.41
LINC00642-203ENST00000444942 SPANXB1Q9NS25 103 aaPredicted RBP6.21□□□□□ -1.41
LINC00642-203ENST00000444942 IGLV5-45A0A087WSX0 123 aa6.2□□□□□ -1.42
LINC00642-203ENST00000444942 C9orf118A6NHY6 69 aa6.2□□□□□ -1.42
LINC00642-203ENST00000444942 GAGE6Q13070 117 aa6.2□□□□□ -1.42
LINC00642-203ENST00000444942 SRSF9Q13242 221 aaKnown RBP eCLIP6.2□□□□□ -1.42
LINC00642-203ENST00000444942 LINC01556Q5JQF7 62 aa6.2□□□□□ -1.42
LINC00642-203ENST00000444942 FAM19A3Q7Z5A8 133 aa6.2□□□□□ -1.42
LINC00642-203ENST00000444942 CHCHD5Q9BSY4 110 aa6.2□□□□□ -1.42
LINC00642-203ENST00000444942 CDC42SE2Q9NRR3 84 aa6.2□□□□□ -1.42
LINC00642-203ENST00000444942 NHP2Q9NX24 153 aaKnown RBP6.2□□□□□ -1.42
LINC00642-203ENST00000444942 SPINK8P0C7L1 97 aa6.19□□□□□ -1.42
LINC00642-203ENST00000444942 FUSP35637 526 aaKnown RBP eCLIP6.19□□□□□ -1.42
LINC00642-203ENST00000444942 RAB37Q96AX2 223 aa6.19□□□□□ -1.42
LINC00642-203ENST00000444942 FAT4Q6V0I7 4981 aa6.19□□□□□ -1.42
LINC00642-203ENST00000444942 TRAV8-3A0A0A6YYJ7 113 aa6.18□□□□□ -1.42
LINC00642-203ENST00000444942 TRAV13-1A0A0B4J241 112 aa6.18□□□□□ -1.42
LINC00642-203ENST00000444942 TMEM238C9JI98 176 aa6.18□□□□□ -1.42
LINC00642-203ENST00000444942 K7EP13 123 aa6.18□□□□□ -1.42
LINC00642-203ENST00000444942 LINC00242Q5T6M2 205 aa6.18□□□□□ -1.42
LINC00642-203ENST00000444942 Q6ZRN7 208 aaPredicted RBP6.18□□□□□ -1.42
LINC00642-203ENST00000444942 C10orf126Q8N4M7 172 aa6.18□□□□□ -1.42
LINC00642-203ENST00000444942 CDKN2A-AS1Q9UH64 79 aa6.18□□□□□ -1.42
LINC00642-203ENST00000444942 KLK12Q9UKR0 248 aa6.18□□□□□ -1.42
LINC00642-203ENST00000444942 IBA57-AS1B1ANH7 110 aa6.18□□□□□ -1.42
LINC00642-203ENST00000444942 H3BUT2 72 aa6.18□□□□□ -1.42
LINC00642-203ENST00000444942 K7ERJ3 54 aa6.18□□□□□ -1.42
LINC00642-203ENST00000444942 PSCAO43653 123 aa6.18□□□□□ -1.42
LINC00642-203ENST00000444942 UBE2V1Q13404 147 aa6.18□□□□□ -1.42
LINC00642-203ENST00000444942 NDUFA12Q9UI09 145 aa6.18□□□□□ -1.42
LINC00642-203ENST00000444942 A0A0J9YXY3 114 aa6.17□□□□□ -1.42
LINC00642-203ENST00000444942 COX6A2Q02221 97 aa6.17□□□□□ -1.42
LINC00642-203ENST00000444942 CLPSL2Q6UWE3 100 aa6.17□□□□□ -1.42
LINC00642-203ENST00000444942 PGPEP1Q9NXJ5 209 aa6.17□□□□□ -1.42
LINC00642-203ENST00000444942 A0A1B0GWB2 263 aa6.16□□□□□ -1.42
LINC00642-203ENST00000444942 OXTP01178 125 aa6.16□□□□□ -1.42
LINC00642-203ENST00000444942 ANGP03950 147 aaKnown RBP6.16□□□□□ -1.42
LINC00642-203ENST00000444942 GTF2H5Q6ZYL4 71 aa6.16□□□□□ -1.42
LINC00642-203ENST00000444942 UBE2WQ96B02 151 aa6.16□□□□□ -1.42
LINC00642-203ENST00000444942 IGLV4-60A0A075B6I1 120 aa6.15□□□□□ -1.43
LINC00642-203ENST00000444942 IGKV2D-24A0A075B6R9 120 aa6.15□□□□□ -1.43
LINC00642-203ENST00000444942 IGKV3OR2-268A0A0C4DH90 116 aa6.15□□□□□ -1.43
LINC00642-203ENST00000444942 IGLV5-39A0A0G2JS06 123 aa6.15□□□□□ -1.43
LINC00642-203ENST00000444942 A0A1W2PPM0 123 aa6.15□□□□□ -1.43
LINC00642-203ENST00000444942 SMIM1B2RUZ4 78 aa6.15□□□□□ -1.43
LINC00642-203ENST00000444942 NDUFA1O15239 70 aa6.15□□□□□ -1.43
LINC00642-203ENST00000444942 FABP2P12104 132 aa6.15□□□□□ -1.43
LINC00642-203ENST00000444942 KRTAP10-1P60331 282 aa6.15□□□□□ -1.43
LINC00642-203ENST00000444942 NAA38Q9BRA0 125 aaKnown RBP6.15□□□□□ -1.43
LINC00642-203ENST00000444942 A0A1B0GUV1 79 aa6.14□□□□□ -1.43
LINC00642-203ENST00000444942 GAGE10A6NGK3 116 aa6.14□□□□□ -1.43
LINC00642-203ENST00000444942 K7EP34 96 aa6.14□□□□□ -1.43
LINC00642-203ENST00000444942 LECT2O14960 151 aa6.14□□□□□ -1.43
LINC00642-203ENST00000444942 TIMM17BO60830 172 aa6.14□□□□□ -1.43
LINC00642-203ENST00000444942 RBX1P62877 108 aa6.14□□□□□ -1.43
LINC00642-203ENST00000444942 RPL24P83731 157 aaKnown RBP6.14□□□□□ -1.43
LINC00642-203ENST00000444942 SPANXDQ9BXN6 97 aa6.14□□□□□ -1.43
LINC00642-203ENST00000444942 SPANXCQ9NY87 97 aa6.14□□□□□ -1.43
LINC00642-203ENST00000444942 MUC2Q02817 5179 aa6.14□□□□□ -1.43
LINC00642-203ENST00000444942 A0A087WTM6 91 aa6.13□□□□□ -1.43
LINC00642-203ENST00000444942 CCL25O15444 150 aa6.13□□□□□ -1.43
LINC00642-203ENST00000444942 CRPP02741 224 aa6.13□□□□□ -1.43
LINC00642-203ENST00000444942 SS18Q15532 418 aa6.13□□□□□ -1.43
LINC00642-203ENST00000444942 SPCS1Q9Y6A9 102 aa6.13□□□□□ -1.43
LINC00642-203ENST00000444942 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.12□□□□□ -1.43
LINC00642-203ENST00000444942 APOMO95445 188 aa6.12□□□□□ -1.43
LINC00642-203ENST00000444942 CIRBPQ14011 172 aaKnown RBP6.12□□□□□ -1.43
LINC00642-203ENST00000444942 MIAQ16674 131 aa6.12□□□□□ -1.43
LINC00642-203ENST00000444942 ENHOQ6UWT2 76 aa6.12□□□□□ -1.43
LINC00642-203ENST00000444942 LINC00269Q8N2A0 174 aa6.12□□□□□ -1.43
LINC00642-203ENST00000444942 IGLV10-54A0A075B6I4 117 aa6.11□□□□□ -1.43
LINC00642-203ENST00000444942 LINC00959A0A1B0GUT2 108 aa6.11□□□□□ -1.43
LINC00642-203ENST00000444942 A4D1N5 150 aa6.11□□□□□ -1.43
LINC00642-203ENST00000444942 PLA2G1BP04054 148 aaKnown RBP6.11□□□□□ -1.43
LINC00642-203ENST00000444942 HERV-K104P63124 156 aa6.11□□□□□ -1.43
LINC00642-203ENST00000444942 HAMPP81172 84 aa6.11□□□□□ -1.43
LINC00642-203ENST00000444942 WFDC2Q14508 124 aa6.11□□□□□ -1.43
LINC00642-203ENST00000444942 MUSTN1Q8IVN3 82 aa6.11□□□□□ -1.43
LINC00642-203ENST00000444942 LITAFQ99732 161 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms