RNA–Protein interactions for RNA: ENST00000444867.1

SEMA3D-202, Transcript of semaphorin 3D, humanhuman

TSL 1 (best) BASIC

Gene SEMA3D, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3D-202ENST00000444867 PRB2P02812 416 aaPredicted RBP12.84□□□□□ -0.35
SEMA3D-202ENST00000444867 Q1RN00 199 aa12.84□□□□□ -0.35
SEMA3D-202ENST00000444867 TRBV30A0A0K0K1B3 111 aa12.84□□□□□ -0.35
SEMA3D-202ENST00000444867 CXCL5P42830 114 aa12.84□□□□□ -0.35
SEMA3D-202ENST00000444867 PSMB2P49721 201 aa12.84□□□□□ -0.35
SEMA3D-202ENST00000444867 FOXI1Q12951 378 aa12.84□□□□□ -0.35
SEMA3D-202ENST00000444867 SOSTDC1Q6X4U4 206 aa12.84□□□□□ -0.35
SEMA3D-202ENST00000444867 KLK12Q9UKR0 248 aa12.84□□□□□ -0.35
SEMA3D-202ENST00000444867 SCGB1C2P0DMR2 95 aa12.83□□□□□ -0.36
SEMA3D-202ENST00000444867 MALP21145 153 aa12.83□□□□□ -0.36
SEMA3D-202ENST00000444867 DEFB121Q5J5C9 76 aa12.83□□□□□ -0.36
SEMA3D-202ENST00000444867 IGLV10-54A0A075B6I4 117 aa12.82□□□□□ -0.36
SEMA3D-202ENST00000444867 TRAV10A0A0B4J240 114 aa12.82□□□□□ -0.36
SEMA3D-202ENST00000444867 TRAV8-4A0A0B4J246 113 aa12.82□□□□□ -0.36
SEMA3D-202ENST00000444867 H7C2G1 150 aa12.81□□□□□ -0.36
SEMA3D-202ENST00000444867 LINC00158P58513 81 aa12.81□□□□□ -0.36
SEMA3D-202ENST00000444867 MIR7-3HGQ8N6C7 128 aa12.81□□□□□ -0.36
SEMA3D-202ENST00000444867 CRPP02741 224 aa12.8□□□□□ -0.36
SEMA3D-202ENST00000444867 KIAA0087Q14695 138 aa12.8□□□□□ -0.36
SEMA3D-202ENST00000444867 CFAP161Q6P656 301 aa12.8□□□□□ -0.36
SEMA3D-202ENST00000444867 ENHOQ6UWT2 76 aa12.8□□□□□ -0.36
SEMA3D-202ENST00000444867 GAGE12HA6NDE8 117 aa12.8□□□□□ -0.36
SEMA3D-202ENST00000444867 TCL1BO95988 128 aa12.8□□□□□ -0.36
SEMA3D-202ENST00000444867 RPL13AP40429 203 aaKnown RBP12.8□□□□□ -0.36
SEMA3D-202ENST00000444867 CKS1BP61024 79 aa12.8□□□□□ -0.36
SEMA3D-202ENST00000444867 ESRGQ1W209 222 aa12.8□□□□□ -0.36
SEMA3D-202ENST00000444867 WFDC10BQ8IUB3 73 aa12.8□□□□□ -0.36
SEMA3D-202ENST00000444867 KLK5Q9Y337 293 aaPredicted RBP12.8□□□□□ -0.36
SEMA3D-202ENST00000444867 C15orf53Q8NAA6 179 aa12.79□□□□□ -0.36
SEMA3D-202ENST00000444867 PRO0461Q9UI25 63 aa12.79□□□□□ -0.36
SEMA3D-202ENST00000444867 NOTCH1P46531 2555 aa12.79□□□□□ -0.36
SEMA3D-202ENST00000444867 OCIAD2Q56VL3 154 aa12.78□□□□□ -0.36
SEMA3D-202ENST00000444867 MRAPQ8TCY5 172 aa12.78□□□□□ -0.36
SEMA3D-202ENST00000444867 COX6CP09669 75 aa12.77□□□□□ -0.36
SEMA3D-202ENST00000444867 TRIAP1O43715 76 aa12.77□□□□□ -0.37
SEMA3D-202ENST00000444867 COX17Q14061 63 aa12.76□□□□□ -0.37
SEMA3D-202ENST00000444867 UBE2WQ96B02 151 aa12.76□□□□□ -0.37
SEMA3D-202ENST00000444867 K7ERU9 68 aa12.75□□□□□ -0.37
SEMA3D-202ENST00000444867 PFN2P35080 140 aa12.75□□□□□ -0.37
SEMA3D-202ENST00000444867 LINC01556Q5JQF7 62 aa12.75□□□□□ -0.37
SEMA3D-202ENST00000444867 TRAV13-2A0A0B4J235 113 aa12.74□□□□□ -0.37
SEMA3D-202ENST00000444867 WFDC2Q14508 124 aa12.74□□□□□ -0.37
SEMA3D-202ENST00000444867 C2orf82Q6UX34 121 aa12.74□□□□□ -0.37
SEMA3D-202ENST00000444867 SND1-IT1Q9HBX3 110 aa12.74□□□□□ -0.37
SEMA3D-202ENST00000444867 TENM3Q9P273 2699 aa12.74□□□□□ -0.37
SEMA3D-202ENST00000444867 CCL18P55774 89 aa12.73□□□□□ -0.37
SEMA3D-202ENST00000444867 ATXN8Q156A1 80 aa12.73□□□□□ -0.37
SEMA3D-202ENST00000444867 SPAG11BQ08648 103 aa12.73□□□□□ -0.37
SEMA3D-202ENST00000444867 MUC7Q8TAX7 377 aa12.71□□□□□ -0.37
SEMA3D-202ENST00000444867 MEGF8Q7Z7M0 2845 aa12.71□□□□□ -0.37
SEMA3D-202ENST00000444867 FBN3Q75N90 2809 aa12.7□□□□□ -0.38
SEMA3D-202ENST00000444867 M0QXV9 152 aa12.69□□□□□ -0.38
SEMA3D-202ENST00000444867 DNAH10OSP0CZ25 163 aa12.69□□□□□ -0.38
SEMA3D-202ENST00000444867 MTURNQ8N3F0 131 aa12.69□□□□□ -0.38
SEMA3D-202ENST00000444867 SMCPP49901 116 aaPredicted RBP12.68□□□□□ -0.38
SEMA3D-202ENST00000444867 KRTAP26-1Q6PEX3 210 aa12.68□□□□□ -0.38
SEMA3D-202ENST00000444867 HUWE1Q7Z6Z7 4374 aaKnown RBP12.68□□□□□ -0.38
SEMA3D-202ENST00000444867 IGKV2-28A0A075B6P5 120 aa12.67□□□□□ -0.38
SEMA3D-202ENST00000444867 IGKV2D-28P01615 120 aa12.67□□□□□ -0.38
SEMA3D-202ENST00000444867 LINC01620Q4KN68 170 aa12.66□□□□□ -0.38
SEMA3D-202ENST00000444867 GVQW2A0A096LPI5 108 aaPredicted RBP12.66□□□□□ -0.38
SEMA3D-202ENST00000444867 ETDBQ3ZM63 59 aa12.66□□□□□ -0.38
SEMA3D-202ENST00000444867 LST1O00453 97 aa12.65□□□□□ -0.38
SEMA3D-202ENST00000444867 LINC00337Q8N6G1 96 aa12.65□□□□□ -0.38
SEMA3D-202ENST00000444867 NTN5Q8WTR8 489 aaPredicted RBP12.65□□□□□ -0.38
SEMA3D-202ENST00000444867 C1orf43Q9BWL3 253 aa12.65□□□□□ -0.38
SEMA3D-202ENST00000444867 C9JAW5 83 aa12.64□□□□□ -0.39
SEMA3D-202ENST00000444867 SLC25A20O43772 301 aa12.64□□□□□ -0.39
SEMA3D-202ENST00000444867 NDUFC2O95298 119 aa12.64□□□□□ -0.39
SEMA3D-202ENST00000444867 RPL28P46779 137 aaKnown RBP12.64□□□□□ -0.39
SEMA3D-202ENST00000444867 LINC01600Q96MT4 127 aa12.64□□□□□ -0.39
SEMA3D-202ENST00000444867 B9D2Q9BPU9 175 aa12.64□□□□□ -0.39
SEMA3D-202ENST00000444867 UNQ6190/PRO20217Q6UXQ8 127 aa12.63□□□□□ -0.39
SEMA3D-202ENST00000444867 C6orf223Q8N319 242 aa12.63□□□□□ -0.39
SEMA3D-202ENST00000444867 LINC00588Q9Y4M8 146 aa12.63□□□□□ -0.39
SEMA3D-202ENST00000444867 J3QR89 54 aa12.62□□□□□ -0.39
SEMA3D-202ENST00000444867 CLEC2BQ92478 149 aa12.62□□□□□ -0.39
SEMA3D-202ENST00000444867 TRBV10-2A0A0K0K1G8 114 aa12.61□□□□□ -0.39
SEMA3D-202ENST00000444867 C10orf25Q5T742 122 aa12.61□□□□□ -0.39
SEMA3D-202ENST00000444867 TEN1Q86WV5 123 aa12.61□□□□□ -0.39
SEMA3D-202ENST00000444867 F8WDY8 70 aa12.6□□□□□ -0.39
SEMA3D-202ENST00000444867 ZNF561-AS1K7EIQ3 104 aa12.6□□□□□ -0.39
SEMA3D-202ENST00000444867 C9orf116Q5BN46 136 aaPredicted RBP12.6□□□□□ -0.39
SEMA3D-202ENST00000444867 UPK3BQ9BT76 320 aa12.6□□□□□ -0.39
SEMA3D-202ENST00000444867 C2orf48Q96LS8 159 aa12.59□□□□□ -0.39
SEMA3D-202ENST00000444867 IGKV2D-24A0A075B6R9 120 aa12.59□□□□□ -0.39
SEMA3D-202ENST00000444867 RNF151Q2KHN1 245 aa12.59□□□□□ -0.39
SEMA3D-202ENST00000444867 ANKRD29Q8N6D5 301 aa12.59□□□□□ -0.39
SEMA3D-202ENST00000444867 H3BT86 120 aa12.58□□□□□ -0.4
SEMA3D-202ENST00000444867 LINC00526Q96FQ7 95 aa12.58□□□□□ -0.4
SEMA3D-202ENST00000444867 C15orf56Q8N910 161 aa12.57□□□□□ -0.4
SEMA3D-202ENST00000444867 SMIM11BQ8TCY0 68 aa12.57□□□□□ -0.4
SEMA3D-202ENST00000444867 PPDPFLQ8WWR9 84 aa12.56□□□□□ -0.4
SEMA3D-202ENST00000444867 C6orf48Q9UBA6 75 aa12.56□□□□□ -0.4
SEMA3D-202ENST00000444867 TRACP01848 142 aa12.55□□□□□ -0.4
SEMA3D-202ENST00000444867 OR13C6PQ8NH95 151 aa12.55□□□□□ -0.4
SEMA3D-202ENST00000444867 CAMK2N2Q96S95 79 aa12.55□□□□□ -0.4
SEMA3D-202ENST00000444867 H0YGX0 51 aa12.55□□□□□ -0.4
SEMA3D-202ENST00000444867 HIGD2BQ4VC39 106 aa12.55□□□□□ -0.4
SEMA3D-202ENST00000444867 CARD19Q96LW7 228 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms