RNA–Protein interactions for RNA: ENST00000439775.1

SNRPD3-204, Transcript of small nuclear ribonucleoprotein D3 polypeptide, humanhuman

TSL 3

Gene SNRPD3, Length 640 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD3-204ENST00000439775 C6orf226Q5I0X4 101 aa9.89□□□□□ -0.83
SNRPD3-204ENST00000439775 ERASQ7Z444 233 aa9.89□□□□□ -0.83
SNRPD3-204ENST00000439775 ALKBH7Q9BT30 221 aaPredicted RBP9.89□□□□□ -0.83
SNRPD3-204ENST00000439775 SEC11CQ9BY50 192 aa9.89□□□□□ -0.83
SNRPD3-204ENST00000439775 GEMIN7Q9H840 131 aaKnown RBP9.89□□□□□ -0.83
SNRPD3-204ENST00000439775 LINC01549A6NIU2 74 aa9.88□□□□□ -0.83
SNRPD3-204ENST00000439775 H0Y9J4 135 aa9.88□□□□□ -0.83
SNRPD3-204ENST00000439775 UBE2BP63146 152 aa9.88□□□□□ -0.83
SNRPD3-204ENST00000439775 GNB1LQ9BYB4 327 aa9.88□□□□□ -0.83
SNRPD3-204ENST00000439775 LINC01546A6NGU7 62 aa9.87□□□□□ -0.83
SNRPD3-204ENST00000439775 S100PP25815 95 aa9.87□□□□□ -0.83
SNRPD3-204ENST00000439775 IFITM2Q01629 132 aa9.87□□□□□ -0.83
SNRPD3-204ENST00000439775 F8VRH5 84 aa9.86□□□□□ -0.83
SNRPD3-204ENST00000439775 CXCL5P42830 114 aa9.86□□□□□ -0.83
SNRPD3-204ENST00000439775 SCGB3A1Q96QR1 104 aa9.86□□□□□ -0.83
SNRPD3-204ENST00000439775 COX19Q49B96 90 aa9.85□□□□□ -0.83
SNRPD3-204ENST00000439775 IGLV5-45A0A087WSX0 123 aa9.84□□□□□ -0.83
SNRPD3-204ENST00000439775 TINCRA0A1B0GVN0 87 aa9.84□□□□□ -0.83
SNRPD3-204ENST00000439775 SMIM1B2RUZ4 78 aa9.84□□□□□ -0.83
SNRPD3-204ENST00000439775 LINC00469Q8N7U9 141 aa9.84□□□□□ -0.83
SNRPD3-204ENST00000439775 PRR26Q8N8Z3 221 aa9.83□□□□□ -0.84
SNRPD3-204ENST00000439775 KRTAP1-4P0C5Y4 121 aa9.82□□□□□ -0.84
SNRPD3-204ENST00000439775 PDZD11Q5EBL8 140 aa9.82□□□□□ -0.84
SNRPD3-204ENST00000439775 XAGE1AQ9HD64 81 aa9.82□□□□□ -0.84
SNRPD3-204ENST00000439775 IGLV1-50A0A075B6I6 118 aa9.81□□□□□ -0.84
SNRPD3-204ENST00000439775 C10orf91Q5T1B1 145 aa9.81□□□□□ -0.84
SNRPD3-204ENST00000439775 COMMD7Q86VX2 200 aa9.81□□□□□ -0.84
SNRPD3-204ENST00000439775 CST9LQ9H4G1 147 aa9.81□□□□□ -0.84
SNRPD3-204ENST00000439775 TP73-AS1Q9UF72 201 aa9.81□□□□□ -0.84
SNRPD3-204ENST00000439775 C22orf24Q9Y442 160 aa9.81□□□□□ -0.84
SNRPD3-204ENST00000439775 NUPR1O60356 82 aa9.8□□□□□ -0.84
SNRPD3-204ENST00000439775 RHEBQ15382 184 aa9.8□□□□□ -0.84
SNRPD3-204ENST00000439775 LBHQ53QV2 105 aaPredicted RBP9.8□□□□□ -0.84
SNRPD3-204ENST00000439775 FA2HQ7L5A8 372 aa9.8□□□□□ -0.84
SNRPD3-204ENST00000439775 COX7B2Q8TF08 81 aa9.8□□□□□ -0.84
SNRPD3-204ENST00000439775 PMVKQ15126 192 aa9.79□□□□□ -0.84
SNRPD3-204ENST00000439775 MRPL18Q9H0U6 180 aaKnown RBP9.79□□□□□ -0.84
SNRPD3-204ENST00000439775 CARHSP1Q9Y2V2 147 aaKnown RBP9.79□□□□□ -0.84
SNRPD3-204ENST00000439775 FABP9Q0Z7S8 132 aa9.78□□□□□ -0.84
SNRPD3-204ENST00000439775 SMCO4Q9NRQ5 59 aa9.78□□□□□ -0.84
SNRPD3-204ENST00000439775 ZNF861PO60384 105 aa9.77□□□□□ -0.85
SNRPD3-204ENST00000439775 MRPL55Q7Z7F7 128 aaKnown RBP9.77□□□□□ -0.85
SNRPD3-204ENST00000439775 SPINK8P0C7L1 97 aa9.76□□□□□ -0.85
SNRPD3-204ENST00000439775 RPL13AP40429 203 aaKnown RBP9.76□□□□□ -0.85
SNRPD3-204ENST00000439775 RPS10P5Q9NQ39 176 aa9.76□□□□□ -0.85
SNRPD3-204ENST00000439775 H3BRM9 83 aa9.75□□□□□ -0.85
SNRPD3-204ENST00000439775 A0A096LNJ9 63 aa9.74□□□□□ -0.85
SNRPD3-204ENST00000439775 IGLC3P0DOY3 106 aa9.74□□□□□ -0.85
SNRPD3-204ENST00000439775 RNF213Q63HN8 5207 aa9.74□□□□□ -0.85
SNRPD3-204ENST00000439775 BCE1O60756 84 aa9.73□□□□□ -0.85
SNRPD3-204ENST00000439775 IGLV5-37A0A075B6J1 123 aa9.72□□□□□ -0.85
SNRPD3-204ENST00000439775 C18orf32Q8TCD1 76 aa9.72□□□□□ -0.85
SNRPD3-204ENST00000439775 IGLV5-39A0A0G2JS06 123 aa9.71□□□□□ -0.86
SNRPD3-204ENST00000439775 ATP5LO75964 103 aa9.71□□□□□ -0.86
SNRPD3-204ENST00000439775 RPL28P46779 137 aaKnown RBP9.71□□□□□ -0.86
SNRPD3-204ENST00000439775 URB1-AS1Q96HZ7 61 aa9.71□□□□□ -0.86
SNRPD3-204ENST00000439775 LINC00167Q96N53 147 aa9.71□□□□□ -0.86
SNRPD3-204ENST00000439775 HBDP02042 147 aa9.7□□□□□ -0.86
SNRPD3-204ENST00000439775 LINC00614P0C842 121 aa9.7□□□□□ -0.86
SNRPD3-204ENST00000439775 RAB5BP61020 215 aa9.7□□□□□ -0.86
SNRPD3-204ENST00000439775 TRAPPC1Q9Y5R8 145 aa9.7□□□□□ -0.86
SNRPD3-204ENST00000439775 ZNF22P17026 224 aaPredicted RBP9.69□□□□□ -0.86
SNRPD3-204ENST00000439775 RPL37AP8A6NKH3 93 aa9.68□□□□□ -0.86
SNRPD3-204ENST00000439775 NKAPP1Q8N9T2 125 aa9.68□□□□□ -0.86
SNRPD3-204ENST00000439775 NDUFA6P56556 154 aa9.67□□□□□ -0.86
SNRPD3-204ENST00000439775 LPAP08519 4548 aa9.66□□□□□ -0.86
SNRPD3-204ENST00000439775 GAGE10A6NGK3 116 aa9.66□□□□□ -0.86
SNRPD3-204ENST00000439775 SNAPINO95295 136 aa9.65□□□□□ -0.86
SNRPD3-204ENST00000439775 APOC3P02656 99 aa9.65□□□□□ -0.86
SNRPD3-204ENST00000439775 COX17Q14061 63 aa9.65□□□□□ -0.86
SNRPD3-204ENST00000439775 PMCHL1Q16048 86 aa9.65□□□□□ -0.86
SNRPD3-204ENST00000439775 SFTA2Q6UW10 78 aa9.65□□□□□ -0.86
SNRPD3-204ENST00000439775 KRTAP13-1Q8IUC0 172 aa9.65□□□□□ -0.86
SNRPD3-204ENST00000439775 PFN2P35080 140 aa9.64□□□□□ -0.87
SNRPD3-204ENST00000439775 SVBPQ8N300 66 aa9.64□□□□□ -0.87
SNRPD3-204ENST00000439775 ERG28Q9UKR5 140 aa9.64□□□□□ -0.87
SNRPD3-204ENST00000439775 A0A087X002 238 aa9.63□□□□□ -0.87
SNRPD3-204ENST00000439775 C11orf86A6NJI1 115 aa9.63□□□□□ -0.87
SNRPD3-204ENST00000439775 NDUFA5Q16718 116 aa9.63□□□□□ -0.87
SNRPD3-204ENST00000439775 BAGE3Q86Y29 109 aa9.63□□□□□ -0.87
SNRPD3-204ENST00000439775 SND1-IT1Q9HBX3 110 aa9.63□□□□□ -0.87
SNRPD3-204ENST00000439775 CRYGAP11844 174 aa9.62□□□□□ -0.87
SNRPD3-204ENST00000439775 VPREB1P12018 145 aa9.62□□□□□ -0.87
SNRPD3-204ENST00000439775 UBE2AP49459 152 aa9.62□□□□□ -0.87
SNRPD3-204ENST00000439775 IGKV2-28A0A075B6P5 120 aa9.61□□□□□ -0.87
SNRPD3-204ENST00000439775 IGKV2D-28P01615 120 aa9.61□□□□□ -0.87
SNRPD3-204ENST00000439775 TMEM170BQ5T4T1 132 aa9.61□□□□□ -0.87
SNRPD3-204ENST00000439775 SCO1O75880 301 aa9.6□□□□□ -0.87
SNRPD3-204ENST00000439775 RPL24P83731 157 aaKnown RBP9.6□□□□□ -0.87
SNRPD3-204ENST00000439775 ZNF625Q96I27 306 aaPredicted RBP9.6□□□□□ -0.87
SNRPD3-204ENST00000439775 PRR4Q16378 134 aa9.59□□□□□ -0.87
SNRPD3-204ENST00000439775 TYMSOSQ8TAI1 123 aa9.59□□□□□ -0.87
SNRPD3-204ENST00000439775 CHCHD1Q96BP2 118 aaKnown RBP9.59□□□□□ -0.87
SNRPD3-204ENST00000439775 CHTOPQ9Y3Y2 248 aaKnown RBP9.59□□□□□ -0.87
SNRPD3-204ENST00000439775 YPEL4Q96NS1 127 aa9.58□□□□□ -0.88
SNRPD3-204ENST00000439775 TMEM126AQ9H061 195 aa9.58□□□□□ -0.88
SNRPD3-204ENST00000439775 TRAV12-1A0A0B4J245 112 aa9.57□□□□□ -0.88
SNRPD3-204ENST00000439775 FAM229BQ4G0N7 80 aa9.57□□□□□ -0.88
SNRPD3-204ENST00000439775 Q8NDZ9 215 aa9.56□□□□□ -0.88
SNRPD3-204ENST00000439775 TMEM223A0PJW6 202 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 176.5 ms