RNA–Protein interactions for RNA: ENST00000436439.6

HMGCL-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2 BASIC

Gene HMGCL, Length 1,354 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-204ENST00000436439 H3BUT2 72 aa7.35□□□□□ -1.23
HMGCL-204ENST00000436439 K7EP13 123 aa7.35□□□□□ -1.23
HMGCL-204ENST00000436439 IGHV3-30-3P0DP02 117 aa7.35□□□□□ -1.23
HMGCL-204ENST00000436439 HERVK_113P63121 156 aa7.35□□□□□ -1.23
HMGCL-204ENST00000436439 Q6ZRN7 208 aaPredicted RBP7.35□□□□□ -1.23
HMGCL-204ENST00000436439 GTF2H5Q6ZYL4 71 aa7.35□□□□□ -1.23
HMGCL-204ENST00000436439 Q8N1X5 172 aa7.35□□□□□ -1.23
HMGCL-204ENST00000436439 RAB37Q96AX2 223 aa7.35□□□□□ -1.23
HMGCL-204ENST00000436439 PRR34Q9NV39 138 aa7.35□□□□□ -1.23
HMGCL-204ENST00000436439 A0A1W2PPM0 123 aa7.34□□□□□ -1.23
HMGCL-204ENST00000436439 ANGP03950 147 aaKnown RBP7.34□□□□□ -1.23
HMGCL-204ENST00000436439 LINC00242Q5T6M2 205 aa7.34□□□□□ -1.23
HMGCL-204ENST00000436439 LINC00959A0A1B0GUT2 108 aa7.33□□□□□ -1.24
HMGCL-204ENST00000436439 GAGE10A6NGK3 116 aa7.33□□□□□ -1.24
HMGCL-204ENST00000436439 TMEM238C9JI98 176 aa7.33□□□□□ -1.24
HMGCL-204ENST00000436439 FABP2P12104 132 aa7.33□□□□□ -1.24
HMGCL-204ENST00000436439 FUSP35637 526 aaKnown RBP eCLIP7.33□□□□□ -1.24
HMGCL-204ENST00000436439 REG3AQ06141 175 aa7.33□□□□□ -1.24
HMGCL-204ENST00000436439 Q8N3U1 123 aa7.33□□□□□ -1.24
HMGCL-204ENST00000436439 IGHV3-64A0A075B6Q5 118 aa7.33□□□□□ -1.24
HMGCL-204ENST00000436439 TRAV13-1A0A0B4J241 112 aa7.33□□□□□ -1.24
HMGCL-204ENST00000436439 K7EP34 96 aa7.33□□□□□ -1.24
HMGCL-204ENST00000436439 K7ERJ3 54 aa7.33□□□□□ -1.24
HMGCL-204ENST00000436439 IGHV3-30P01768 117 aa7.33□□□□□ -1.24
HMGCL-204ENST00000436439 IGHV3-30-5P0DP03 117 aa7.33□□□□□ -1.24
HMGCL-204ENST00000436439 LINC00269Q8N2A0 174 aa7.33□□□□□ -1.24
HMGCL-204ENST00000436439 TRAV8-3A0A0A6YYJ7 113 aa7.32□□□□□ -1.24
HMGCL-204ENST00000436439 A0A0J9YXY3 114 aa7.32□□□□□ -1.24
HMGCL-204ENST00000436439 SPINK8P0C7L1 97 aa7.32□□□□□ -1.24
HMGCL-204ENST00000436439 SS18Q15532 418 aa7.32□□□□□ -1.24
HMGCL-204ENST00000436439 CDKN2A-AS1Q9UH64 79 aa7.32□□□□□ -1.24
HMGCL-204ENST00000436439 NDUFA12Q9UI09 145 aa7.32□□□□□ -1.24
HMGCL-204ENST00000436439 KLK12Q9UKR0 248 aa7.32□□□□□ -1.24
HMGCL-204ENST00000436439 TRAV8-4A0A0B4J246 113 aa7.31□□□□□ -1.24
HMGCL-204ENST00000436439 IGLV5-39A0A0G2JS06 123 aa7.31□□□□□ -1.24
HMGCL-204ENST00000436439 TIMM17BO60830 172 aa7.31□□□□□ -1.24
HMGCL-204ENST00000436439 IGHV3-33P01772 117 aa7.31□□□□□ -1.24
HMGCL-204ENST00000436439 COX6A2Q02221 97 aa7.31□□□□□ -1.24
HMGCL-204ENST00000436439 MIAQ16674 131 aa7.31□□□□□ -1.24
HMGCL-204ENST00000436439 ENHOQ6UWT2 76 aa7.31□□□□□ -1.24
HMGCL-204ENST00000436439 C10orf126Q8N4M7 172 aa7.31□□□□□ -1.24
HMGCL-204ENST00000436439 SPCS1Q9Y6A9 102 aa7.31□□□□□ -1.24
HMGCL-204ENST00000436439 IGHV3OR16-9A0A0B4J2B5 98 aa7.3□□□□□ -1.24
HMGCL-204ENST00000436439 NDUFA1O15239 70 aa7.3□□□□□ -1.24
HMGCL-204ENST00000436439 RPL24P83731 157 aaKnown RBP7.3□□□□□ -1.24
HMGCL-204ENST00000436439 NAA38Q9BRA0 125 aaKnown RBP7.3□□□□□ -1.24
HMGCL-204ENST00000436439 SPANXDQ9BXN6 97 aa7.3□□□□□ -1.24
HMGCL-204ENST00000436439 SPANXCQ9NY87 97 aa7.3□□□□□ -1.24
HMGCL-204ENST00000436439 IBA57-AS1B1ANH7 110 aa7.29□□□□□ -1.24
HMGCL-204ENST00000436439 CRPP02741 224 aa7.29□□□□□ -1.24
HMGCL-204ENST00000436439 CLPSL2Q6UWE3 100 aa7.29□□□□□ -1.24
HMGCL-204ENST00000436439 CD164L2Q6UWJ8 174 aa7.29□□□□□ -1.24
HMGCL-204ENST00000436439 LINC01561Q8N1V8 128 aa7.29□□□□□ -1.24
HMGCL-204ENST00000436439 A0A087WZ39 114 aa7.28□□□□□ -1.24
HMGCL-204ENST00000436439 IGKV3OR2-268A0A0C4DH90 116 aa7.28□□□□□ -1.24
HMGCL-204ENST00000436439 SMIM1B2RUZ4 78 aa7.28□□□□□ -1.24
HMGCL-204ENST00000436439 CHCHD10Q8WYQ3 142 aaPredicted RBP7.28□□□□□ -1.24
HMGCL-204ENST00000436439 LITAFQ99732 161 aa7.28□□□□□ -1.24
HMGCL-204ENST00000436439 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.27□□□□□ -1.25
HMGCL-204ENST00000436439 XGP55808 180 aa7.27□□□□□ -1.25
HMGCL-204ENST00000436439 UBE2WQ96B02 151 aa7.27□□□□□ -1.25
HMGCL-204ENST00000436439 A0A0B4J2C4 111 aa7.26□□□□□ -1.25
HMGCL-204ENST00000436439 CFC1BP0CG36 223 aa7.26□□□□□ -1.25
HMGCL-204ENST00000436439 CFC1P0CG37 223 aa7.26□□□□□ -1.25
HMGCL-204ENST00000436439 IFITM1P13164 125 aa7.26□□□□□ -1.25
HMGCL-204ENST00000436439 HERV-K104P63124 156 aa7.26□□□□□ -1.25
HMGCL-204ENST00000436439 CIRBPQ14011 172 aaKnown RBP7.26□□□□□ -1.25
HMGCL-204ENST00000436439 LYRM7Q5U5X0 104 aa7.26□□□□□ -1.25
HMGCL-204ENST00000436439 MUSTN1Q8IVN3 82 aa7.26□□□□□ -1.25
HMGCL-204ENST00000436439 PGPEP1Q9NXJ5 209 aa7.26□□□□□ -1.25
HMGCL-204ENST00000436439 A4D1N5 150 aa7.25□□□□□ -1.25
HMGCL-204ENST00000436439 APOMO95445 188 aa7.25□□□□□ -1.25
HMGCL-204ENST00000436439 XCL1P47992 114 aa7.25□□□□□ -1.25
HMGCL-204ENST00000436439 FOXI1Q12951 378 aa7.25□□□□□ -1.25
HMGCL-204ENST00000436439 KRTAP26-1Q6PEX3 210 aa7.25□□□□□ -1.25
HMGCL-204ENST00000436439 PRO1854Q9UHT4 67 aa7.25□□□□□ -1.25
HMGCL-204ENST00000436439 IGLV10-54A0A075B6I4 117 aa7.24□□□□□ -1.25
HMGCL-204ENST00000436439 A0A087WTM6 91 aa7.24□□□□□ -1.25
HMGCL-204ENST00000436439 EPM2AB3EWF7 344 aa7.24□□□□□ -1.25
HMGCL-204ENST00000436439 TSPAN13O95857 204 aa7.24□□□□□ -1.25
HMGCL-204ENST00000436439 KRTAP10-1P60331 282 aa7.24□□□□□ -1.25
HMGCL-204ENST00000436439 COPS9Q8WXC6 57 aa7.24□□□□□ -1.25
HMGCL-204ENST00000436439 FAT1Q14517 4588 aa7.24□□□□□ -1.25
HMGCL-204ENST00000436439 COX7A2LO14548 114 aa7.23□□□□□ -1.25
HMGCL-204ENST00000436439 RMI2Q96E14 147 aa7.23□□□□□ -1.25
HMGCL-204ENST00000436439 ZNF625Q96I27 306 aaPredicted RBP7.23□□□□□ -1.25
HMGCL-204ENST00000436439 C1orf43Q9BWL3 253 aa7.23□□□□□ -1.25
HMGCL-204ENST00000436439 PPDPFQ9H3Y8 114 aa7.23□□□□□ -1.25
HMGCL-204ENST00000436439 GAGE12HA6NDE8 117 aa7.22□□□□□ -1.25
HMGCL-204ENST00000436439 PRSS2P07478 247 aa7.22□□□□□ -1.25
HMGCL-204ENST00000436439 ADAMTSL4-AS1Q5T5F5 129 aa7.22□□□□□ -1.25
HMGCL-204ENST00000436439 SFTA2Q6UW10 78 aa7.22□□□□□ -1.25
HMGCL-204ENST00000436439 C5orf38Q86SI9 138 aa7.22□□□□□ -1.25
HMGCL-204ENST00000436439 COX7B2Q8TF08 81 aa7.21□□□□□ -1.25
HMGCL-204ENST00000436439 VPS13BQ7Z7G8 4022 aa7.21□□□□□ -1.25
HMGCL-204ENST00000436439 HERC1Q15751 4861 aa7.21□□□□□ -1.26
HMGCL-204ENST00000436439 IGKV2D-24A0A075B6R9 120 aa7.2□□□□□ -1.26
HMGCL-204ENST00000436439 F8W1H4 67 aa7.2□□□□□ -1.26
HMGCL-204ENST00000436439 HAMPP81172 84 aa7.2□□□□□ -1.26
HMGCL-204ENST00000436439 Q5VSD8 79 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms