RNA–Protein interactions for RNA: ENST00000430328.6

RIF1-204, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,992 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-204ENST00000430328 RPS28P62857 69 aaKnown RBP11.98□□□□□ -0.49
RIF1-204ENST00000430328 LINC01556Q5JQF7 62 aa11.98□□□□□ -0.49
RIF1-204ENST00000430328 Q6YL49 198 aa11.98□□□□□ -0.49
RIF1-204ENST00000430328 PRR3P79522 188 aaKnown RBP11.97□□□□□ -0.49
RIF1-204ENST00000430328 MRGPRG-AS1Q2M3A8 158 aa11.97□□□□□ -0.49
RIF1-204ENST00000430328 C9orf116Q5BN46 136 aaPredicted RBP11.97□□□□□ -0.49
RIF1-204ENST00000430328 P0C879 139 aa11.96□□□□□ -0.5
RIF1-204ENST00000430328 IGLV8-61A0A075B6I0 122 aa11.96□□□□□ -0.5
RIF1-204ENST00000430328 IGLV5-52A0A0A0MRZ9 124 aa11.96□□□□□ -0.5
RIF1-204ENST00000430328 ADORA2A-AS1P86434 159 aa11.95□□□□□ -0.5
RIF1-204ENST00000430328 SHISA2Q6UWI4 295 aa11.95□□□□□ -0.5
RIF1-204ENST00000430328 CPAMD8Q8IZJ3 1885 aa11.95□□□□□ -0.5
RIF1-204ENST00000430328 FSTL3O95633 263 aa11.95□□□□□ -0.5
RIF1-204ENST00000430328 LINC00337Q8N6G1 96 aa11.94□□□□□ -0.5
RIF1-204ENST00000430328 LINC00846Q9NV44 126 aa11.94□□□□□ -0.5
RIF1-204ENST00000430328 IGFL2Q6UWQ7 119 aa11.94□□□□□ -0.5
RIF1-204ENST00000430328 COL4A1P02462 1669 aa11.94□□□□□ -0.5
RIF1-204ENST00000430328 TLN2Q9Y4G6 2542 aa11.94□□□□□ -0.5
RIF1-204ENST00000430328 MDFIQ99750 246 aa11.93□□□□□ -0.5
RIF1-204ENST00000430328 IGIPA6NJ69 53 aa11.93□□□□□ -0.5
RIF1-204ENST00000430328 SMIM29Q86T20 159 aa11.92□□□□□ -0.5
RIF1-204ENST00000430328 PLA2G2CQ5R387 149 aa11.92□□□□□ -0.5
RIF1-204ENST00000430328 FN1P02751 2386 aaKnown RBP11.92□□□□□ -0.5
RIF1-204ENST00000430328 LINC00242Q5T6M2 205 aa11.91□□□□□ -0.5
RIF1-204ENST00000430328 CRIPTQ9P021 101 aa11.91□□□□□ -0.5
RIF1-204ENST00000430328 SMIM1B2RUZ4 78 aa11.91□□□□□ -0.5
RIF1-204ENST00000430328 IGLV2-11P01706 119 aa11.91□□□□□ -0.5
RIF1-204ENST00000430328 FLG2Q5D862 2391 aaPredicted RBP11.91□□□□□ -0.5
RIF1-204ENST00000430328 LTBP1Q14766 1721 aa11.91□□□□□ -0.5
RIF1-204ENST00000430328 F8WDY8 70 aa11.91□□□□□ -0.5
RIF1-204ENST00000430328 KLLNB2CW77 178 aa11.9□□□□□ -0.5
RIF1-204ENST00000430328 Q6ZSV7 163 aa11.9□□□□□ -0.51
RIF1-204ENST00000430328 LINC00574Q9H8X3 128 aa11.9□□□□□ -0.51
RIF1-204ENST00000430328 PIP4P1Q86T03 277 aa11.89□□□□□ -0.51
RIF1-204ENST00000430328 COL4A6Q14031 1691 aa11.89□□□□□ -0.51
RIF1-204ENST00000430328 COX6A2Q02221 97 aa11.88□□□□□ -0.51
RIF1-204ENST00000430328 CHCHD7Q9BUK0 85 aa11.88□□□□□ -0.51
RIF1-204ENST00000430328 CNFNQ9BYD5 112 aa11.87□□□□□ -0.51
RIF1-204ENST00000430328 BCE1O60756 84 aa11.85□□□□□ -0.51
RIF1-204ENST00000430328 H3BPC8 53 aa11.85□□□□□ -0.51
RIF1-204ENST00000430328 LMO4P61968 165 aa11.84□□□□□ -0.51
RIF1-204ENST00000430328 ADAMTSL4-AS1Q5T5F5 129 aa11.84□□□□□ -0.51
RIF1-204ENST00000430328 PLA2G5P39877 138 aa11.83□□□□□ -0.52
RIF1-204ENST00000430328 FBXL19-AS1Q494R0 122 aa11.83□□□□□ -0.52
RIF1-204ENST00000430328 INAFM1C9JVW0 142 aa11.82□□□□□ -0.52
RIF1-204ENST00000430328 PRR9Q5T870 116 aa11.82□□□□□ -0.52
RIF1-204ENST00000430328 ZFHX2Q9C0A1 2572 aaPredicted RBP11.81□□□□□ -0.52
RIF1-204ENST00000430328 GAS8-AS1O95177 125 aa11.81□□□□□ -0.52
RIF1-204ENST00000430328 Q8N2B8 174 aa11.81□□□□□ -0.52
RIF1-204ENST00000430328 PSMG3-AS1Q96PY0 264 aa11.8□□□□□ -0.52
RIF1-204ENST00000430328 A8MTW9 85 aa11.79□□□□□ -0.52
RIF1-204ENST00000430328 TLN1Q9Y490 2541 aaKnown RBP11.78□□□□□ -0.52
RIF1-204ENST00000430328 TRAV22A0A0B4J277 110 aa11.78□□□□□ -0.52
RIF1-204ENST00000430328 TSPEAR-AS2P59090 65 aa11.77□□□□□ -0.52
RIF1-204ENST00000430328 ZNF295-AS1Q8N0V1 137 aa11.77□□□□□ -0.52
RIF1-204ENST00000430328 C11orf21Q9P2W6 132 aa11.77□□□□□ -0.52
RIF1-204ENST00000430328 LINC01600Q96MT4 127 aa11.77□□□□□ -0.53
RIF1-204ENST00000430328 CDIP1Q9H305 208 aa11.77□□□□□ -0.53
RIF1-204ENST00000430328 CYP4F30PQ9H0H9 118 aa11.76□□□□□ -0.53
RIF1-204ENST00000430328 BRWD1-AS2P59051 145 aa11.76□□□□□ -0.53
RIF1-204ENST00000430328 UQCR11O14957 56 aa11.76□□□□□ -0.53
RIF1-204ENST00000430328 LUZP6Q538Z0 58 aa11.76□□□□□ -0.53
RIF1-204ENST00000430328 SPACA4Q8TDM5 124 aa11.76□□□□□ -0.53
RIF1-204ENST00000430328 CD164Q04900 197 aa11.75□□□□□ -0.53
RIF1-204ENST00000430328 IGLV4-60A0A075B6I1 120 aa11.75□□□□□ -0.53
RIF1-204ENST00000430328 LINC00313P59037 77 aa11.75□□□□□ -0.53
RIF1-204ENST00000430328 KIAA0087Q14695 138 aa11.74□□□□□ -0.53
RIF1-204ENST00000430328 A0A1B0GW54 56 aa11.74□□□□□ -0.53
RIF1-204ENST00000430328 AMELXQ99217 191 aa11.73□□□□□ -0.53
RIF1-204ENST00000430328 SMCR5Q8TEV8 140 aa11.73□□□□□ -0.53
RIF1-204ENST00000430328 LINC01561Q8N1V8 128 aa11.73□□□□□ -0.53
RIF1-204ENST00000430328 THSD7BQ9C0I4 1608 aa11.73□□□□□ -0.53
RIF1-204ENST00000430328 SPATA3Q8NHX4 192 aa11.73□□□□□ -0.53
RIF1-204ENST00000430328 LINC01554Q52M75 96 aa11.73□□□□□ -0.53
RIF1-204ENST00000430328 C10orf99Q6UWK7 81 aa11.73□□□□□ -0.53
RIF1-204ENST00000430328 A0A1B0GUV1 79 aa11.71□□□□□ -0.53
RIF1-204ENST00000430328 MOBPQ13875 183 aa11.71□□□□□ -0.54
RIF1-204ENST00000430328 APLNQ9ULZ1 77 aa11.69□□□□□ -0.54
RIF1-204ENST00000430328 C1orf229Q6ZS94 237 aaPredicted RBP11.68□□□□□ -0.54
RIF1-204ENST00000430328 LINC01006Q8NI28 216 aa11.68□□□□□ -0.54
RIF1-204ENST00000430328 C18orf65Q6ZTR6 163 aa11.67□□□□□ -0.54
RIF1-204ENST00000430328 C1orf134Q5TEV5 83 aa11.66□□□□□ -0.54
RIF1-204ENST00000430328 C22orf24Q9Y442 160 aa11.66□□□□□ -0.54
RIF1-204ENST00000430328 ZNF580Q9UK33 172 aa11.65□□□□□ -0.54
RIF1-204ENST00000430328 MIR22HGQ0VDD5 57 aa11.64□□□□□ -0.55
RIF1-204ENST00000430328 FHL2Q14192 279 aa11.64□□□□□ -0.55
RIF1-204ENST00000430328 C11orf72Q8NBR9 251 aa11.63□□□□□ -0.55
RIF1-204ENST00000430328 Q6ZRU5 148 aa11.62□□□□□ -0.55
RIF1-204ENST00000430328 KTN1-AS1Q86SY8 53 aa11.62□□□□□ -0.55
RIF1-204ENST00000430328 IGLV1-40P01703 118 aa11.61□□□□□ -0.55
RIF1-204ENST00000430328 TM2D3Q9BRN9 247 aa11.61□□□□□ -0.55
RIF1-204ENST00000430328 Q6ZPA2 131 aa11.61□□□□□ -0.55
RIF1-204ENST00000430328 PKD1L2Q7Z442 2459 aa11.61□□□□□ -0.55
RIF1-204ENST00000430328 LOC101927531A0A1B0GV80 90 aa11.61□□□□□ -0.55
RIF1-204ENST00000430328 LY6G6DO95868 133 aa11.61□□□□□ -0.55
RIF1-204ENST00000430328 LCA10Q71F78 164 aa11.61□□□□□ -0.55
RIF1-204ENST00000430328 COA5Q86WW8 74 aa11.6□□□□□ -0.55
RIF1-204ENST00000430328 EPM2AB3EWF7 344 aa11.6□□□□□ -0.55
RIF1-204ENST00000430328 URB1-AS1Q96HZ7 61 aa11.6□□□□□ -0.55
RIF1-204ENST00000430328 A8MUN3 132 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms