RNA–Protein interactions for RNA: ENST00000430200.1

HDAC4-202, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-202ENST00000430200 UBE2BP63146 152 aa7.05□□□□□ -1.28
HDAC4-202ENST00000430200 PACRGQ96M98 296 aaPredicted RBP7.05□□□□□ -1.28
HDAC4-202ENST00000430200 LINC01546A6NGU7 62 aa7.04□□□□□ -1.28
HDAC4-202ENST00000430200 ALKBH7Q9BT30 221 aaPredicted RBP7.04□□□□□ -1.28
HDAC4-202ENST00000430200 IGLV5-45A0A087WSX0 123 aa7.03□□□□□ -1.28
HDAC4-202ENST00000430200 A0A096LNJ9 63 aa7.03□□□□□ -1.28
HDAC4-202ENST00000430200 PRSS2P07478 247 aa7.03□□□□□ -1.28
HDAC4-202ENST00000430200 CKS1BP61024 79 aa7.03□□□□□ -1.28
HDAC4-202ENST00000430200 HERVK_113P63121 156 aa7.03□□□□□ -1.28
HDAC4-202ENST00000430200 URB1-AS1Q96HZ7 61 aa7.03□□□□□ -1.28
HDAC4-202ENST00000430200 C22orf24Q9Y442 160 aa7.03□□□□□ -1.28
HDAC4-202ENST00000430200 MUC2Q02817 5179 aa7.02□□□□□ -1.28
HDAC4-202ENST00000430200 F8VRH5 84 aa7.02□□□□□ -1.29
HDAC4-202ENST00000430200 ERASQ7Z444 233 aa7.02□□□□□ -1.29
HDAC4-202ENST00000430200 TRAV9-1A0A075B6T8 112 aa7.01□□□□□ -1.29
HDAC4-202ENST00000430200 SPINK8P0C7L1 97 aa7.01□□□□□ -1.29
HDAC4-202ENST00000430200 C6orf226Q5I0X4 101 aa7.01□□□□□ -1.29
HDAC4-202ENST00000430200 UQCC3Q6UW78 93 aa7.01□□□□□ -1.29
HDAC4-202ENST00000430200 SCGB3A1Q96QR1 104 aa7.01□□□□□ -1.29
HDAC4-202ENST00000430200 GEMIN7Q9H840 131 aaKnown RBP7.01□□□□□ -1.29
HDAC4-202ENST00000430200 A0A087X002 238 aa7□□□□□ -1.29
HDAC4-202ENST00000430200 TINCRA0A1B0GVN0 87 aa7□□□□□ -1.29
HDAC4-202ENST00000430200 SCO1O75880 301 aa7□□□□□ -1.29
HDAC4-202ENST00000430200 COX7B2Q8TF08 81 aa7□□□□□ -1.29
HDAC4-202ENST00000430200 SEC11CQ9BY50 192 aa7□□□□□ -1.29
HDAC4-202ENST00000430200 GNB1LQ9BYB4 327 aa7□□□□□ -1.29
HDAC4-202ENST00000430200 CST9LQ9H4G1 147 aa7□□□□□ -1.29
HDAC4-202ENST00000430200 IGLV1-50A0A075B6I6 118 aa6.99□□□□□ -1.29
HDAC4-202ENST00000430200 COMMD7Q86VX2 200 aa6.99□□□□□ -1.29
HDAC4-202ENST00000430200 Q8NDZ9 215 aa6.99□□□□□ -1.29
HDAC4-202ENST00000430200 MRPL18Q9H0U6 180 aaKnown RBP6.99□□□□□ -1.29
HDAC4-202ENST00000430200 RPL37AP8A6NKH3 93 aa6.98□□□□□ -1.29
HDAC4-202ENST00000430200 ZNF861PO60384 105 aa6.98□□□□□ -1.29
HDAC4-202ENST00000430200 SEC11AP67812 179 aa6.98□□□□□ -1.29
HDAC4-202ENST00000430200 C10orf91Q5T1B1 145 aa6.98□□□□□ -1.29
HDAC4-202ENST00000430200 MRPL55Q7Z7F7 128 aaKnown RBP6.98□□□□□ -1.29
HDAC4-202ENST00000430200 GAGE10A6NGK3 116 aa6.97□□□□□ -1.29
HDAC4-202ENST00000430200 CXCL5P42830 114 aa6.97□□□□□ -1.29
HDAC4-202ENST00000430200 PDZD11Q5EBL8 140 aa6.97□□□□□ -1.29
HDAC4-202ENST00000430200 PAPPA-AS1Q5QFB9 102 aa6.97□□□□□ -1.29
HDAC4-202ENST00000430200 KRTAP13-1Q8IUC0 172 aa6.97□□□□□ -1.29
HDAC4-202ENST00000430200 LINC00167Q96N53 147 aa6.97□□□□□ -1.29
HDAC4-202ENST00000430200 TP73-AS1Q9UF72 201 aa6.97□□□□□ -1.29
HDAC4-202ENST00000430200 PMVKQ15126 192 aa6.96□□□□□ -1.3
HDAC4-202ENST00000430200 PMCHL1Q16048 86 aa6.96□□□□□ -1.3
HDAC4-202ENST00000430200 CARHSP1Q9Y2V2 147 aaKnown RBP6.96□□□□□ -1.3
HDAC4-202ENST00000430200 IGLV5-37A0A075B6J1 123 aa6.95□□□□□ -1.3
HDAC4-202ENST00000430200 IGLV5-39A0A0G2JS06 123 aa6.95□□□□□ -1.3
HDAC4-202ENST00000430200 NUPR1O60356 82 aa6.95□□□□□ -1.3
HDAC4-202ENST00000430200 BCE1O60756 84 aa6.95□□□□□ -1.3
HDAC4-202ENST00000430200 IGLC3P0DOY3 106 aa6.95□□□□□ -1.3
HDAC4-202ENST00000430200 ZNF22P17026 224 aaPredicted RBP6.95□□□□□ -1.3
HDAC4-202ENST00000430200 RAB5BP61020 215 aa6.95□□□□□ -1.3
HDAC4-202ENST00000430200 C18orf32Q8TCD1 76 aa6.95□□□□□ -1.3
HDAC4-202ENST00000430200 ANAPC11Q9NYG5 84 aa6.95□□□□□ -1.3
HDAC4-202ENST00000430200 S100PP25815 95 aa6.94□□□□□ -1.3
HDAC4-202ENST00000430200 FABP9Q0Z7S8 132 aa6.94□□□□□ -1.3
HDAC4-202ENST00000430200 KRTAP13-2Q52LG2 175 aa6.94□□□□□ -1.3
HDAC4-202ENST00000430200 FA2HQ7L5A8 372 aa6.94□□□□□ -1.3
HDAC4-202ENST00000430200 G0S2P27469 103 aa6.93□□□□□ -1.3
HDAC4-202ENST00000430200 RHEBQ15382 184 aa6.93□□□□□ -1.3
HDAC4-202ENST00000430200 LBHQ53QV2 105 aaPredicted RBP6.93□□□□□ -1.3
HDAC4-202ENST00000430200 RPS10P5Q9NQ39 176 aa6.93□□□□□ -1.3
HDAC4-202ENST00000430200 IGKV2-28A0A075B6P5 120 aa6.92□□□□□ -1.3
HDAC4-202ENST00000430200 C11orf86A6NJI1 115 aa6.92□□□□□ -1.3
HDAC4-202ENST00000430200 IGKV2D-28P01615 120 aa6.92□□□□□ -1.3
HDAC4-202ENST00000430200 VPREB1P12018 145 aa6.92□□□□□ -1.3
HDAC4-202ENST00000430200 RPL13AP40429 203 aaKnown RBP6.92□□□□□ -1.3
HDAC4-202ENST00000430200 SMCO4Q9NRQ5 59 aa6.92□□□□□ -1.3
HDAC4-202ENST00000430200 PFN2P35080 140 aa6.91□□□□□ -1.3
HDAC4-202ENST00000430200 TMEM238C9JI98 176 aa6.9□□□□□ -1.3
HDAC4-202ENST00000430200 TSPAN13O95857 204 aa6.9□□□□□ -1.3
HDAC4-202ENST00000430200 RPL28P46779 137 aaKnown RBP6.9□□□□□ -1.3
HDAC4-202ENST00000430200 PRLHP81277 87 aa6.9□□□□□ -1.3
HDAC4-202ENST00000430200 PRR4Q16378 134 aa6.9□□□□□ -1.3
HDAC4-202ENST00000430200 ZNF625Q96I27 306 aaPredicted RBP6.9□□□□□ -1.3
HDAC4-202ENST00000430200 YPEL4Q96NS1 127 aa6.9□□□□□ -1.3
HDAC4-202ENST00000430200 SND1-IT1Q9HBX3 110 aa6.9□□□□□ -1.3
HDAC4-202ENST00000430200 HBDP02042 147 aa6.89□□□□□ -1.31
HDAC4-202ENST00000430200 COX19Q49B96 90 aa6.89□□□□□ -1.31
HDAC4-202ENST00000430200 ERG28Q9UKR5 140 aa6.89□□□□□ -1.31
HDAC4-202ENST00000430200 MUC17Q685J3 4493 aa6.88□□□□□ -1.31
HDAC4-202ENST00000430200 LINC01549A6NIU2 74 aa6.88□□□□□ -1.31
HDAC4-202ENST00000430200 H3BRM9 83 aa6.88□□□□□ -1.31
HDAC4-202ENST00000430200 ATP5LO75964 103 aa6.88□□□□□ -1.31
HDAC4-202ENST00000430200 NDUFA6P56556 154 aa6.88□□□□□ -1.31
HDAC4-202ENST00000430200 NKAPP1Q8N9T2 125 aa6.88□□□□□ -1.31
HDAC4-202ENST00000430200 TRAPPC1Q9Y5R8 145 aa6.88□□□□□ -1.31
HDAC4-202ENST00000430200 LINC00614P0C842 121 aa6.87□□□□□ -1.31
HDAC4-202ENST00000430200 M0R378 163 aa6.86□□□□□ -1.31
HDAC4-202ENST00000430200 RETNLBQ9BQ08 111 aa6.86□□□□□ -1.31
HDAC4-202ENST00000430200 TMEM126AQ9H061 195 aa6.86□□□□□ -1.31
HDAC4-202ENST00000430200 APOC3P02656 99 aa6.85□□□□□ -1.31
HDAC4-202ENST00000430200 CRYGAP11844 174 aa6.85□□□□□ -1.31
HDAC4-202ENST00000430200 UBE2AP49459 152 aa6.85□□□□□ -1.31
HDAC4-202ENST00000430200 BAGE3Q86Y29 109 aa6.85□□□□□ -1.31
HDAC4-202ENST00000430200 TYMSOSQ8TAI1 123 aa6.85□□□□□ -1.31
HDAC4-202ENST00000430200 FAT4Q6V0I7 4981 aa6.85□□□□□ -1.31
HDAC4-202ENST00000430200 TMEM170BQ5T4T1 132 aa6.84□□□□□ -1.31
HDAC4-202ENST00000430200 TMEM223A0PJW6 202 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms