RNA–Protein interactions for RNA: ENST00000428361.5

CTDSP1-202, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 842 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-202ENST00000428361 TOMM6Q96B49 74 aa9.42□□□□□ -0.9
CTDSP1-202ENST00000428361 IGLV1-50A0A075B6I6 118 aa9.41□□□□□ -0.9
CTDSP1-202ENST00000428361 F8VRH5 84 aa9.41□□□□□ -0.9
CTDSP1-202ENST00000428361 COX19Q49B96 90 aa9.41□□□□□ -0.9
CTDSP1-202ENST00000428361 NUPR1O60356 82 aa9.4□□□□□ -0.9
CTDSP1-202ENST00000428361 C9orf129Q5T035 196 aaKnown RBP9.4□□□□□ -0.9
CTDSP1-202ENST00000428361 ZC2HC1BQ5TFG8 222 aa9.4□□□□□ -0.9
CTDSP1-202ENST00000428361 SCGB3A1Q96QR1 104 aa9.4□□□□□ -0.9
CTDSP1-202ENST00000428361 RPL13AP40429 203 aaKnown RBP9.39□□□□□ -0.91
CTDSP1-202ENST00000428361 CDKN2A-AS1Q9UH64 79 aa9.39□□□□□ -0.91
CTDSP1-202ENST00000428361 TMEM218A2RU14 115 aa9.38□□□□□ -0.91
CTDSP1-202ENST00000428361 LINC00469Q8N7U9 141 aa9.38□□□□□ -0.91
CTDSP1-202ENST00000428361 GNB1LQ9BYB4 327 aa9.38□□□□□ -0.91
CTDSP1-202ENST00000428361 TINCRA0A1B0GVN0 87 aa9.37□□□□□ -0.91
CTDSP1-202ENST00000428361 KIAA1644Q3SXP7 199 aa9.37□□□□□ -0.91
CTDSP1-202ENST00000428361 PDZD11Q5EBL8 140 aa9.37□□□□□ -0.91
CTDSP1-202ENST00000428361 PRR26Q8N8Z3 221 aa9.37□□□□□ -0.91
CTDSP1-202ENST00000428361 SEC11CQ9BY50 192 aa9.37□□□□□ -0.91
CTDSP1-202ENST00000428361 TP73-AS1Q9UF72 201 aa9.37□□□□□ -0.91
CTDSP1-202ENST00000428361 LRP2P98164 4655 aa9.37□□□□□ -0.91
CTDSP1-202ENST00000428361 KRTAP7-1Q8IUC3 87 aa9.36□□□□□ -0.91
CTDSP1-202ENST00000428361 SMCO4Q9NRQ5 59 aa9.36□□□□□ -0.91
CTDSP1-202ENST00000428361 ZNF861PO60384 105 aa9.35□□□□□ -0.91
CTDSP1-202ENST00000428361 FA2HQ7L5A8 372 aa9.35□□□□□ -0.91
CTDSP1-202ENST00000428361 KRTAP11-1Q8IUC1 163 aa9.35□□□□□ -0.91
CTDSP1-202ENST00000428361 CARHSP1Q9Y2V2 147 aaKnown RBP9.35□□□□□ -0.91
CTDSP1-202ENST00000428361 C22orf24Q9Y442 160 aa9.35□□□□□ -0.91
CTDSP1-202ENST00000428361 H3BRM9 83 aa9.34□□□□□ -0.91
CTDSP1-202ENST00000428361 ADCYAP1P18509 176 aa9.34□□□□□ -0.91
CTDSP1-202ENST00000428361 COX7B2Q8TF08 81 aa9.34□□□□□ -0.91
CTDSP1-202ENST00000428361 MRPL18Q9H0U6 180 aaKnown RBP9.34□□□□□ -0.91
CTDSP1-202ENST00000428361 XAGE1AQ9HD64 81 aa9.34□□□□□ -0.91
CTDSP1-202ENST00000428361 IGLV5-45A0A087WSX0 123 aa9.33□□□□□ -0.92
CTDSP1-202ENST00000428361 LINC01546A6NGU7 62 aa9.33□□□□□ -0.92
CTDSP1-202ENST00000428361 SMIM1B2RUZ4 78 aa9.33□□□□□ -0.92
CTDSP1-202ENST00000428361 MRPL55Q7Z7F7 128 aaKnown RBP9.33□□□□□ -0.92
CTDSP1-202ENST00000428361 RPL28P46779 137 aaKnown RBP9.32□□□□□ -0.92
CTDSP1-202ENST00000428361 PMVKQ15126 192 aa9.32□□□□□ -0.92
CTDSP1-202ENST00000428361 KRTAP1-4P0C5Y4 121 aa9.31□□□□□ -0.92
CTDSP1-202ENST00000428361 CST9LQ9H4G1 147 aa9.31□□□□□ -0.92
CTDSP1-202ENST00000428361 FABP9Q0Z7S8 132 aa9.3□□□□□ -0.92
CTDSP1-202ENST00000428361 RHEBQ15382 184 aa9.3□□□□□ -0.92
CTDSP1-202ENST00000428361 NDUFA5Q16718 116 aa9.3□□□□□ -0.92
CTDSP1-202ENST00000428361 BCE1O60756 84 aa9.29□□□□□ -0.92
CTDSP1-202ENST00000428361 ATP5LO75964 103 aa9.29□□□□□ -0.92
CTDSP1-202ENST00000428361 NKAPP1Q8N9T2 125 aa9.28□□□□□ -0.92
CTDSP1-202ENST00000428361 SPINK8P0C7L1 97 aa9.27□□□□□ -0.93
CTDSP1-202ENST00000428361 COMMD7Q86VX2 200 aa9.27□□□□□ -0.93
CTDSP1-202ENST00000428361 SFTA2Q6UW10 78 aa9.26□□□□□ -0.93
CTDSP1-202ENST00000428361 RPS10P5Q9NQ39 176 aa9.26□□□□□ -0.93
CTDSP1-202ENST00000428361 IGLV5-37A0A075B6J1 123 aa9.25□□□□□ -0.93
CTDSP1-202ENST00000428361 IGLC3P0DOY3 106 aa9.24□□□□□ -0.93
CTDSP1-202ENST00000428361 RAB5BP61020 215 aa9.24□□□□□ -0.93
CTDSP1-202ENST00000428361 IFITM2Q01629 132 aa9.24□□□□□ -0.93
CTDSP1-202ENST00000428361 C10orf91Q5T1B1 145 aa9.24□□□□□ -0.93
CTDSP1-202ENST00000428361 LINC00167Q96N53 147 aa9.24□□□□□ -0.93
CTDSP1-202ENST00000428361 HBDP02042 147 aa9.23□□□□□ -0.93
CTDSP1-202ENST00000428361 CRYGAP11844 174 aa9.23□□□□□ -0.93
CTDSP1-202ENST00000428361 NDUFA6P56556 154 aa9.23□□□□□ -0.93
CTDSP1-202ENST00000428361 LINC00614P0C842 121 aa9.22□□□□□ -0.93
CTDSP1-202ENST00000428361 UBE2AP49459 152 aa9.22□□□□□ -0.93
CTDSP1-202ENST00000428361 COX17Q14061 63 aa9.22□□□□□ -0.93
CTDSP1-202ENST00000428361 TRAPPC1Q9Y5R8 145 aa9.22□□□□□ -0.93
CTDSP1-202ENST00000428361 IGLV5-39A0A0G2JS06 123 aa9.21□□□□□ -0.94
CTDSP1-202ENST00000428361 RPL37AP8A6NKH3 93 aa9.21□□□□□ -0.94
CTDSP1-202ENST00000428361 ATP6V1G1O75348 118 aa9.21□□□□□ -0.94
CTDSP1-202ENST00000428361 RPL24P83731 157 aaKnown RBP9.21□□□□□ -0.94
CTDSP1-202ENST00000428361 PRR4Q16378 134 aa9.21□□□□□ -0.94
CTDSP1-202ENST00000428361 GAGE10A6NGK3 116 aa9.2□□□□□ -0.94
CTDSP1-202ENST00000428361 S100A1P23297 94 aa9.2□□□□□ -0.94
CTDSP1-202ENST00000428361 ZNF22P17026 224 aaPredicted RBP9.19□□□□□ -0.94
CTDSP1-202ENST00000428361 PFN2P35080 140 aa9.19□□□□□ -0.94
CTDSP1-202ENST00000428361 TYMSOSQ8TAI1 123 aa9.19□□□□□ -0.94
CTDSP1-202ENST00000428361 C18orf32Q8TCD1 76 aa9.19□□□□□ -0.94
CTDSP1-202ENST00000428361 ERG28Q9UKR5 140 aa9.19□□□□□ -0.94
CTDSP1-202ENST00000428361 A0A096LNJ9 63 aa9.16□□□□□ -0.94
CTDSP1-202ENST00000428361 SNAPINO95295 136 aa9.16□□□□□ -0.94
CTDSP1-202ENST00000428361 FAM229BQ4G0N7 80 aa9.16□□□□□ -0.94
CTDSP1-202ENST00000428361 TMEM170BQ5T4T1 132 aa9.16□□□□□ -0.94
CTDSP1-202ENST00000428361 BAGE3Q86Y29 109 aa9.16□□□□□ -0.94
CTDSP1-202ENST00000428361 SVBPQ8N300 66 aa9.16□□□□□ -0.94
CTDSP1-202ENST00000428361 SND1-IT1Q9HBX3 110 aa9.16□□□□□ -0.94
CTDSP1-202ENST00000428361 RNF213Q63HN8 5207 aa9.16□□□□□ -0.94
CTDSP1-202ENST00000428361 IGKV2-28A0A075B6P5 120 aa9.15□□□□□ -0.94
CTDSP1-202ENST00000428361 IGKV2D-28P01615 120 aa9.15□□□□□ -0.94
CTDSP1-202ENST00000428361 A0A087X002 238 aa9.14□□□□□ -0.95
CTDSP1-202ENST00000428361 VPREB1P12018 145 aa9.14□□□□□ -0.95
CTDSP1-202ENST00000428361 KRTAP13-1Q8IUC0 172 aa9.14□□□□□ -0.95
CTDSP1-202ENST00000428361 TSPAN13O95857 204 aa9.13□□□□□ -0.95
CTDSP1-202ENST00000428361 APOC3P02656 99 aa9.13□□□□□ -0.95
CTDSP1-202ENST00000428361 URB1-AS1Q96HZ7 61 aa9.13□□□□□ -0.95
CTDSP1-202ENST00000428361 LPAP08519 4548 aa9.12□□□□□ -0.95
CTDSP1-202ENST00000428361 C11orf86A6NJI1 115 aa9.12□□□□□ -0.95
CTDSP1-202ENST00000428361 CTAG1AP78358 180 aa9.12□□□□□ -0.95
CTDSP1-202ENST00000428361 PMCHL1Q16048 86 aa9.12□□□□□ -0.95
CTDSP1-202ENST00000428361 FAM19A1Q7Z5A9 133 aa9.12□□□□□ -0.95
CTDSP1-202ENST00000428361 CHCHD1Q96BP2 118 aaKnown RBP9.12□□□□□ -0.95
CTDSP1-202ENST00000428361 CHTOPQ9Y3Y2 248 aaKnown RBP9.12□□□□□ -0.95
CTDSP1-202ENST00000428361 IGKV2D-26A0A0A0MRZ7 120 aa9.11□□□□□ -0.95
CTDSP1-202ENST00000428361 ZNF625Q96I27 306 aaPredicted RBP9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 163.7 ms