RNA–Protein interactions for RNA: ENST00000427943.1

PSPC1-202, Transcript of paraspeckle component 1, humanhuman

TSL 5

Gene PSPC1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-202ENST00000427943 ALKBH7Q9BT30 221 aaPredicted RBP11.25□□□□□ -0.61
PSPC1-202ENST00000427943 GNB1LQ9BYB4 327 aa11.25□□□□□ -0.61
PSPC1-202ENST00000427943 GEMIN7Q9H840 131 aaKnown RBP11.25□□□□□ -0.61
PSPC1-202ENST00000427943 SEC11AP67812 179 aa11.24□□□□□ -0.61
PSPC1-202ENST00000427943 C6orf226Q5I0X4 101 aa11.24□□□□□ -0.61
PSPC1-202ENST00000427943 IGLV7-43P04211 117 aa11.23□□□□□ -0.61
PSPC1-202ENST00000427943 UBE2BP63146 152 aa11.23□□□□□ -0.61
PSPC1-202ENST00000427943 ERASQ7Z444 233 aa11.23□□□□□ -0.61
PSPC1-202ENST00000427943 LINC00469Q8N7U9 141 aa11.22□□□□□ -0.61
PSPC1-202ENST00000427943 UBR4Q5T4S7 5183 aa11.21□□□□□ -0.61
PSPC1-202ENST00000427943 MRPL18Q9H0U6 180 aaKnown RBP11.21□□□□□ -0.61
PSPC1-202ENST00000427943 LINC01546A6NGU7 62 aa11.2□□□□□ -0.62
PSPC1-202ENST00000427943 RPS10P5Q9NQ39 176 aa11.2□□□□□ -0.62
PSPC1-202ENST00000427943 SMIM1B2RUZ4 78 aa11.19□□□□□ -0.62
PSPC1-202ENST00000427943 FABP9Q0Z7S8 132 aa11.19□□□□□ -0.62
PSPC1-202ENST00000427943 COX19Q49B96 90 aa11.19□□□□□ -0.62
PSPC1-202ENST00000427943 C10orf91Q5T1B1 145 aa11.19□□□□□ -0.62
PSPC1-202ENST00000427943 FA2HQ7L5A8 372 aa11.19□□□□□ -0.62
PSPC1-202ENST00000427943 XAGE1AQ9HD64 81 aa11.19□□□□□ -0.62
PSPC1-202ENST00000427943 F8VRH5 84 aa11.18□□□□□ -0.62
PSPC1-202ENST00000427943 RHEBQ15382 184 aa11.18□□□□□ -0.62
PSPC1-202ENST00000427943 DIRC1Q969H9 104 aa11.18□□□□□ -0.62
PSPC1-202ENST00000427943 SMCO4Q9NRQ5 59 aa11.18□□□□□ -0.62
PSPC1-202ENST00000427943 CARHSP1Q9Y2V2 147 aaKnown RBP11.18□□□□□ -0.62
PSPC1-202ENST00000427943 TINCRA0A1B0GVN0 87 aa11.17□□□□□ -0.62
PSPC1-202ENST00000427943 LINC01549A6NIU2 74 aa11.16□□□□□ -0.62
PSPC1-202ENST00000427943 H0Y9J4 135 aa11.16□□□□□ -0.62
PSPC1-202ENST00000427943 CST9LQ9H4G1 147 aa11.16□□□□□ -0.62
PSPC1-202ENST00000427943 IGLV5-45A0A087WSX0 123 aa11.15□□□□□ -0.62
PSPC1-202ENST00000427943 CXCL5P42830 114 aa11.15□□□□□ -0.62
PSPC1-202ENST00000427943 COX7B2Q8TF08 81 aa11.15□□□□□ -0.62
PSPC1-202ENST00000427943 SPINK8P0C7L1 97 aa11.14□□□□□ -0.63
PSPC1-202ENST00000427943 PMVKQ15126 192 aa11.14□□□□□ -0.63
PSPC1-202ENST00000427943 PDZD11Q5EBL8 140 aa11.14□□□□□ -0.63
PSPC1-202ENST00000427943 PRR26Q8N8Z3 221 aa11.14□□□□□ -0.63
PSPC1-202ENST00000427943 C22orf24Q9Y442 160 aa11.13□□□□□ -0.63
PSPC1-202ENST00000427943 A0A096LNJ9 63 aa11.11□□□□□ -0.63
PSPC1-202ENST00000427943 TRAPPC1Q9Y5R8 145 aa11.11□□□□□ -0.63
PSPC1-202ENST00000427943 C18orf32Q8TCD1 76 aa11.1□□□□□ -0.63
PSPC1-202ENST00000427943 URB1-AS1Q96HZ7 61 aa11.1□□□□□ -0.63
PSPC1-202ENST00000427943 LRP2P98164 4655 aa11.09□□□□□ -0.63
PSPC1-202ENST00000427943 NDUFA6P56556 154 aa11.09□□□□□ -0.63
PSPC1-202ENST00000427943 APOC3P02656 99 aa11.08□□□□□ -0.64
PSPC1-202ENST00000427943 KRTAP1-4P0C5Y4 121 aa11.08□□□□□ -0.64
PSPC1-202ENST00000427943 RAB5BP61020 215 aa11.08□□□□□ -0.64
PSPC1-202ENST00000427943 PMCHL1Q16048 86 aa11.08□□□□□ -0.64
PSPC1-202ENST00000427943 LBHQ53QV2 105 aaPredicted RBP11.08□□□□□ -0.64
PSPC1-202ENST00000427943 MRPL55Q7Z7F7 128 aaKnown RBP11.07□□□□□ -0.64
PSPC1-202ENST00000427943 H3BRM9 83 aa11.06□□□□□ -0.64
PSPC1-202ENST00000427943 NUPR1O60356 82 aa11.06□□□□□ -0.64
PSPC1-202ENST00000427943 LINC00614P0C842 121 aa11.06□□□□□ -0.64
PSPC1-202ENST00000427943 IGLC3P0DOY3 106 aa11.06□□□□□ -0.64
PSPC1-202ENST00000427943 TP73-AS1Q9UF72 201 aa11.06□□□□□ -0.64
PSPC1-202ENST00000427943 HBDP02042 147 aa11.05□□□□□ -0.64
PSPC1-202ENST00000427943 ZNF22P17026 224 aaPredicted RBP11.05□□□□□ -0.64
PSPC1-202ENST00000427943 IGLV1-50A0A075B6I6 118 aa11.04□□□□□ -0.64
PSPC1-202ENST00000427943 ZNF861PO60384 105 aa11.04□□□□□ -0.64
PSPC1-202ENST00000427943 GAGE10A6NGK3 116 aa11.03□□□□□ -0.64
PSPC1-202ENST00000427943 RPL37AP8A6NKH3 93 aa11.03□□□□□ -0.64
PSPC1-202ENST00000427943 ATP5LO75964 103 aa11.03□□□□□ -0.64
PSPC1-202ENST00000427943 SNAPINO95295 136 aa11.03□□□□□ -0.64
PSPC1-202ENST00000427943 NDUFA5Q16718 116 aa11.03□□□□□ -0.64
PSPC1-202ENST00000427943 LINC00167Q96N53 147 aa11.03□□□□□ -0.64
PSPC1-202ENST00000427943 IGLV5-39A0A0G2JS06 123 aa11.02□□□□□ -0.65
PSPC1-202ENST00000427943 SVBPQ8N300 66 aa11.02□□□□□ -0.65
PSPC1-202ENST00000427943 PFN2P35080 140 aa11.01□□□□□ -0.65
PSPC1-202ENST00000427943 C11orf86A6NJI1 115 aa11□□□□□ -0.65
PSPC1-202ENST00000427943 BCE1O60756 84 aa11□□□□□ -0.65
PSPC1-202ENST00000427943 IGLV5-37A0A075B6J1 123 aa10.99□□□□□ -0.65
PSPC1-202ENST00000427943 BAGE3Q86Y29 109 aa10.99□□□□□ -0.65
PSPC1-202ENST00000427943 NKAPP1Q8N9T2 125 aa10.99□□□□□ -0.65
PSPC1-202ENST00000427943 SCO1O75880 301 aa10.98□□□□□ -0.65
PSPC1-202ENST00000427943 RPL13AP40429 203 aaKnown RBP10.97□□□□□ -0.65
PSPC1-202ENST00000427943 RPL28P46779 137 aaKnown RBP10.97□□□□□ -0.65
PSPC1-202ENST00000427943 TMEM170BQ5T4T1 132 aa10.97□□□□□ -0.65
PSPC1-202ENST00000427943 ZNF625Q96I27 306 aaPredicted RBP10.97□□□□□ -0.65
PSPC1-202ENST00000427943 ERG28Q9UKR5 140 aa10.97□□□□□ -0.65
PSPC1-202ENST00000427943 YPEL4Q96NS1 127 aa10.96□□□□□ -0.65
PSPC1-202ENST00000427943 IGKV2-28A0A075B6P5 120 aa10.94□□□□□ -0.66
PSPC1-202ENST00000427943 IGKV2D-28P01615 120 aa10.94□□□□□ -0.66
PSPC1-202ENST00000427943 SND1-IT1Q9HBX3 110 aa10.94□□□□□ -0.66
PSPC1-202ENST00000427943 CHTOPQ9Y3Y2 248 aaKnown RBP10.94□□□□□ -0.66
PSPC1-202ENST00000427943 VPREB1P12018 145 aa10.92□□□□□ -0.66
PSPC1-202ENST00000427943 UBE2AP49459 152 aa10.92□□□□□ -0.66
PSPC1-202ENST00000427943 RNF213Q63HN8 5207 aa10.92□□□□□ -0.66
PSPC1-202ENST00000427943 A0A087X002 238 aa10.91□□□□□ -0.66
PSPC1-202ENST00000427943 CBLN2Q8IUK8 224 aa10.91□□□□□ -0.66
PSPC1-202ENST00000427943 CHCHD1Q96BP2 118 aaKnown RBP10.91□□□□□ -0.66
PSPC1-202ENST00000427943 COX17Q14061 63 aa10.9□□□□□ -0.66
PSPC1-202ENST00000427943 KRTAP13-1Q8IUC0 172 aa10.9□□□□□ -0.66
PSPC1-202ENST00000427943 Q8NDZ9 215 aa10.9□□□□□ -0.66
PSPC1-202ENST00000427943 IFI27L1Q96BM0 104 aa10.9□□□□□ -0.66
PSPC1-202ENST00000427943 ANAPC11Q9NYG5 84 aa10.89□□□□□ -0.67
PSPC1-202ENST00000427943 LPAP08519 4548 aa10.89□□□□□ -0.67
PSPC1-202ENST00000427943 TRAV12-1A0A0B4J245 112 aa10.88□□□□□ -0.67
PSPC1-202ENST00000427943 TMEM223A0PJW6 202 aa10.88□□□□□ -0.67
PSPC1-202ENST00000427943 PRLHP81277 87 aa10.88□□□□□ -0.67
PSPC1-202ENST00000427943 SFTA2Q6UW10 78 aa10.88□□□□□ -0.67
PSPC1-202ENST00000427943 A0A0U1RRA0 63 aa10.87□□□□□ -0.67
PSPC1-202ENST00000427943 TMEM238C9JI98 176 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms