RNA–Protein interactions for RNA: ENST00000426778.5

ERCC3-202, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 2,916 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-202ENST00000426778 LRRC75A-AS1Q8N1F1 130 aa10.03□□□□□ -0.8
ERCC3-202ENST00000426778 SPATA3Q8NHX4 192 aa10.03□□□□□ -0.8
ERCC3-202ENST00000426778 C14orf132Q9NPU4 83 aa10.03□□□□□ -0.8
ERCC3-202ENST00000426778 PKD1L1Q8TDX9 2849 aa10.02□□□□□ -0.8
ERCC3-202ENST00000426778 C6orf226Q5I0X4 101 aa10.02□□□□□ -0.81
ERCC3-202ENST00000426778 COPS9Q8WXC6 57 aa10.02□□□□□ -0.81
ERCC3-202ENST00000426778 FAM240AA0A1B0GVK7 77 aa10.02□□□□□ -0.81
ERCC3-202ENST00000426778 LECT2O14960 151 aa10.02□□□□□ -0.81
ERCC3-202ENST00000426778 Q6Q795 121 aa10.02□□□□□ -0.81
ERCC3-202ENST00000426778 TRAV13-2A0A0B4J235 113 aa10.01□□□□□ -0.81
ERCC3-202ENST00000426778 TRACP01848 142 aa10.01□□□□□ -0.81
ERCC3-202ENST00000426778 MALP21145 153 aa10.01□□□□□ -0.81
ERCC3-202ENST00000426778 TMEM86BQ8N661 226 aa10.01□□□□□ -0.81
ERCC3-202ENST00000426778 HIVEP1P15822 2718 aa10.01□□□□□ -0.81
ERCC3-202ENST00000426778 LINC00482Q8N8I6 264 aa10.01□□□□□ -0.81
ERCC3-202ENST00000426778 LINC00959A0A1B0GUT2 108 aa10□□□□□ -0.81
ERCC3-202ENST00000426778 DNAL4O96015 105 aa10□□□□□ -0.81
ERCC3-202ENST00000426778 RPL28P46779 137 aaKnown RBP10□□□□□ -0.81
ERCC3-202ENST00000426778 KRTAP1-1Q07627 177 aa10□□□□□ -0.81
ERCC3-202ENST00000426778 NCR3O14931 201 aa9.99□□□□□ -0.81
ERCC3-202ENST00000426778 C9orf116Q5BN46 136 aaPredicted RBP9.99□□□□□ -0.81
ERCC3-202ENST00000426778 OVOL2Q9BRP0 275 aa9.99□□□□□ -0.81
ERCC3-202ENST00000426778 A0A087WZ39 114 aa9.98□□□□□ -0.81
ERCC3-202ENST00000426778 LINC00526Q96FQ7 95 aa9.97□□□□□ -0.81
ERCC3-202ENST00000426778 TRBV7-7A0A0K0K1E9 115 aa9.96□□□□□ -0.81
ERCC3-202ENST00000426778 KRTAP10-3P60369 221 aa9.96□□□□□ -0.81
ERCC3-202ENST00000426778 SDIM1Q6ZPB5 146 aa9.96□□□□□ -0.81
ERCC3-202ENST00000426778 IGKV3D-7A0A0C4DH55 119 aa9.96□□□□□ -0.81
ERCC3-202ENST00000426778 RNASE1P07998 156 aaKnown RBP9.95□□□□□ -0.82
ERCC3-202ENST00000426778 LINC00269Q8N2A0 174 aa9.95□□□□□ -0.82
ERCC3-202ENST00000426778 SMIM20Q8N5G0 67 aa9.95□□□□□ -0.82
ERCC3-202ENST00000426778 PF4P02776 101 aa9.95□□□□□ -0.82
ERCC3-202ENST00000426778 MRPL23Q16540 153 aaKnown RBP9.95□□□□□ -0.82
ERCC3-202ENST00000426778 IBA57-AS1B1ANH7 110 aa9.94□□□□□ -0.82
ERCC3-202ENST00000426778 DEFB135Q30KP9 77 aa9.93□□□□□ -0.82
ERCC3-202ENST00000426778 NSD1Q96L73 2696 aaPredicted RBP9.93□□□□□ -0.82
ERCC3-202ENST00000426778 FAM222AQ5U5X8 452 aa9.93□□□□□ -0.82
ERCC3-202ENST00000426778 LINC00643Q86TS7 51 aa9.93□□□□□ -0.82
ERCC3-202ENST00000426778 ACYP1P07311 99 aa9.93□□□□□ -0.82
ERCC3-202ENST00000426778 A0A087WVE0 104 aa9.92□□□□□ -0.82
ERCC3-202ENST00000426778 HTN3P15516 51 aa9.92□□□□□ -0.82
ERCC3-202ENST00000426778 SS18Q15532 418 aa9.91□□□□□ -0.82
ERCC3-202ENST00000426778 X6R8D5 127 aa9.91□□□□□ -0.82
ERCC3-202ENST00000426778 INAFM2P0DMQ5 153 aa9.91□□□□□ -0.82
ERCC3-202ENST00000426778 LINC00846Q9NV44 126 aa9.91□□□□□ -0.82
ERCC3-202ENST00000426778 ANGP03950 147 aaKnown RBP9.9□□□□□ -0.82
ERCC3-202ENST00000426778 CMC4P56277 68 aaPredicted RBP9.89□□□□□ -0.83
ERCC3-202ENST00000426778 Q8NDZ9 215 aa9.89□□□□□ -0.83
ERCC3-202ENST00000426778 KLK5Q9Y337 293 aaPredicted RBP9.89□□□□□ -0.83
ERCC3-202ENST00000426778 C6orf223Q8N319 242 aa9.89□□□□□ -0.83
ERCC3-202ENST00000426778 C16orf95Q9H693 158 aa9.88□□□□□ -0.83
ERCC3-202ENST00000426778 CXCL5P42830 114 aa9.88□□□□□ -0.83
ERCC3-202ENST00000426778 PRO0255Q9UI72 69 aa9.87□□□□□ -0.83
ERCC3-202ENST00000426778 H0YGX0 51 aa9.87□□□□□ -0.83
ERCC3-202ENST00000426778 NANOS2P60321 138 aaKnown RBP9.87□□□□□ -0.83
ERCC3-202ENST00000426778 WFDC9Q8NEX5 89 aa9.87□□□□□ -0.83
ERCC3-202ENST00000426778 CHCHD10Q8WYQ3 142 aaPredicted RBP9.87□□□□□ -0.83
ERCC3-202ENST00000426778 C9orf153Q5TBE3 101 aa9.86□□□□□ -0.83
ERCC3-202ENST00000426778 C10orf25Q5T742 122 aa9.86□□□□□ -0.83
ERCC3-202ENST00000426778 FAM110AQ9BQ89 295 aa9.86□□□□□ -0.83
ERCC3-202ENST00000426778 CELA1Q9UNI1 258 aa9.86□□□□□ -0.83
ERCC3-202ENST00000426778 HILS1P60008 231 aa9.85□□□□□ -0.83
ERCC3-202ENST00000426778 KIR2DL5BQ8NHK3 375 aa9.85□□□□□ -0.83
ERCC3-202ENST00000426778 CFAP161Q6P656 301 aa9.85□□□□□ -0.83
ERCC3-202ENST00000426778 Q8IZM0 81 aa9.85□□□□□ -0.83
ERCC3-202ENST00000426778 REG3AQ06141 175 aa9.84□□□□□ -0.83
ERCC3-202ENST00000426778 KIAA0087Q14695 138 aa9.84□□□□□ -0.83
ERCC3-202ENST00000426778 ORMDL1Q9P0S3 153 aa9.84□□□□□ -0.83
ERCC3-202ENST00000426778 IMUPQ9GZP8 106 aa9.83□□□□□ -0.84
ERCC3-202ENST00000426778 C6orf99Q4VX62 202 aa9.83□□□□□ -0.84
ERCC3-202ENST00000426778 UNQ6190/PRO20217Q6UXQ8 127 aa9.83□□□□□ -0.84
ERCC3-202ENST00000426778 TENM3Q9P273 2699 aa9.82□□□□□ -0.84
ERCC3-202ENST00000426778 IGHV4-28A0A0C4DH34 117 aa9.82□□□□□ -0.84
ERCC3-202ENST00000426778 A0A1B0GUV1 79 aa9.82□□□□□ -0.84
ERCC3-202ENST00000426778 CYSTM1Q9H1C7 97 aa9.82□□□□□ -0.84
ERCC3-202ENST00000426778 HIST1H4AP62805 103 aaKnown RBP9.81□□□□□ -0.84
ERCC3-202ENST00000426778 LINC00612Q8N6U2 182 aa9.81□□□□□ -0.84
ERCC3-202ENST00000426778 LY6G6DO95868 133 aa9.81□□□□□ -0.84
ERCC3-202ENST00000426778 C3orf22Q8N5N4 141 aa9.81□□□□□ -0.84
ERCC3-202ENST00000426778 DAD1P61803 113 aa9.8□□□□□ -0.84
ERCC3-202ENST00000426778 CD164L2Q6UWJ8 174 aa9.8□□□□□ -0.84
ERCC3-202ENST00000426778 Q8N814 137 aa9.8□□□□□ -0.84
ERCC3-202ENST00000426778 PPDPFQ9H3Y8 114 aa9.8□□□□□ -0.84
ERCC3-202ENST00000426778 ANK2Q01484 3957 aa9.8□□□□□ -0.84
ERCC3-202ENST00000426778 KLK12Q9UKR0 248 aa9.79□□□□□ -0.84
ERCC3-202ENST00000426778 S100A7L2Q5SY68 101 aa9.79□□□□□ -0.84
ERCC3-202ENST00000426778 OBSCN-AS1Q96MR7 158 aa9.79□□□□□ -0.84
ERCC3-202ENST00000426778 A0A1B0GX51 115 aa9.78□□□□□ -0.84
ERCC3-202ENST00000426778 hADV29S1A0JD25 119 aa9.78□□□□□ -0.84
ERCC3-202ENST00000426778 FBN1P35555 2871 aaKnown RBP9.78□□□□□ -0.84
ERCC3-202ENST00000426778 NOTCH1P46531 2555 aa9.78□□□□□ -0.84
ERCC3-202ENST00000426778 RPL18AQ02543 176 aaKnown RBP9.78□□□□□ -0.84
ERCC3-202ENST00000426778 XAGE1AQ9HD64 81 aa9.78□□□□□ -0.84
ERCC3-202ENST00000426778 STAB1Q9NY15 2570 aa9.78□□□□□ -0.84
ERCC3-202ENST00000426778 LINC01561Q8N1V8 128 aa9.77□□□□□ -0.85
ERCC3-202ENST00000426778 SPAG11BQ08648 103 aa9.76□□□□□ -0.85
ERCC3-202ENST00000426778 TMEM126AQ9H061 195 aa9.76□□□□□ -0.85
ERCC3-202ENST00000426778 LOC107984640A0A0U1RRK4 108 aa9.76□□□□□ -0.85
ERCC3-202ENST00000426778 M0R2N4 97 aa9.76□□□□□ -0.85
ERCC3-202ENST00000426778 UQCRQO14949 82 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms