RNA–Protein interactions for RNA: ENST00000425876.6

CDK3-201, Transcript of cyclin dependent kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK3, Length 1,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3-201ENST00000425876 CFC1P0CG37 223 aa9.73□□□□□ -0.85
CDK3-201ENST00000425876 MALP21145 153 aa9.73□□□□□ -0.85
CDK3-201ENST00000425876 CXCL5P42830 114 aa9.73□□□□□ -0.85
CDK3-201ENST00000425876 CCL18P55774 89 aa9.73□□□□□ -0.85
CDK3-201ENST00000425876 MEIG1Q5JSS6 88 aa9.73□□□□□ -0.85
CDK3-201ENST00000425876 A0A0B4J2C4 111 aa9.72□□□□□ -0.85
CDK3-201ENST00000425876 IBA57-AS1B1ANH7 110 aa9.72□□□□□ -0.85
CDK3-201ENST00000425876 APOMO95445 188 aa9.72□□□□□ -0.85
CDK3-201ENST00000425876 KIAA0087Q14695 138 aa9.72□□□□□ -0.85
CDK3-201ENST00000425876 VAMP3Q15836 100 aa9.72□□□□□ -0.85
CDK3-201ENST00000425876 KLK5Q9Y337 293 aaPredicted RBP9.72□□□□□ -0.85
CDK3-201ENST00000425876 A0A1W2PPM0 123 aa9.71□□□□□ -0.85
CDK3-201ENST00000425876 UPK3BQ9BT76 320 aa9.71□□□□□ -0.85
CDK3-201ENST00000425876 LINC00588Q9Y4M8 146 aa9.71□□□□□ -0.85
CDK3-201ENST00000425876 UBE2V1Q13404 147 aa9.71□□□□□ -0.86
CDK3-201ENST00000425876 LINC00308Q8TCZ7 52 aa9.71□□□□□ -0.86
CDK3-201ENST00000425876 CFAP161Q6P656 301 aa9.7□□□□□ -0.86
CDK3-201ENST00000425876 PRO1854Q9UHT4 67 aa9.7□□□□□ -0.86
CDK3-201ENST00000425876 FABP2P12104 132 aa9.69□□□□□ -0.86
CDK3-201ENST00000425876 KRTAP26-1Q6PEX3 210 aa9.69□□□□□ -0.86
CDK3-201ENST00000425876 DYNC2H1Q8NCM8 4307 aaKnown RBP9.69□□□□□ -0.86
CDK3-201ENST00000425876 CKS1BP61024 79 aa9.68□□□□□ -0.86
CDK3-201ENST00000425876 DAND5Q8N907 189 aa9.68□□□□□ -0.86
CDK3-201ENST00000425876 NAA38Q9BRA0 125 aaKnown RBP9.68□□□□□ -0.86
CDK3-201ENST00000425876 PGPEP1Q9NXJ5 209 aa9.68□□□□□ -0.86
CDK3-201ENST00000425876 ERG28Q9UKR5 140 aa9.67□□□□□ -0.86
CDK3-201ENST00000425876 A0A0U1RRA0 63 aa9.67□□□□□ -0.86
CDK3-201ENST00000425876 EIF4EBP3O60516 100 aaPredicted RBP9.67□□□□□ -0.86
CDK3-201ENST00000425876 GTF2H5Q6ZYL4 71 aa9.67□□□□□ -0.86
CDK3-201ENST00000425876 C1orf43Q9BWL3 253 aa9.67□□□□□ -0.86
CDK3-201ENST00000425876 GAGE10A6NGK3 116 aa9.66□□□□□ -0.86
CDK3-201ENST00000425876 TSPAN13O95857 204 aa9.66□□□□□ -0.86
CDK3-201ENST00000425876 LINC00158P58513 81 aa9.66□□□□□ -0.86
CDK3-201ENST00000425876 NPC2P61916 151 aa9.66□□□□□ -0.86
CDK3-201ENST00000425876 SPAG11BQ08648 103 aa9.66□□□□□ -0.86
CDK3-201ENST00000425876 COX17Q14061 63 aa9.66□□□□□ -0.86
CDK3-201ENST00000425876 SOSTDC1Q6X4U4 206 aa9.66□□□□□ -0.86
CDK3-201ENST00000425876 MIR7-3HGQ8N6C7 128 aa9.66□□□□□ -0.86
CDK3-201ENST00000425876 K7EP34 96 aa9.65□□□□□ -0.86
CDK3-201ENST00000425876 C2orf82Q6UX34 121 aa9.65□□□□□ -0.86
CDK3-201ENST00000425876 APLNQ9ULZ1 77 aa9.64□□□□□ -0.87
CDK3-201ENST00000425876 SPCS1Q9Y6A9 102 aa9.64□□□□□ -0.87
CDK3-201ENST00000425876 MUC7Q8TAX7 377 aa9.63□□□□□ -0.87
CDK3-201ENST00000425876 NUPR2A6NF83 97 aa9.63□□□□□ -0.87
CDK3-201ENST00000425876 LYRM7Q5U5X0 104 aa9.63□□□□□ -0.87
CDK3-201ENST00000425876 GVQW2A0A096LPI5 108 aaPredicted RBP9.62□□□□□ -0.87
CDK3-201ENST00000425876 LOC107984156A0A0G2JMH3 177 aa9.62□□□□□ -0.87
CDK3-201ENST00000425876 PFN2P35080 140 aa9.62□□□□□ -0.87
CDK3-201ENST00000425876 ARL17AQ8IVW1 177 aa9.62□□□□□ -0.87
CDK3-201ENST00000425876 NTN5Q8WTR8 489 aaPredicted RBP9.62□□□□□ -0.87
CDK3-201ENST00000425876 IGKV2D-24A0A075B6R9 120 aa9.61□□□□□ -0.87
CDK3-201ENST00000425876 F8WDY8 70 aa9.6□□□□□ -0.87
CDK3-201ENST00000425876 RMI2Q96E14 147 aa9.6□□□□□ -0.87
CDK3-201ENST00000425876 DNAH7Q8WXX0 4024 aa9.6□□□□□ -0.87
CDK3-201ENST00000425876 UNQ6190/PRO20217Q6UXQ8 127 aa9.59□□□□□ -0.87
CDK3-201ENST00000425876 C6orf223Q8N319 242 aa9.59□□□□□ -0.87
CDK3-201ENST00000425876 C15orf56Q8N910 161 aa9.59□□□□□ -0.87
CDK3-201ENST00000425876 C2orf48Q96LS8 159 aa9.59□□□□□ -0.87
CDK3-201ENST00000425876 ZNF561-AS1K7EIQ3 104 aa9.58□□□□□ -0.88
CDK3-201ENST00000425876 SND1-IT1Q9HBX3 110 aa9.58□□□□□ -0.88
CDK3-201ENST00000425876 TRBV30A0A0K0K1B3 111 aa9.58□□□□□ -0.88
CDK3-201ENST00000425876 C10orf25Q5T742 122 aa9.58□□□□□ -0.88
CDK3-201ENST00000425876 Q9HAA7 133 aa9.58□□□□□ -0.88
CDK3-201ENST00000425876 TRAV13-2A0A0B4J235 113 aa9.57□□□□□ -0.88
CDK3-201ENST00000425876 RPL13AP40429 203 aaKnown RBP9.57□□□□□ -0.88
CDK3-201ENST00000425876 Q1RN00 199 aa9.57□□□□□ -0.88
CDK3-201ENST00000425876 TRBV20-1A0A075B6N2 111 aa9.56□□□□□ -0.88
CDK3-201ENST00000425876 UBE2DNLQ8IWF7 75 aa9.56□□□□□ -0.88
CDK3-201ENST00000425876 LINC00526Q96FQ7 95 aa9.56□□□□□ -0.88
CDK3-201ENST00000425876 DNAH1Q9P2D7 4330 aa9.56□□□□□ -0.88
CDK3-201ENST00000425876 H7C2G1 150 aa9.55□□□□□ -0.88
CDK3-201ENST00000425876 PSMB2P49721 201 aa9.55□□□□□ -0.88
CDK3-201ENST00000425876 C9orf116Q5BN46 136 aaPredicted RBP9.55□□□□□ -0.88
CDK3-201ENST00000425876 NDUFC2O95298 119 aa9.54□□□□□ -0.88
CDK3-201ENST00000425876 SCGB1C2P0DMR2 95 aa9.54□□□□□ -0.88
CDK3-201ENST00000425876 HIGD2BQ4VC39 106 aa9.54□□□□□ -0.88
CDK3-201ENST00000425876 CAMK2N2Q96S95 79 aa9.54□□□□□ -0.88
CDK3-201ENST00000425876 C6orf48Q9UBA6 75 aa9.54□□□□□ -0.88
CDK3-201ENST00000425876 IGKV2-28A0A075B6P5 120 aa9.54□□□□□ -0.88
CDK3-201ENST00000425876 IGKV2D-28P01615 120 aa9.54□□□□□ -0.88
CDK3-201ENST00000425876 CSMD3Q7Z407 3707 aa9.53□□□□□ -0.88
CDK3-201ENST00000425876 TRIAP1O43715 76 aa9.53□□□□□ -0.88
CDK3-201ENST00000425876 COX6CP09669 75 aa9.53□□□□□ -0.88
CDK3-201ENST00000425876 H3BMG7 143 aa9.52□□□□□ -0.89
CDK3-201ENST00000425876 LINC00337Q8N6G1 96 aa9.52□□□□□ -0.89
CDK3-201ENST00000425876 WWC2-AS2Q96NR7 200 aa9.52□□□□□ -0.89
CDK3-201ENST00000425876 TCL1BO95988 128 aa9.51□□□□□ -0.89
CDK3-201ENST00000425876 Q6ZRU5 148 aa9.5□□□□□ -0.89
CDK3-201ENST00000425876 PLECQ15149 4684 aaKnown RBP9.5□□□□□ -0.89
CDK3-201ENST00000425876 KMT2CQ8NEZ4 4911 aaKnown RBP9.5□□□□□ -0.89
CDK3-201ENST00000425876 F8W1H4 67 aa9.5□□□□□ -0.89
CDK3-201ENST00000425876 SYCNQ0VAF6 134 aa9.5□□□□□ -0.89
CDK3-201ENST00000425876 RNF151Q2KHN1 245 aa9.5□□□□□ -0.89
CDK3-201ENST00000425876 KRTAP1-5Q9BYS1 174 aa9.5□□□□□ -0.89
CDK3-201ENST00000425876 USP17L23D6RBM5 183 aa9.49□□□□□ -0.89
CDK3-201ENST00000425876 TTC32Q5I0X7 151 aa9.49□□□□□ -0.89
CDK3-201ENST00000425876 RPL28P46779 137 aaKnown RBP9.48□□□□□ -0.89
CDK3-201ENST00000425876 NDUFC2-KCTD14E9PQ53 114 aa9.47□□□□□ -0.89
CDK3-201ENST00000425876 ATXN8Q156A1 80 aa9.47□□□□□ -0.89
CDK3-201ENST00000425876 CASC10Q5T4H9 136 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 108.5 ms