RNA–Protein interactions for RNA: ENST00000422875.5

TRAPPC10-203, Transcript of trafficking protein particle complex 10, humanhuman

TSL 1 (best)

Gene TRAPPC10, Length 5,267 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC10-203ENST00000422875 KIF25-AS1Q9Y6Z4 181 aa12.57□□□□□ -0.4
TRAPPC10-203ENST00000422875 SMCPP49901 116 aaPredicted RBP12.57□□□□□ -0.4
TRAPPC10-203ENST00000422875 COX17Q14061 63 aa12.55□□□□□ -0.4
TRAPPC10-203ENST00000422875 TRBV10-3A0A0K0K1G6 114 aa12.54□□□□□ -0.4
TRAPPC10-203ENST00000422875 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.54□□□□□ -0.4
TRAPPC10-203ENST00000422875 LRCOL1A6NCL2 159 aa12.53□□□□□ -0.4
TRAPPC10-203ENST00000422875 LINC00846Q9NV44 126 aa12.53□□□□□ -0.4
TRAPPC10-203ENST00000422875 FAM30AQ9NZY2 134 aa12.53□□□□□ -0.4
TRAPPC10-203ENST00000422875 COL5A1P20908 1838 aaPredicted RBP12.52□□□□□ -0.4
TRAPPC10-203ENST00000422875 EPG5Q9HCE0 2579 aa12.52□□□□□ -0.4
TRAPPC10-203ENST00000422875 HILS1P60008 231 aa12.52□□□□□ -0.41
TRAPPC10-203ENST00000422875 SOSTDC1Q6X4U4 206 aa12.51□□□□□ -0.41
TRAPPC10-203ENST00000422875 LINC00337Q8N6G1 96 aa12.51□□□□□ -0.41
TRAPPC10-203ENST00000422875 LOC107984640A0A0U1RRK4 108 aa12.51□□□□□ -0.41
TRAPPC10-203ENST00000422875 A8MTW9 85 aa12.51□□□□□ -0.41
TRAPPC10-203ENST00000422875 CSDC2Q9Y534 153 aaKnown RBP12.51□□□□□ -0.41
TRAPPC10-203ENST00000422875 USP24Q9UPU5 2620 aa12.51□□□□□ -0.41
TRAPPC10-203ENST00000422875 TRAV7A0A075B6U4 112 aa12.5□□□□□ -0.41
TRAPPC10-203ENST00000422875 KRTAP10-9P60411 292 aa12.5□□□□□ -0.41
TRAPPC10-203ENST00000422875 PLA2G2AP14555 144 aa12.5□□□□□ -0.41
TRAPPC10-203ENST00000422875 Q8N3U1 123 aa12.5□□□□□ -0.41
TRAPPC10-203ENST00000422875 PRO0461Q9UI25 63 aa12.5□□□□□ -0.41
TRAPPC10-203ENST00000422875 C4orf48Q5BLP8 95 aa12.49□□□□□ -0.41
TRAPPC10-203ENST00000422875 ZNF843Q8N446 348 aa12.49□□□□□ -0.41
TRAPPC10-203ENST00000422875 ANKRD17O75179 2603 aaKnown RBP12.49□□□□□ -0.41
TRAPPC10-203ENST00000422875 LINC00315P59091 139 aa12.49□□□□□ -0.41
TRAPPC10-203ENST00000422875 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.49□□□□□ -0.41
TRAPPC10-203ENST00000422875 ATP5EP56381 51 aaPredicted RBP12.49□□□□□ -0.41
TRAPPC10-203ENST00000422875 SMIM26A0A096LP01 95 aa12.48□□□□□ -0.41
TRAPPC10-203ENST00000422875 DHRS4-AS1Q9P1J3 65 aa12.48□□□□□ -0.41
TRAPPC10-203ENST00000422875 FHL2Q14192 279 aa12.48□□□□□ -0.41
TRAPPC10-203ENST00000422875 BEAN1Q3B7T3 259 aa12.48□□□□□ -0.41
TRAPPC10-203ENST00000422875 C14orf177Q52M58 125 aa12.48□□□□□ -0.41
TRAPPC10-203ENST00000422875 Q8N2B8 174 aa12.47□□□□□ -0.41
TRAPPC10-203ENST00000422875 SPINK6Q6UWN8 80 aa12.46□□□□□ -0.42
TRAPPC10-203ENST00000422875 C6orf223Q8N319 242 aa12.46□□□□□ -0.42
TRAPPC10-203ENST00000422875 LINC01546A6NGU7 62 aa12.45□□□□□ -0.42
TRAPPC10-203ENST00000422875 KIR2DL5BQ8NHK3 375 aa12.45□□□□□ -0.42
TRAPPC10-203ENST00000422875 Q9UF83 564 aa12.44□□□□□ -0.42
TRAPPC10-203ENST00000422875 V9GYY9 64 aa12.44□□□□□ -0.42
TRAPPC10-203ENST00000422875 MRPL55Q7Z7F7 128 aaKnown RBP12.44□□□□□ -0.42
TRAPPC10-203ENST00000422875 BRI3O95415 125 aa12.44□□□□□ -0.42
TRAPPC10-203ENST00000422875 IGLV1-51P01701 117 aa12.44□□□□□ -0.42
TRAPPC10-203ENST00000422875 OXLD1Q5BKU9 147 aa12.43□□□□□ -0.42
TRAPPC10-203ENST00000422875 BPTFQ12830 3046 aa12.43□□□□□ -0.42
TRAPPC10-203ENST00000422875 LY6G6DO95868 133 aa12.42□□□□□ -0.42
TRAPPC10-203ENST00000422875 A6NED7 52 aa12.42□□□□□ -0.42
TRAPPC10-203ENST00000422875 IGHV4-30-4P0DP06 118 aa12.42□□□□□ -0.42
TRAPPC10-203ENST00000422875 NANOS2P60321 138 aaKnown RBP12.41□□□□□ -0.42
TRAPPC10-203ENST00000422875 MUC7Q8TAX7 377 aa12.41□□□□□ -0.42
TRAPPC10-203ENST00000422875 EGFEM1PQ0D2K5 195 aa12.41□□□□□ -0.42
TRAPPC10-203ENST00000422875 SERP1Q9Y6X1 66 aa12.41□□□□□ -0.42
TRAPPC10-203ENST00000422875 C1orf137Q5JT78 98 aa12.4□□□□□ -0.42
TRAPPC10-203ENST00000422875 SMR3AQ99954 134 aa12.4□□□□□ -0.42
TRAPPC10-203ENST00000422875 TRBV7-7A0A0K0K1E9 115 aa12.4□□□□□ -0.42
TRAPPC10-203ENST00000422875 CASC2Q6XLA1 102 aa12.39□□□□□ -0.43
TRAPPC10-203ENST00000422875 TRAV10A0A0B4J240 114 aa12.39□□□□□ -0.43
TRAPPC10-203ENST00000422875 C5orf42Q9H799 3197 aa12.39□□□□□ -0.43
TRAPPC10-203ENST00000422875 Q6ZVQ6 151 aa12.38□□□□□ -0.43
TRAPPC10-203ENST00000422875 LINC00208Q96KT6 92 aa12.38□□□□□ -0.43
TRAPPC10-203ENST00000422875 IGLV5-39A0A0G2JS06 123 aa12.38□□□□□ -0.43
TRAPPC10-203ENST00000422875 SEC61GP60059 68 aa12.38□□□□□ -0.43
TRAPPC10-203ENST00000422875 LINC00575Q6W349 94 aa12.38□□□□□ -0.43
TRAPPC10-203ENST00000422875 C1orf195Q5TG92 126 aa12.37□□□□□ -0.43
TRAPPC10-203ENST00000422875 RETNQ9HD89 108 aa12.37□□□□□ -0.43
TRAPPC10-203ENST00000422875 C11orf72Q8NBR9 251 aa12.36□□□□□ -0.43
TRAPPC10-203ENST00000422875 IGLV9-49A0A0B4J1Y8 123 aa12.35□□□□□ -0.43
TRAPPC10-203ENST00000422875 Q8N9L7 120 aa12.34□□□□□ -0.43
TRAPPC10-203ENST00000422875 FLNBO75369 2602 aaKnown RBP12.34□□□□□ -0.43
TRAPPC10-203ENST00000422875 IGHV3OR16-9A0A0B4J2B5 98 aa12.34□□□□□ -0.43
TRAPPC10-203ENST00000422875 FAM218AQ96MZ4 157 aa12.34□□□□□ -0.43
TRAPPC10-203ENST00000422875 A0A1B0GUV1 79 aa12.33□□□□□ -0.43
TRAPPC10-203ENST00000422875 PRYO14603 147 aa12.33□□□□□ -0.44
TRAPPC10-203ENST00000422875 LINC01547P58512 204 aaPredicted RBP12.33□□□□□ -0.44
TRAPPC10-203ENST00000422875 M0R2N4 97 aa12.32□□□□□ -0.44
TRAPPC10-203ENST00000422875 SHISA2Q6UWI4 295 aa12.32□□□□□ -0.44
TRAPPC10-203ENST00000422875 FAM19A4Q96LR4 140 aa12.32□□□□□ -0.44
TRAPPC10-203ENST00000422875 TMEM254Q8TBM7 123 aa12.32□□□□□ -0.44
TRAPPC10-203ENST00000422875 Q6ZTC4 211 aa12.31□□□□□ -0.44
TRAPPC10-203ENST00000422875 DEFB116Q30KQ4 102 aa12.31□□□□□ -0.44
TRAPPC10-203ENST00000422875 CFAP54Q96N23 3096 aa12.29□□□□□ -0.44
TRAPPC10-203ENST00000422875 PSPHP1O15172 72 aa12.29□□□□□ -0.44
TRAPPC10-203ENST00000422875 PLAC8L1A1L4L8 177 aa12.29□□□□□ -0.44
TRAPPC10-203ENST00000422875 LAMA2P24043 3122 aaKnown RBP12.28□□□□□ -0.44
TRAPPC10-203ENST00000422875 CHD7Q9P2D1 2997 aa12.27□□□□□ -0.45
TRAPPC10-203ENST00000422875 SBSPONQ8IVN8 264 aa12.27□□□□□ -0.45
TRAPPC10-203ENST00000422875 A0A087WSZ3 146 aa12.26□□□□□ -0.45
TRAPPC10-203ENST00000422875 Q6ZRU5 148 aa12.25□□□□□ -0.45
TRAPPC10-203ENST00000422875 MGAM2Q2M2H8 2515 aa12.25□□□□□ -0.45
TRAPPC10-203ENST00000422875 PMAIP1Q13794 54 aa12.24□□□□□ -0.45
TRAPPC10-203ENST00000422875 ATRQ13535 2644 aa12.24□□□□□ -0.45
TRAPPC10-203ENST00000422875 RANBP2P49792 3224 aaKnown RBP12.23□□□□□ -0.45
TRAPPC10-203ENST00000422875 CENPEQ02224 2701 aa12.23□□□□□ -0.45
TRAPPC10-203ENST00000422875 IGLV5-45A0A087WSX0 123 aa12.23□□□□□ -0.45
TRAPPC10-203ENST00000422875 PRR15LQ9BU68 103 aa12.23□□□□□ -0.45
TRAPPC10-203ENST00000422875 CRYGAP11844 174 aa12.22□□□□□ -0.45
TRAPPC10-203ENST00000422875 REG3GQ6UW15 175 aa12.22□□□□□ -0.45
TRAPPC10-203ENST00000422875 LYPD5Q6UWN5 251 aa12.22□□□□□ -0.45
TRAPPC10-203ENST00000422875 BRCA2P51587 3418 aa12.21□□□□□ -0.45
TRAPPC10-203ENST00000422875 TRBV7-6A0A0J9YX20 115 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 101.8 ms