RNA–Protein interactions for RNA: ENST00000421223.5

DDX56-203, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 3,028 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-203ENST00000421223 COL6A5A8TX70 2615 aa7.63□□□□□ -1.19
DDX56-203ENST00000421223 COX6CP09669 75 aa7.63□□□□□ -1.19
DDX56-203ENST00000421223 C6orf226Q5I0X4 101 aa7.63□□□□□ -1.19
DDX56-203ENST00000421223 PKD1L1Q8TDX9 2849 aa7.63□□□□□ -1.19
DDX56-203ENST00000421223 ANGP03950 147 aaKnown RBP7.62□□□□□ -1.19
DDX56-203ENST00000421223 NHLRC4P0CG21 123 aaPredicted RBP7.62□□□□□ -1.19
DDX56-203ENST00000421223 LINC00269Q8N2A0 174 aa7.62□□□□□ -1.19
DDX56-203ENST00000421223 LINC00959A0A1B0GUT2 108 aa7.62□□□□□ -1.19
DDX56-203ENST00000421223 MIR7-3HGQ8N6C7 128 aa7.62□□□□□ -1.19
DDX56-203ENST00000421223 ANKRD29Q8N6D5 301 aa7.62□□□□□ -1.19
DDX56-203ENST00000421223 RETNQ9HD89 108 aa7.62□□□□□ -1.19
DDX56-203ENST00000421223 XGP55808 180 aa7.62□□□□□ -1.19
DDX56-203ENST00000421223 V9GYY9 64 aa7.62□□□□□ -1.19
DDX56-203ENST00000421223 ATXN8Q156A1 80 aa7.61□□□□□ -1.19
DDX56-203ENST00000421223 IFITM1P13164 125 aa7.61□□□□□ -1.19
DDX56-203ENST00000421223 OR13C6PQ8NH95 151 aa7.61□□□□□ -1.19
DDX56-203ENST00000421223 ATP5G1P05496 136 aa7.6□□□□□ -1.19
DDX56-203ENST00000421223 SS18Q15532 418 aa7.6□□□□□ -1.19
DDX56-203ENST00000421223 LINC01620Q4KN68 170 aa7.6□□□□□ -1.19
DDX56-203ENST00000421223 C2orf82Q6UX34 121 aa7.6□□□□□ -1.19
DDX56-203ENST00000421223 IGHV3OR16-9A0A0B4J2B5 98 aa7.6□□□□□ -1.19
DDX56-203ENST00000421223 TRBV30A0A0K0K1B3 111 aa7.6□□□□□ -1.19
DDX56-203ENST00000421223 LYRM9A8MSI8 78 aa7.6□□□□□ -1.19
DDX56-203ENST00000421223 H7C423 109 aa7.6□□□□□ -1.19
DDX56-203ENST00000421223 TIMM17BO60830 172 aa7.6□□□□□ -1.19
DDX56-203ENST00000421223 NTN5Q8WTR8 489 aaPredicted RBP7.6□□□□□ -1.19
DDX56-203ENST00000421223 FBN1P35555 2871 aaKnown RBP7.59□□□□□ -1.19
DDX56-203ENST00000421223 SPART-AS1P0CW21 52 aa7.59□□□□□ -1.19
DDX56-203ENST00000421223 LINC01600Q96MT4 127 aa7.59□□□□□ -1.19
DDX56-203ENST00000421223 LINC00612Q8N6U2 182 aa7.58□□□□□ -1.2
DDX56-203ENST00000421223 LINC00526Q96FQ7 95 aa7.58□□□□□ -1.2
DDX56-203ENST00000421223 Q8NAQ8 132 aa7.57□□□□□ -1.2
DDX56-203ENST00000421223 MALP21145 153 aa7.57□□□□□ -1.2
DDX56-203ENST00000421223 HRCT1Q6UXD1 115 aa7.57□□□□□ -1.2
DDX56-203ENST00000421223 FAM19A3Q7Z5A8 133 aa7.57□□□□□ -1.2
DDX56-203ENST00000421223 SND1-IT1Q9HBX3 110 aa7.57□□□□□ -1.2
DDX56-203ENST00000421223 A0A087WZ39 114 aa7.57□□□□□ -1.2
DDX56-203ENST00000421223 TEX49A0A1B0GTD5 131 aa7.57□□□□□ -1.2
DDX56-203ENST00000421223 PRB2P02812 416 aaPredicted RBP7.56□□□□□ -1.2
DDX56-203ENST00000421223 MIFP14174 115 aa7.56□□□□□ -1.2
DDX56-203ENST00000421223 KRTAP24-1Q3LI83 254 aa7.56□□□□□ -1.2
DDX56-203ENST00000421223 KLK12Q9UKR0 248 aa7.56□□□□□ -1.2
DDX56-203ENST00000421223 REG3AQ06141 175 aa7.55□□□□□ -1.2
DDX56-203ENST00000421223 WFDC9Q8NEX5 89 aa7.55□□□□□ -1.2
DDX56-203ENST00000421223 COPS9Q8WXC6 57 aa7.55□□□□□ -1.2
DDX56-203ENST00000421223 CHCHD10Q8WYQ3 142 aaPredicted RBP7.55□□□□□ -1.2
DDX56-203ENST00000421223 CRPP02741 224 aa7.54□□□□□ -1.2
DDX56-203ENST00000421223 NDUFV3P56181 108 aaKnown RBP7.54□□□□□ -1.2
DDX56-203ENST00000421223 KRTAP10-11P60412 298 aa7.54□□□□□ -1.2
DDX56-203ENST00000421223 TMEM126AQ9H061 195 aa7.54□□□□□ -1.2
DDX56-203ENST00000421223 TENM3Q9P273 2699 aa7.54□□□□□ -1.2
DDX56-203ENST00000421223 TRBV10-2A0A0K0K1G8 114 aa7.54□□□□□ -1.2
DDX56-203ENST00000421223 C9orf116Q5BN46 136 aaPredicted RBP7.54□□□□□ -1.2
DDX56-203ENST00000421223 TTC32Q5I0X7 151 aa7.54□□□□□ -1.2
DDX56-203ENST00000421223 CCL18P55774 89 aa7.54□□□□□ -1.2
DDX56-203ENST00000421223 ZNF561-AS1K7EIQ3 104 aa7.53□□□□□ -1.2
DDX56-203ENST00000421223 A0A1B0GUV1 79 aa7.53□□□□□ -1.2
DDX56-203ENST00000421223 J3KT08 172 aa7.53□□□□□ -1.2
DDX56-203ENST00000421223 COX7A2LO14548 114 aa7.53□□□□□ -1.2
DDX56-203ENST00000421223 PRR3P79522 188 aaKnown RBP7.53□□□□□ -1.2
DDX56-203ENST00000421223 C4orf26Q17RF5 130 aa7.53□□□□□ -1.2
DDX56-203ENST00000421223 LINC00337Q8N6G1 96 aa7.52□□□□□ -1.21
DDX56-203ENST00000421223 Q9HAA7 133 aa7.52□□□□□ -1.21
DDX56-203ENST00000421223 NBEAL1Q6ZS30 2694 aa7.52□□□□□ -1.21
DDX56-203ENST00000421223 LST1O00453 97 aa7.52□□□□□ -1.21
DDX56-203ENST00000421223 UBE2WQ96B02 151 aa7.52□□□□□ -1.21
DDX56-203ENST00000421223 MGAM2Q2M2H8 2515 aa7.51□□□□□ -1.21
DDX56-203ENST00000421223 Q6ZTC4 211 aa7.5□□□□□ -1.21
DDX56-203ENST00000421223 C6orf223Q8N319 242 aa7.5□□□□□ -1.21
DDX56-203ENST00000421223 BAHCC1Q9P281 2608 aa7.5□□□□□ -1.21
DDX56-203ENST00000421223 IGKV2-28A0A075B6P5 120 aa7.5□□□□□ -1.21
DDX56-203ENST00000421223 IBA57-AS1B1ANH7 110 aa7.5□□□□□ -1.21
DDX56-203ENST00000421223 IGKV2D-28P01615 120 aa7.5□□□□□ -1.21
DDX56-203ENST00000421223 CD164L2Q6UWJ8 174 aa7.5□□□□□ -1.21
DDX56-203ENST00000421223 TRAV13-2A0A0B4J235 113 aa7.49□□□□□ -1.21
DDX56-203ENST00000421223 C4orf48Q5BLP8 95 aa7.49□□□□□ -1.21
DDX56-203ENST00000421223 FAM218AQ96MZ4 157 aa7.49□□□□□ -1.21
DDX56-203ENST00000421223 H3BT86 120 aa7.49□□□□□ -1.21
DDX56-203ENST00000421223 GAGE2BQ13066 116 aa7.49□□□□□ -1.21
DDX56-203ENST00000421223 GAGE2EQ4V326 116 aa7.49□□□□□ -1.21
DDX56-203ENST00000421223 GAGE2DQ9UEU5 116 aa7.49□□□□□ -1.21
DDX56-203ENST00000421223 SMIM11BQ8TCY0 68 aa7.48□□□□□ -1.21
DDX56-203ENST00000421223 NANOS2P60321 138 aaKnown RBP7.48□□□□□ -1.21
DDX56-203ENST00000421223 KPRPQ5T749 579 aaPredicted RBP7.48□□□□□ -1.21
DDX56-203ENST00000421223 LELP1Q5T871 98 aa7.48□□□□□ -1.21
DDX56-203ENST00000421223 A0A0J9YWU9 116 aa7.47□□□□□ -1.21
DDX56-203ENST00000421223 LYPD5Q6UWN5 251 aa7.47□□□□□ -1.21
DDX56-203ENST00000421223 TRAV8-4A0A0B4J246 113 aa7.47□□□□□ -1.21
DDX56-203ENST00000421223 DEFB121Q5J5C9 76 aa7.47□□□□□ -1.21
DDX56-203ENST00000421223 UNQ6190/PRO20217Q6UXQ8 127 aa7.47□□□□□ -1.21
DDX56-203ENST00000421223 WFDC10BQ8IUB3 73 aa7.47□□□□□ -1.21
DDX56-203ENST00000421223 Q8IZM0 81 aa7.47□□□□□ -1.21
DDX56-203ENST00000421223 BAALC-AS2P0C853 105 aa7.46□□□□□ -1.21
DDX56-203ENST00000421223 C10orf25Q5T742 122 aa7.46□□□□□ -1.21
DDX56-203ENST00000421223 FAM236DA0A1B0GTK5 79 aa7.46□□□□□ -1.22
DDX56-203ENST00000421223 FAM236CP0DP71 79 aa7.46□□□□□ -1.22
DDX56-203ENST00000421223 SPAG11BQ08648 103 aa7.46□□□□□ -1.22
DDX56-203ENST00000421223 DNAL4O96015 105 aa7.46□□□□□ -1.22
DDX56-203ENST00000421223 KLK5Q9Y337 293 aaPredicted RBP7.46□□□□□ -1.22
DDX56-203ENST00000421223 SLPIP03973 132 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 383 ms