RNA–Protein interactions for RNA: ENST00000420013.5

MCF2L-212, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 566 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-212ENST00000420013 IGIPA6NJ69 53 aa12.41□□□□□ -0.42
MCF2L-212ENST00000420013 SNAPINO95295 136 aa12.41□□□□□ -0.42
MCF2L-212ENST00000420013 SEC11AP67812 179 aa12.41□□□□□ -0.42
MCF2L-212ENST00000420013 COX19Q49B96 90 aa12.41□□□□□ -0.42
MCF2L-212ENST00000420013 LINC00173Q6ZV60 143 aa12.41□□□□□ -0.42
MCF2L-212ENST00000420013 H0Y9J4 135 aa12.4□□□□□ -0.42
MCF2L-212ENST00000420013 C6orf226Q5I0X4 101 aa12.4□□□□□ -0.42
MCF2L-212ENST00000420013 FAM19A3Q7Z5A8 133 aa12.4□□□□□ -0.42
MCF2L-212ENST00000420013 GNB1LQ9BYB4 327 aa12.4□□□□□ -0.42
MCF2L-212ENST00000420013 HERVK_113P63121 156 aa12.39□□□□□ -0.43
MCF2L-212ENST00000420013 SLC7A5P1Q8MH63 180 aa12.39□□□□□ -0.43
MCF2L-212ENST00000420013 SCGB3A1Q96QR1 104 aa12.39□□□□□ -0.43
MCF2L-212ENST00000420013 UBE2BP63146 152 aa12.38□□□□□ -0.43
MCF2L-212ENST00000420013 Q8IZM0 81 aa12.38□□□□□ -0.43
MCF2L-212ENST00000420013 TOMM6Q96B49 74 aa12.38□□□□□ -0.43
MCF2L-212ENST00000420013 TIMM17AQ99595 171 aa12.38□□□□□ -0.43
MCF2L-212ENST00000420013 ALKBH7Q9BT30 221 aaPredicted RBP12.38□□□□□ -0.43
MCF2L-212ENST00000420013 KRTAP11-1Q8IUC1 163 aa12.36□□□□□ -0.43
MCF2L-212ENST00000420013 KRTAP7-1Q8IUC3 87 aa12.36□□□□□ -0.43
MCF2L-212ENST00000420013 RNF213Q63HN8 5207 aa12.35□□□□□ -0.43
MCF2L-212ENST00000420013 IGLV1-50A0A075B6I6 118 aa12.35□□□□□ -0.43
MCF2L-212ENST00000420013 C9orf129Q5T035 196 aaKnown RBP12.35□□□□□ -0.43
MCF2L-212ENST00000420013 ERASQ7Z444 233 aa12.35□□□□□ -0.43
MCF2L-212ENST00000420013 SMCO4Q9NRQ5 59 aa12.35□□□□□ -0.43
MCF2L-212ENST00000420013 LINC00469Q8N7U9 141 aa12.34□□□□□ -0.43
MCF2L-212ENST00000420013 CDKN2A-AS1Q9UH64 79 aa12.34□□□□□ -0.43
MCF2L-212ENST00000420013 LINC01549A6NIU2 74 aa12.33□□□□□ -0.44
MCF2L-212ENST00000420013 FABP9Q0Z7S8 132 aa12.33□□□□□ -0.44
MCF2L-212ENST00000420013 FA2HQ7L5A8 372 aa12.33□□□□□ -0.44
MCF2L-212ENST00000420013 CXCL5P42830 114 aa12.32□□□□□ -0.44
MCF2L-212ENST00000420013 PRR26Q8N8Z3 221 aa12.32□□□□□ -0.44
MCF2L-212ENST00000420013 MRPL18Q9H0U6 180 aaKnown RBP12.32□□□□□ -0.44
MCF2L-212ENST00000420013 F8VRH5 84 aa12.3□□□□□ -0.44
MCF2L-212ENST00000420013 KRTAP1-4P0C5Y4 121 aa12.3□□□□□ -0.44
MCF2L-212ENST00000420013 NUPR1O60356 82 aa12.29□□□□□ -0.44
MCF2L-212ENST00000420013 RPL13AP40429 203 aaKnown RBP12.29□□□□□ -0.44
MCF2L-212ENST00000420013 TINCRA0A1B0GVN0 87 aa12.27□□□□□ -0.45
MCF2L-212ENST00000420013 LBHQ53QV2 105 aaPredicted RBP12.27□□□□□ -0.45
MCF2L-212ENST00000420013 XAGE1AQ9HD64 81 aa12.27□□□□□ -0.45
MCF2L-212ENST00000420013 TP73-AS1Q9UF72 201 aa12.27□□□□□ -0.45
MCF2L-212ENST00000420013 TRAPPC1Q9Y5R8 145 aa12.27□□□□□ -0.45
MCF2L-212ENST00000420013 CST9LQ9H4G1 147 aa12.26□□□□□ -0.45
MCF2L-212ENST00000420013 PMVKQ15126 192 aa12.25□□□□□ -0.45
MCF2L-212ENST00000420013 PDZD11Q5EBL8 140 aa12.25□□□□□ -0.45
MCF2L-212ENST00000420013 COX7B2Q8TF08 81 aa12.25□□□□□ -0.45
MCF2L-212ENST00000420013 LINC01546A6NGU7 62 aa12.24□□□□□ -0.45
MCF2L-212ENST00000420013 SMIM1B2RUZ4 78 aa12.24□□□□□ -0.45
MCF2L-212ENST00000420013 ZNF861PO60384 105 aa12.24□□□□□ -0.45
MCF2L-212ENST00000420013 NDUFA6P56556 154 aa12.24□□□□□ -0.45
MCF2L-212ENST00000420013 C22orf24Q9Y442 160 aa12.24□□□□□ -0.45
MCF2L-212ENST00000420013 IGLV5-45A0A087WSX0 123 aa12.23□□□□□ -0.45
MCF2L-212ENST00000420013 H3BRM9 83 aa12.23□□□□□ -0.45
MCF2L-212ENST00000420013 SPINK8P0C7L1 97 aa12.22□□□□□ -0.45
MCF2L-212ENST00000420013 MRPL55Q7Z7F7 128 aaKnown RBP12.21□□□□□ -0.45
MCF2L-212ENST00000420013 YPEL4Q96NS1 127 aa12.21□□□□□ -0.45
MCF2L-212ENST00000420013 RAB5BP61020 215 aa12.19□□□□□ -0.46
MCF2L-212ENST00000420013 CBLN2Q8IUK8 224 aa12.19□□□□□ -0.46
MCF2L-212ENST00000420013 LPAP08519 4548 aa12.19□□□□□ -0.46
MCF2L-212ENST00000420013 C18orf32Q8TCD1 76 aa12.18□□□□□ -0.46
MCF2L-212ENST00000420013 ATP5LO75964 103 aa12.17□□□□□ -0.46
MCF2L-212ENST00000420013 LINC00614P0C842 121 aa12.17□□□□□ -0.46
MCF2L-212ENST00000420013 RPL28P46779 137 aaKnown RBP12.17□□□□□ -0.46
MCF2L-212ENST00000420013 BCE1O60756 84 aa12.16□□□□□ -0.46
MCF2L-212ENST00000420013 HBDP02042 147 aa12.16□□□□□ -0.46
MCF2L-212ENST00000420013 IGLV5-37A0A075B6J1 123 aa12.14□□□□□ -0.47
MCF2L-212ENST00000420013 PMCHL1Q16048 86 aa12.13□□□□□ -0.47
MCF2L-212ENST00000420013 NKAPP1Q8N9T2 125 aa12.13□□□□□ -0.47
MCF2L-212ENST00000420013 IGLC3P0DOY3 106 aa12.12□□□□□ -0.47
MCF2L-212ENST00000420013 URB1-AS1Q96HZ7 61 aa12.12□□□□□ -0.47
MCF2L-212ENST00000420013 GAGE10A6NGK3 116 aa12.11□□□□□ -0.47
MCF2L-212ENST00000420013 RPL37AP8A6NKH3 93 aa12.11□□□□□ -0.47
MCF2L-212ENST00000420013 LINC00167Q96N53 147 aa12.11□□□□□ -0.47
MCF2L-212ENST00000420013 PFN2P35080 140 aa12.1□□□□□ -0.47
MCF2L-212ENST00000420013 BAGE3Q86Y29 109 aa12.1□□□□□ -0.47
MCF2L-212ENST00000420013 A0A096LNJ9 63 aa12.09□□□□□ -0.47
MCF2L-212ENST00000420013 ZNF22P17026 224 aaPredicted RBP12.08□□□□□ -0.48
MCF2L-212ENST00000420013 TMEM170BQ5T4T1 132 aa12.08□□□□□ -0.48
MCF2L-212ENST00000420013 IGLV5-39A0A0G2JS06 123 aa12.07□□□□□ -0.48
MCF2L-212ENST00000420013 CRYGAP11844 174 aa12.07□□□□□ -0.48
MCF2L-212ENST00000420013 PRR4Q16378 134 aa12.07□□□□□ -0.48
MCF2L-212ENST00000420013 COLCA2A8K830 154 aa12.06□□□□□ -0.48
MCF2L-212ENST00000420013 A0A087X002 238 aa12.05□□□□□ -0.48
MCF2L-212ENST00000420013 S100A1P23297 94 aa12.05□□□□□ -0.48
MCF2L-212ENST00000420013 KRTAP13-1Q8IUC0 172 aa12.05□□□□□ -0.48
MCF2L-212ENST00000420013 CHCHD1Q96BP2 118 aaKnown RBP12.05□□□□□ -0.48
MCF2L-212ENST00000420013 ERG28Q9UKR5 140 aa12.05□□□□□ -0.48
MCF2L-212ENST00000420013 UBE2AP49459 152 aa12.04□□□□□ -0.48
MCF2L-212ENST00000420013 SFTA2Q6UW10 78 aa12.04□□□□□ -0.48
MCF2L-212ENST00000420013 ZNF625Q96I27 306 aaPredicted RBP12.04□□□□□ -0.48
MCF2L-212ENST00000420013 CHTOPQ9Y3Y2 248 aaKnown RBP12.04□□□□□ -0.48
MCF2L-212ENST00000420013 C11orf86A6NJI1 115 aa12.03□□□□□ -0.48
MCF2L-212ENST00000420013 ATP6V1G1O75348 118 aa12.03□□□□□ -0.48
MCF2L-212ENST00000420013 SCO1O75880 301 aa12.03□□□□□ -0.48
MCF2L-212ENST00000420013 TRGC2P03986 189 aa12.03□□□□□ -0.48
MCF2L-212ENST00000420013 TYMSOSQ8TAI1 123 aa12.03□□□□□ -0.48
MCF2L-212ENST00000420013 COX17Q14061 63 aa12.02□□□□□ -0.49
MCF2L-212ENST00000420013 RPL24P83731 157 aaKnown RBP12.01□□□□□ -0.49
MCF2L-212ENST00000420013 FAM229BQ4G0N7 80 aa12.01□□□□□ -0.49
MCF2L-212ENST00000420013 SND1-IT1Q9HBX3 110 aa12.01□□□□□ -0.49
MCF2L-212ENST00000420013 IGKV2-28A0A075B6P5 120 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms