RNA–Protein interactions for RNA: ENST00000418188.1

CSPG4P3Y-201, Transcript of CSPG4 pseudogene 3 Y-linked, humanhuman

BASIC

Gene CSPG4P3Y, Length 3,724 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P3Y-201ENST00000418188 GCN1Q92616 2671 aaKnown RBP8.16□□□□□ -1.1
CSPG4P3Y-201ENST00000418188 FASNP49327 2511 aaKnown RBP8.16□□□□□ -1.1
CSPG4P3Y-201ENST00000418188 ANGP03950 147 aaKnown RBP8.16□□□□□ -1.1
CSPG4P3Y-201ENST00000418188 DAD1P61803 113 aa8.16□□□□□ -1.1
CSPG4P3Y-201ENST00000418188 C9orf66Q5T8R8 295 aa8.16□□□□□ -1.1
CSPG4P3Y-201ENST00000418188 IGKV2-28A0A075B6P5 120 aa8.16□□□□□ -1.1
CSPG4P3Y-201ENST00000418188 A0A1B0GUV1 79 aa8.16□□□□□ -1.1
CSPG4P3Y-201ENST00000418188 IGKV2D-28P01615 120 aa8.16□□□□□ -1.1
CSPG4P3Y-201ENST00000418188 LYRM9A8MSI8 78 aa8.15□□□□□ -1.1
CSPG4P3Y-201ENST00000418188 B5MCH6 92 aa8.15□□□□□ -1.1
CSPG4P3Y-201ENST00000418188 LECT2O14960 151 aa8.15□□□□□ -1.1
CSPG4P3Y-201ENST00000418188 ATP5G1P05496 136 aa8.15□□□□□ -1.1
CSPG4P3Y-201ENST00000418188 HTN3P15516 51 aa8.15□□□□□ -1.1
CSPG4P3Y-201ENST00000418188 APOC4P55056 127 aa8.15□□□□□ -1.1
CSPG4P3Y-201ENST00000418188 LINC00269Q8N2A0 174 aa8.15□□□□□ -1.1
CSPG4P3Y-201ENST00000418188 NBEAL2Q6ZNJ1 2754 aa8.15□□□□□ -1.1
CSPG4P3Y-201ENST00000418188 IGLV10-54A0A075B6I4 117 aa8.15□□□□□ -1.11
CSPG4P3Y-201ENST00000418188 HELZ2Q9BYK8 2649 aaKnown RBP8.15□□□□□ -1.11
CSPG4P3Y-201ENST00000418188 Q8IZM0 81 aa8.14□□□□□ -1.11
CSPG4P3Y-201ENST00000418188 LINC00643Q86TS7 51 aa8.14□□□□□ -1.11
CSPG4P3Y-201ENST00000418188 X6R8D5 127 aa8.14□□□□□ -1.11
CSPG4P3Y-201ENST00000418188 KMT2BQ9UMN6 2715 aaPredicted RBP8.14□□□□□ -1.11
CSPG4P3Y-201ENST00000418188 UNC79Q9P2D8 2635 aa8.13□□□□□ -1.11
CSPG4P3Y-201ENST00000418188 AKAP9Q99996 3911 aa8.13□□□□□ -1.11
CSPG4P3Y-201ENST00000418188 A0A087WYN8 130 aa8.13□□□□□ -1.11
CSPG4P3Y-201ENST00000418188 LINC00612Q8N6U2 182 aa8.12□□□□□ -1.11
CSPG4P3Y-201ENST00000418188 CD164L2Q6UWJ8 174 aa8.12□□□□□ -1.11
CSPG4P3Y-201ENST00000418188 CHCHD10Q8WYQ3 142 aaPredicted RBP8.12□□□□□ -1.11
CSPG4P3Y-201ENST00000418188 CXCL5P42830 114 aa8.11□□□□□ -1.11
CSPG4P3Y-201ENST00000418188 REG3AQ06141 175 aa8.11□□□□□ -1.11
CSPG4P3Y-201ENST00000418188 IMUPQ9GZP8 106 aa8.11□□□□□ -1.11
CSPG4P3Y-201ENST00000418188 TENM4Q6N022 2769 aa8.11□□□□□ -1.11
CSPG4P3Y-201ENST00000418188 NBPF19A0A087WUL8 3843 aa8.11□□□□□ -1.11
CSPG4P3Y-201ENST00000418188 FAM236AA0A1B0GUQ0 79 aa8.11□□□□□ -1.11
CSPG4P3Y-201ENST00000418188 FAM236BA0A1B0GV22 79 aa8.11□□□□□ -1.11
CSPG4P3Y-201ENST00000418188 LY6G6DO95868 133 aa8.11□□□□□ -1.11
CSPG4P3Y-201ENST00000418188 NHLRC4P0CG21 123 aaPredicted RBP8.11□□□□□ -1.11
CSPG4P3Y-201ENST00000418188 KRTAP10-3P60369 221 aa8.11□□□□□ -1.11
CSPG4P3Y-201ENST00000418188 ORMDL1Q9P0S3 153 aa8.11□□□□□ -1.11
CSPG4P3Y-201ENST00000418188 TRBV7-7A0A0K0K1E9 115 aa8.1□□□□□ -1.11
CSPG4P3Y-201ENST00000418188 C14orf132Q9NPU4 83 aa8.1□□□□□ -1.11
CSPG4P3Y-201ENST00000418188 IGHV4-28A0A0C4DH34 117 aa8.09□□□□□ -1.11
CSPG4P3Y-201ENST00000418188 S100A7L2Q5SY68 101 aa8.09□□□□□ -1.11
CSPG4P3Y-201ENST00000418188 SS18L2Q9UHA2 77 aa8.09□□□□□ -1.11
CSPG4P3Y-201ENST00000418188 CCDC179H3BU77 68 aa8.09□□□□□ -1.11
CSPG4P3Y-201ENST00000418188 TMEM126AQ9H061 195 aa8.09□□□□□ -1.11
CSPG4P3Y-201ENST00000418188 SLPIP03973 132 aa8.08□□□□□ -1.12
CSPG4P3Y-201ENST00000418188 LINC01561Q8N1V8 128 aa8.08□□□□□ -1.12
CSPG4P3Y-201ENST00000418188 SPART-AS1P0CW21 52 aa8.08□□□□□ -1.12
CSPG4P3Y-201ENST00000418188 HECTD1Q9ULT8 2610 aa8.08□□□□□ -1.12
CSPG4P3Y-201ENST00000418188 COX17Q14061 63 aa8.07□□□□□ -1.12
CSPG4P3Y-201ENST00000418188 INAFM1C9JVW0 142 aa8.07□□□□□ -1.12
CSPG4P3Y-201ENST00000418188 PDZD2O15018 2839 aa8.07□□□□□ -1.12
CSPG4P3Y-201ENST00000418188 PRR3P79522 188 aaKnown RBP8.06□□□□□ -1.12
CSPG4P3Y-201ENST00000418188 MIFP14174 115 aa8.06□□□□□ -1.12
CSPG4P3Y-201ENST00000418188 NCR3O14931 201 aa8.06□□□□□ -1.12
CSPG4P3Y-201ENST00000418188 SMCR5Q8TEV8 140 aa8.06□□□□□ -1.12
CSPG4P3Y-201ENST00000418188 SPAG11BQ08648 103 aa8.05□□□□□ -1.12
CSPG4P3Y-201ENST00000418188 C9orf116Q5BN46 136 aaPredicted RBP8.05□□□□□ -1.12
CSPG4P3Y-201ENST00000418188 Q8N3U1 123 aa8.04□□□□□ -1.12
CSPG4P3Y-201ENST00000418188 KLK12Q9UKR0 248 aa8.04□□□□□ -1.12
CSPG4P3Y-201ENST00000418188 NDUFC2O95298 119 aa8.04□□□□□ -1.12
CSPG4P3Y-201ENST00000418188 C22orf24Q9Y442 160 aa8.03□□□□□ -1.12
CSPG4P3Y-201ENST00000418188 SDIM1Q6ZPB5 146 aa8.03□□□□□ -1.12
CSPG4P3Y-201ENST00000418188 TMEM256-PLSCR3K7ERE1 68 aa8.03□□□□□ -1.12
CSPG4P3Y-201ENST00000418188 LELP1Q5T871 98 aa8.03□□□□□ -1.12
CSPG4P3Y-201ENST00000418188 CELA1Q9UNI1 258 aa8.03□□□□□ -1.12
CSPG4P3Y-201ENST00000418188 KLK5Q9Y337 293 aaPredicted RBP8.03□□□□□ -1.12
CSPG4P3Y-201ENST00000418188 JMJD7-PLA2G4BH0Y9G9 81 aa8.02□□□□□ -1.13
CSPG4P3Y-201ENST00000418188 A0A1B0GX51 115 aa8.02□□□□□ -1.13
CSPG4P3Y-201ENST00000418188 KIAA0087Q14695 138 aa8.02□□□□□ -1.13
CSPG4P3Y-201ENST00000418188 C6orf99Q4VX62 202 aa8.02□□□□□ -1.13
CSPG4P3Y-201ENST00000418188 SPATA3Q8NHX4 192 aa8.02□□□□□ -1.13
CSPG4P3Y-201ENST00000418188 ATRQ13535 2644 aa8.01□□□□□ -1.13
CSPG4P3Y-201ENST00000418188 Q8N814 137 aa8.01□□□□□ -1.13
CSPG4P3Y-201ENST00000418188 LINC00526Q96FQ7 95 aa8.01□□□□□ -1.13
CSPG4P3Y-201ENST00000418188 IGKV3D-7A0A0C4DH55 119 aa8.01□□□□□ -1.13
CSPG4P3Y-201ENST00000418188 UNQ6190/PRO20217Q6UXQ8 127 aa8.01□□□□□ -1.13
CSPG4P3Y-201ENST00000418188 C9orf129Q5T035 196 aaKnown RBP8□□□□□ -1.13
CSPG4P3Y-201ENST00000418188 Q8NAQ8 132 aa8□□□□□ -1.13
CSPG4P3Y-201ENST00000418188 IGHV4-30-4P0DP06 118 aa8□□□□□ -1.13
CSPG4P3Y-201ENST00000418188 C9orf153Q5TBE3 101 aa8□□□□□ -1.13
CSPG4P3Y-201ENST00000418188 CYSRT1A8MQ03 144 aa7.99□□□□□ -1.13
CSPG4P3Y-201ENST00000418188 C6orf223Q8N319 242 aa7.99□□□□□ -1.13
CSPG4P3Y-201ENST00000418188 LINC00846Q9NV44 126 aa7.99□□□□□ -1.13
CSPG4P3Y-201ENST00000418188 ANK3Q12955 4377 aaKnown RBP7.99□□□□□ -1.13
CSPG4P3Y-201ENST00000418188 RPL18AQ02543 176 aaKnown RBP7.98□□□□□ -1.13
CSPG4P3Y-201ENST00000418188 LAMTOR3Q9UHA4 124 aa7.98□□□□□ -1.13
CSPG4P3Y-201ENST00000418188 MUC7Q8TAX7 377 aa7.98□□□□□ -1.13
CSPG4P3Y-201ENST00000418188 VWFP04275 2813 aa7.98□□□□□ -1.13
CSPG4P3Y-201ENST00000418188 ZNF561-AS1K7EIQ3 104 aa7.98□□□□□ -1.13
CSPG4P3Y-201ENST00000418188 HIST1H4AP62805 103 aaKnown RBP7.98□□□□□ -1.13
CSPG4P3Y-201ENST00000418188 C3orf56Q8N813 242 aa7.98□□□□□ -1.13
CSPG4P3Y-201ENST00000418188 ATOX1O00244 68 aa7.97□□□□□ -1.13
CSPG4P3Y-201ENST00000418188 C10orf25Q5T742 122 aa7.97□□□□□ -1.13
CSPG4P3Y-201ENST00000418188 CCKP06307 115 aa7.96□□□□□ -1.13
CSPG4P3Y-201ENST00000418188 OBSCN-AS1Q96MR7 158 aa7.96□□□□□ -1.13
CSPG4P3Y-201ENST00000418188 hADV29S1A0JD25 119 aa7.96□□□□□ -1.14
CSPG4P3Y-201ENST00000418188 UQCRQO14949 82 aa7.96□□□□□ -1.14
CSPG4P3Y-201ENST00000418188 NANOS2P60321 138 aaKnown RBP7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms