RNA–Protein interactions for RNA: ENST00000416995.1

LINC02558-201, Transcript of long intergenic non-protein coding RNA 2558, humanhuman

TSL 5

Gene LINC02558, Length 178 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02558-201ENST00000416995 LINC01546A6NGU7 62 aa9.14□□□□□ -0.95
LINC02558-201ENST00000416995 C9orf129Q5T035 196 aaKnown RBP9.14□□□□□ -0.95
LINC02558-201ENST00000416995 NDUFC2-KCTD14E9PQ53 114 aa9.13□□□□□ -0.95
LINC02558-201ENST00000416995 NPSP0C0P6 89 aa9.13□□□□□ -0.95
LINC02558-201ENST00000416995 G0S2P27469 103 aa9.13□□□□□ -0.95
LINC02558-201ENST00000416995 UBE2BP63146 152 aa9.13□□□□□ -0.95
LINC02558-201ENST00000416995 CBLN2Q8IUK8 224 aa9.13□□□□□ -0.95
LINC02558-201ENST00000416995 TMEM141Q96I45 108 aa9.13□□□□□ -0.95
LINC02558-201ENST00000416995 MUC2Q02817 5179 aa9.13□□□□□ -0.95
LINC02558-201ENST00000416995 UBE2D1P51668 147 aa9.12□□□□□ -0.95
LINC02558-201ENST00000416995 C2orf66Q6UXQ4 117 aa9.12□□□□□ -0.95
LINC02558-201ENST00000416995 CYSLTR1Q9Y271 337 aa9.12□□□□□ -0.95
LINC02558-201ENST00000416995 ZC2HC1BQ5TFG8 222 aa9.11□□□□□ -0.95
LINC02558-201ENST00000416995 LINC01549A6NIU2 74 aa9.1□□□□□ -0.95
LINC02558-201ENST00000416995 TEX43Q6ZNM6 134 aa9.1□□□□□ -0.95
LINC02558-201ENST00000416995 LINC01561Q8N1V8 128 aa9.1□□□□□ -0.95
LINC02558-201ENST00000416995 PACRGQ96M98 296 aaPredicted RBP9.1□□□□□ -0.95
LINC02558-201ENST00000416995 LINC00173Q6ZV60 143 aa9.09□□□□□ -0.95
LINC02558-201ENST00000416995 C18orf32Q8TCD1 76 aa9.09□□□□□ -0.95
LINC02558-201ENST00000416995 IGIPA6NJ69 53 aa9.08□□□□□ -0.96
LINC02558-201ENST00000416995 FA2HQ7L5A8 372 aa9.08□□□□□ -0.96
LINC02558-201ENST00000416995 TOMM6Q96B49 74 aa9.08□□□□□ -0.96
LINC02558-201ENST00000416995 AMELXQ99217 191 aa9.08□□□□□ -0.96
LINC02558-201ENST00000416995 TIMM17AQ99595 171 aa9.08□□□□□ -0.96
LINC02558-201ENST00000416995 RPL13AP40429 203 aaKnown RBP9.07□□□□□ -0.96
LINC02558-201ENST00000416995 PRR4Q16378 134 aa9.07□□□□□ -0.96
LINC02558-201ENST00000416995 LINC00469Q8N7U9 141 aa9.07□□□□□ -0.96
LINC02558-201ENST00000416995 C2orf88Q9BSF0 95 aa9.07□□□□□ -0.96
LINC02558-201ENST00000416995 ZNF861PO60384 105 aa9.06□□□□□ -0.96
LINC02558-201ENST00000416995 PAPPA-AS1Q5QFB9 102 aa9.06□□□□□ -0.96
LINC02558-201ENST00000416995 Q6ZN92 141 aa9.06□□□□□ -0.96
LINC02558-201ENST00000416995 TOMM7Q9P0U1 55 aa9.06□□□□□ -0.96
LINC02558-201ENST00000416995 COLCA2A8K830 154 aa9.05□□□□□ -0.96
LINC02558-201ENST00000416995 PRSS2P07478 247 aa9.05□□□□□ -0.96
LINC02558-201ENST00000416995 LINC00614P0C842 121 aa9.05□□□□□ -0.96
LINC02558-201ENST00000416995 RAB5BP61020 215 aa9.05□□□□□ -0.96
LINC02558-201ENST00000416995 ERASQ7Z444 233 aa9.05□□□□□ -0.96
LINC02558-201ENST00000416995 URB1-AS1Q96HZ7 61 aa9.05□□□□□ -0.96
LINC02558-201ENST00000416995 VCX2Q9H322 139 aa9.05□□□□□ -0.96
LINC02558-201ENST00000416995 C22orf24Q9Y442 160 aa9.05□□□□□ -0.96
LINC02558-201ENST00000416995 CKS1BP61024 79 aa9.04□□□□□ -0.96
LINC02558-201ENST00000416995 Q8IZM0 81 aa9.04□□□□□ -0.96
LINC02558-201ENST00000416995 XAGE1AQ9HD64 81 aa9.04□□□□□ -0.96
LINC02558-201ENST00000416995 C6orf226Q5I0X4 101 aa9.03□□□□□ -0.96
LINC02558-201ENST00000416995 FAM19A3Q7Z5A8 133 aa9.03□□□□□ -0.96
LINC02558-201ENST00000416995 NUPR1O60356 82 aa9.02□□□□□ -0.97
LINC02558-201ENST00000416995 SCGB3A1Q96QR1 104 aa9.02□□□□□ -0.97
LINC02558-201ENST00000416995 A0A096LNJ9 63 aa9.01□□□□□ -0.97
LINC02558-201ENST00000416995 TRGC2P03986 189 aa9.01□□□□□ -0.97
LINC02558-201ENST00000416995 LBHQ53QV2 105 aaPredicted RBP9.01□□□□□ -0.97
LINC02558-201ENST00000416995 CHCHD1Q96BP2 118 aaKnown RBP9.01□□□□□ -0.97
LINC02558-201ENST00000416995 CDKN2A-AS1Q9UH64 79 aa9.01□□□□□ -0.97
LINC02558-201ENST00000416995 F8VRH5 84 aa9□□□□□ -0.97
LINC02558-201ENST00000416995 HBDP02042 147 aa9□□□□□ -0.97
LINC02558-201ENST00000416995 TSPAN13O95857 204 aa8.99□□□□□ -0.97
LINC02558-201ENST00000416995 HERVK_113P63121 156 aa8.99□□□□□ -0.97
LINC02558-201ENST00000416995 SEC11AP67812 179 aa8.99□□□□□ -0.97
LINC02558-201ENST00000416995 A0A087X002 238 aa8.98□□□□□ -0.97
LINC02558-201ENST00000416995 SCO1O75880 301 aa8.98□□□□□ -0.97
LINC02558-201ENST00000416995 PDZD11Q5EBL8 140 aa8.98□□□□□ -0.97
LINC02558-201ENST00000416995 MRPL55Q7Z7F7 128 aaKnown RBP8.98□□□□□ -0.97
LINC02558-201ENST00000416995 TP73-AS1Q9UF72 201 aa8.98□□□□□ -0.97
LINC02558-201ENST00000416995 BCE1O60756 84 aa8.97□□□□□ -0.97
LINC02558-201ENST00000416995 PMVKQ15126 192 aa8.97□□□□□ -0.97
LINC02558-201ENST00000416995 GEMIN7Q9H840 131 aaKnown RBP8.97□□□□□ -0.97
LINC02558-201ENST00000416995 ATP5LO75964 103 aa8.96□□□□□ -0.98
LINC02558-201ENST00000416995 RPL28P46779 137 aaKnown RBP8.96□□□□□ -0.98
LINC02558-201ENST00000416995 CST9LQ9H4G1 147 aa8.96□□□□□ -0.98
LINC02558-201ENST00000416995 RPL37AP8A6NKH3 93 aa8.95□□□□□ -0.98
LINC02558-201ENST00000416995 CXCL5P42830 114 aa8.95□□□□□ -0.98
LINC02558-201ENST00000416995 BAGE3Q86Y29 109 aa8.95□□□□□ -0.98
LINC02558-201ENST00000416995 LINC00167Q96N53 147 aa8.95□□□□□ -0.98
LINC02558-201ENST00000416995 SMIM1B2RUZ4 78 aa8.94□□□□□ -0.98
LINC02558-201ENST00000416995 HSBP1O75506 76 aa8.94□□□□□ -0.98
LINC02558-201ENST00000416995 PMCHL1Q16048 86 aa8.94□□□□□ -0.98
LINC02558-201ENST00000416995 FAT4Q6V0I7 4981 aa8.94□□□□□ -0.98
LINC02558-201ENST00000416995 IGLV5-45A0A087WSX0 123 aa8.93□□□□□ -0.98
LINC02558-201ENST00000416995 TINCRA0A1B0GVN0 87 aa8.93□□□□□ -0.98
LINC02558-201ENST00000416995 CRYGAP11844 174 aa8.93□□□□□ -0.98
LINC02558-201ENST00000416995 LINC00310P59036 64 aa8.93□□□□□ -0.98
LINC02558-201ENST00000416995 TYMSOSQ8TAI1 123 aa8.93□□□□□ -0.98
LINC02558-201ENST00000416995 GAGE10A6NGK3 116 aa8.92□□□□□ -0.98
LINC02558-201ENST00000416995 COX7B2Q8TF08 81 aa8.92□□□□□ -0.98
LINC02558-201ENST00000416995 ANAPC11Q9NYG5 84 aa8.92□□□□□ -0.98
LINC02558-201ENST00000416995 SERF1AO75920 110 aa8.91□□□□□ -0.98
LINC02558-201ENST00000416995 IGLC3P0DOY3 106 aa8.91□□□□□ -0.98
LINC02558-201ENST00000416995 KRTAP13-1Q8IUC0 172 aa8.91□□□□□ -0.98
LINC02558-201ENST00000416995 IGLV5-37A0A075B6J1 123 aa8.9□□□□□ -0.98
LINC02558-201ENST00000416995 KRTAP13-2Q52LG2 175 aa8.9□□□□□ -0.98
LINC02558-201ENST00000416995 A0A0U1RQV1 116 aa8.89□□□□□ -0.99
LINC02558-201ENST00000416995 HIST1H2BKO60814 126 aa8.89□□□□□ -0.99
LINC02558-201ENST00000416995 HIST1H2BJP06899 126 aa8.89□□□□□ -0.99
LINC02558-201ENST00000416995 HIST1H2BOP23527 126 aa8.89□□□□□ -0.99
LINC02558-201ENST00000416995 HIST1H2BBP33778 126 aa8.89□□□□□ -0.99
LINC02558-201ENST00000416995 HIST1H2BDP58876 126 aa8.89□□□□□ -0.99
LINC02558-201ENST00000416995 HIST1H2BCP62807 126 aa8.89□□□□□ -0.99
LINC02558-201ENST00000416995 HIST2H2BEQ16778 126 aa8.89□□□□□ -0.99
LINC02558-201ENST00000416995 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.89□□□□□ -0.99
LINC02558-201ENST00000416995 HIST1H2BHQ93079 126 aa8.89□□□□□ -0.99
LINC02558-201ENST00000416995 IFI27L1Q96BM0 104 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms