RNA–Protein interactions for RNA: ENST00000416728.3

PAF1-202, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene PAF1, Length 1,383 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-202ENST00000416728 ZC2HC1BQ5TFG8 222 aa8.67□□□□□ -1.02
PAF1-202ENST00000416728 UQCC3Q6UW78 93 aa8.67□□□□□ -1.02
PAF1-202ENST00000416728 LINC00173Q6ZV60 143 aa8.67□□□□□ -1.02
PAF1-202ENST00000416728 Q8N8P6 123 aa8.67□□□□□ -1.02
PAF1-202ENST00000416728 LINC00587B1AMM8 73 aa8.66□□□□□ -1.02
PAF1-202ENST00000416728 ORMDL2Q53FV1 153 aa8.66□□□□□ -1.02
PAF1-202ENST00000416728 C6orf226Q5I0X4 101 aa8.66□□□□□ -1.02
PAF1-202ENST00000416728 AMELXQ99217 191 aa8.66□□□□□ -1.02
PAF1-202ENST00000416728 LPAP08519 4548 aa8.66□□□□□ -1.02
PAF1-202ENST00000416728 NPSP0C0P6 89 aa8.65□□□□□ -1.02
PAF1-202ENST00000416728 Q8IZM0 81 aa8.65□□□□□ -1.02
PAF1-202ENST00000416728 K7EMI3 77 aa8.64□□□□□ -1.03
PAF1-202ENST00000416728 PNRC1Q12796 327 aaPredicted RBP8.64□□□□□ -1.03
PAF1-202ENST00000416728 ALKBH7Q9BT30 221 aaPredicted RBP8.64□□□□□ -1.03
PAF1-202ENST00000416728 IGIPA6NJ69 53 aa8.63□□□□□ -1.03
PAF1-202ENST00000416728 ZNF861PO60384 105 aa8.63□□□□□ -1.03
PAF1-202ENST00000416728 APOC3P02656 99 aa8.63□□□□□ -1.03
PAF1-202ENST00000416728 MT-ND4LP03901 98 aa8.63□□□□□ -1.03
PAF1-202ENST00000416728 ANAPC16Q96DE5 110 aa8.63□□□□□ -1.03
PAF1-202ENST00000416728 XAGE1AQ9HD64 81 aa8.63□□□□□ -1.03
PAF1-202ENST00000416728 CARHSP1Q9Y2V2 147 aaKnown RBP8.63□□□□□ -1.03
PAF1-202ENST00000416728 C22orf24Q9Y442 160 aa8.63□□□□□ -1.03
PAF1-202ENST00000416728 NUPR1O60356 82 aa8.62□□□□□ -1.03
PAF1-202ENST00000416728 HERVK_113P63121 156 aa8.62□□□□□ -1.03
PAF1-202ENST00000416728 SEC11AP67812 179 aa8.62□□□□□ -1.03
PAF1-202ENST00000416728 PRR4Q16378 134 aa8.62□□□□□ -1.03
PAF1-202ENST00000416728 LBHQ53QV2 105 aaPredicted RBP8.62□□□□□ -1.03
PAF1-202ENST00000416728 PAPPA-AS1Q5QFB9 102 aa8.62□□□□□ -1.03
PAF1-202ENST00000416728 FAM19A3Q7Z5A8 133 aa8.62□□□□□ -1.03
PAF1-202ENST00000416728 SVBPQ8N300 66 aa8.62□□□□□ -1.03
PAF1-202ENST00000416728 NXT2Q9NPJ8 142 aaKnown RBP8.62□□□□□ -1.03
PAF1-202ENST00000416728 LCE2DQ5TA82 110 aaPredicted RBP8.61□□□□□ -1.03
PAF1-202ENST00000416728 GEMIN7Q9H840 131 aaKnown RBP8.61□□□□□ -1.03
PAF1-202ENST00000416728 CDKN2A-AS1Q9UH64 79 aa8.61□□□□□ -1.03
PAF1-202ENST00000416728 F8VRH5 84 aa8.61□□□□□ -1.03
PAF1-202ENST00000416728 G0S2P27469 103 aa8.61□□□□□ -1.03
PAF1-202ENST00000416728 RAB5BP61020 215 aa8.61□□□□□ -1.03
PAF1-202ENST00000416728 CTDSP1Q9GZU7 261 aa8.61□□□□□ -1.03
PAF1-202ENST00000416728 C10orf91Q5T1B1 145 aa8.6□□□□□ -1.03
PAF1-202ENST00000416728 TIMM17AQ99595 171 aa8.6□□□□□ -1.03
PAF1-202ENST00000416728 CXCL5P42830 114 aa8.59□□□□□ -1.03
PAF1-202ENST00000416728 MRPL55Q7Z7F7 128 aaKnown RBP8.59□□□□□ -1.03
PAF1-202ENST00000416728 TP73-AS1Q9UF72 201 aa8.59□□□□□ -1.03
PAF1-202ENST00000416728 RPL28P46779 137 aaKnown RBP8.58□□□□□ -1.04
PAF1-202ENST00000416728 TOMM6Q96B49 74 aa8.58□□□□□ -1.04
PAF1-202ENST00000416728 BCE1O60756 84 aa8.56□□□□□ -1.04
PAF1-202ENST00000416728 ERASQ7Z444 233 aa8.56□□□□□ -1.04
PAF1-202ENST00000416728 TMEM218A2RU14 115 aa8.55□□□□□ -1.04
PAF1-202ENST00000416728 C5orf52A6NGY3 159 aa8.55□□□□□ -1.04
PAF1-202ENST00000416728 SMIM1B2RUZ4 78 aa8.55□□□□□ -1.04
PAF1-202ENST00000416728 TSPAN13O95857 204 aa8.55□□□□□ -1.04
PAF1-202ENST00000416728 SCGB3A1Q96QR1 104 aa8.55□□□□□ -1.04
PAF1-202ENST00000416728 KIAA1644Q3SXP7 199 aa8.54□□□□□ -1.04
PAF1-202ENST00000416728 PDZD11Q5EBL8 140 aa8.54□□□□□ -1.04
PAF1-202ENST00000416728 A0A087X002 238 aa8.53□□□□□ -1.04
PAF1-202ENST00000416728 TINCRA0A1B0GVN0 87 aa8.53□□□□□ -1.04
PAF1-202ENST00000416728 RPL37AP8A6NKH3 93 aa8.53□□□□□ -1.04
PAF1-202ENST00000416728 CRYGAP11844 174 aa8.53□□□□□ -1.04
PAF1-202ENST00000416728 COX7B2Q8TF08 81 aa8.53□□□□□ -1.04
PAF1-202ENST00000416728 LINC00167Q96N53 147 aa8.53□□□□□ -1.04
PAF1-202ENST00000416728 SEC11CQ9BY50 192 aa8.53□□□□□ -1.04
PAF1-202ENST00000416728 GAGE10A6NGK3 116 aa8.52□□□□□ -1.05
PAF1-202ENST00000416728 ADCYAP1P18509 176 aa8.52□□□□□ -1.05
PAF1-202ENST00000416728 TYMSOSQ8TAI1 123 aa8.52□□□□□ -1.05
PAF1-202ENST00000416728 IGLV5-45A0A087WSX0 123 aa8.51□□□□□ -1.05
PAF1-202ENST00000416728 LINC01549A6NIU2 74 aa8.51□□□□□ -1.05
PAF1-202ENST00000416728 NKAPP1Q8N9T2 125 aa8.5□□□□□ -1.05
PAF1-202ENST00000416728 SPINK8P0C7L1 97 aa8.49□□□□□ -1.05
PAF1-202ENST00000416728 CST9LQ9H4G1 147 aa8.49□□□□□ -1.05
PAF1-202ENST00000416728 SMCO4Q9NRQ5 59 aa8.49□□□□□ -1.05
PAF1-202ENST00000416728 IGLV5-37A0A075B6J1 123 aa8.48□□□□□ -1.05
PAF1-202ENST00000416728 TRAV9-1A0A075B6T8 112 aa8.48□□□□□ -1.05
PAF1-202ENST00000416728 A0A0U1RQV1 116 aa8.48□□□□□ -1.05
PAF1-202ENST00000416728 UBE2AP49459 152 aa8.48□□□□□ -1.05
PAF1-202ENST00000416728 SNRPEP62304 92 aaKnown RBP8.48□□□□□ -1.05
PAF1-202ENST00000416728 ANKRD39Q53RE8 183 aa8.48□□□□□ -1.05
PAF1-202ENST00000416728 CBLN2Q8IUK8 224 aa8.48□□□□□ -1.05
PAF1-202ENST00000416728 MUC2Q02817 5179 aa8.48□□□□□ -1.05
PAF1-202ENST00000416728 COLCA2A8K830 154 aa8.48□□□□□ -1.05
PAF1-202ENST00000416728 PMVKQ15126 192 aa8.48□□□□□ -1.05
PAF1-202ENST00000416728 MRPL18Q9H0U6 180 aaKnown RBP8.48□□□□□ -1.05
PAF1-202ENST00000416728 ANAPC11Q9NYG5 84 aa8.48□□□□□ -1.05
PAF1-202ENST00000416728 LINC01546A6NGU7 62 aa8.47□□□□□ -1.05
PAF1-202ENST00000416728 H3BRM9 83 aa8.47□□□□□ -1.05
PAF1-202ENST00000416728 ATP5LO75964 103 aa8.47□□□□□ -1.05
PAF1-202ENST00000416728 GNB1LQ9BYB4 327 aa8.47□□□□□ -1.05
PAF1-202ENST00000416728 KRTAP13-1Q8IUC0 172 aa8.46□□□□□ -1.06
PAF1-202ENST00000416728 CBY1Q9Y3M2 126 aa8.46□□□□□ -1.06
PAF1-202ENST00000416728 IGKV2-28A0A075B6P5 120 aa8.45□□□□□ -1.06
PAF1-202ENST00000416728 IGKV2D-28P01615 120 aa8.45□□□□□ -1.06
PAF1-202ENST00000416728 FA2HQ7L5A8 372 aa8.45□□□□□ -1.06
PAF1-202ENST00000416728 PFN2P35080 140 aa8.44□□□□□ -1.06
PAF1-202ENST00000416728 FABP9Q0Z7S8 132 aa8.44□□□□□ -1.06
PAF1-202ENST00000416728 FAM229BQ4G0N7 80 aa8.44□□□□□ -1.06
PAF1-202ENST00000416728 KRTAP13-2Q52LG2 175 aa8.44□□□□□ -1.06
PAF1-202ENST00000416728 COX19Q49B96 90 aa8.42□□□□□ -1.06
PAF1-202ENST00000416728 LINC00304Q8N9R0 145 aa8.42□□□□□ -1.06
PAF1-202ENST00000416728 C14orf144Q96I85 54 aa8.42□□□□□ -1.06
PAF1-202ENST00000416728 IGKV2D-26A0A0A0MRZ7 120 aa8.41□□□□□ -1.06
PAF1-202ENST00000416728 IGLV5-39A0A0G2JS06 123 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms