RNA–Protein interactions for RNA: ENST00000415409.5

HDAC8-211, Transcript of histone deacetylase 8, humanhuman

TSL 5

Gene HDAC8, Length 913 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-211ENST00000415409 REG3AQ06141 175 aa4.54□□□□□ -1.68
HDAC8-211ENST00000415409 ZFAND6Q6FIF0 208 aa4.54□□□□□ -1.68
HDAC8-211ENST00000415409 TM2D2Q9BX73 214 aa4.54□□□□□ -1.68
HDAC8-211ENST00000415409 SPANXB1Q9NS25 103 aaPredicted RBP4.54□□□□□ -1.68
HDAC8-211ENST00000415409 IGHV3OR16-9A0A0B4J2B5 98 aa4.53□□□□□ -1.68
HDAC8-211ENST00000415409 A0A0J9YXY3 114 aa4.53□□□□□ -1.68
HDAC8-211ENST00000415409 COX7A2LO14548 114 aa4.53□□□□□ -1.68
HDAC8-211ENST00000415409 CRPP02741 224 aa4.53□□□□□ -1.68
HDAC8-211ENST00000415409 CIRBPQ14011 172 aaKnown RBP4.53□□□□□ -1.68
HDAC8-211ENST00000415409 ESRGQ1W209 222 aa4.53□□□□□ -1.68
HDAC8-211ENST00000415409 OCIAD2Q56VL3 154 aa4.53□□□□□ -1.68
HDAC8-211ENST00000415409 CLPSL2Q6UWE3 100 aa4.53□□□□□ -1.68
HDAC8-211ENST00000415409 CD164L2Q6UWJ8 174 aa4.53□□□□□ -1.68
HDAC8-211ENST00000415409 C5orf38Q86SI9 138 aa4.53□□□□□ -1.68
HDAC8-211ENST00000415409 LINC01561Q8N1V8 128 aa4.53□□□□□ -1.68
HDAC8-211ENST00000415409 COX7B2Q8TF08 81 aa4.53□□□□□ -1.68
HDAC8-211ENST00000415409 NACAE9PAV3 2078 aa4.52□□□□□ -1.69
HDAC8-211ENST00000415409 IGLL5B9A064 214 aa4.52□□□□□ -1.69
HDAC8-211ENST00000415409 TIMM17BO60830 172 aa4.52□□□□□ -1.69
HDAC8-211ENST00000415409 IGHV3-30P01768 117 aa4.52□□□□□ -1.69
HDAC8-211ENST00000415409 IGHV3-33P01772 117 aa4.52□□□□□ -1.69
HDAC8-211ENST00000415409 PRSS2P07478 247 aa4.52□□□□□ -1.69
HDAC8-211ENST00000415409 SMIM13P0DJ93 91 aa4.52□□□□□ -1.69
HDAC8-211ENST00000415409 IGHV3-30-5P0DP03 117 aa4.52□□□□□ -1.69
HDAC8-211ENST00000415409 MALP21145 153 aa4.52□□□□□ -1.69
HDAC8-211ENST00000415409 CCL18P55774 89 aa4.52□□□□□ -1.69
HDAC8-211ENST00000415409 C6orf226Q5I0X4 101 aa4.52□□□□□ -1.69
HDAC8-211ENST00000415409 SFTA2Q6UW10 78 aa4.52□□□□□ -1.69
HDAC8-211ENST00000415409 Q6ZVH6 145 aa4.52□□□□□ -1.69
HDAC8-211ENST00000415409 WFDC10BQ8IUB3 73 aa4.52□□□□□ -1.69
HDAC8-211ENST00000415409 C10orf126Q8N4M7 172 aa4.52□□□□□ -1.69
HDAC8-211ENST00000415409 CHCHD10Q8WYQ3 142 aaPredicted RBP4.52□□□□□ -1.69
HDAC8-211ENST00000415409 TOMM7Q9P0U1 55 aa4.52□□□□□ -1.69
HDAC8-211ENST00000415409 KLK12Q9UKR0 248 aa4.52□□□□□ -1.69
HDAC8-211ENST00000415409 TRAV8-4A0A0B4J246 113 aa4.51□□□□□ -1.69
HDAC8-211ENST00000415409 SLPIP03973 132 aa4.51□□□□□ -1.69
HDAC8-211ENST00000415409 FXYD2P54710 66 aa4.51□□□□□ -1.69
HDAC8-211ENST00000415409 CKS1BP61024 79 aa4.51□□□□□ -1.69
HDAC8-211ENST00000415409 UBE2V1Q13404 147 aa4.51□□□□□ -1.69
HDAC8-211ENST00000415409 LINC01556Q5JQF7 62 aa4.51□□□□□ -1.69
HDAC8-211ENST00000415409 MEIG1Q5JSS6 88 aa4.51□□□□□ -1.69
HDAC8-211ENST00000415409 Q8N1X5 172 aa4.51□□□□□ -1.69
HDAC8-211ENST00000415409 COPS9Q8WXC6 57 aa4.51□□□□□ -1.69
HDAC8-211ENST00000415409 Q9H8V8 135 aa4.51□□□□□ -1.69
HDAC8-211ENST00000415409 PRR34Q9NV39 138 aa4.51□□□□□ -1.69
HDAC8-211ENST00000415409 COX11Q9Y6N1 276 aa4.51□□□□□ -1.69
HDAC8-211ENST00000415409 IGLV10-54A0A075B6I4 117 aa4.5□□□□□ -1.69
HDAC8-211ENST00000415409 A0A0U1RRA0 63 aa4.5□□□□□ -1.69
HDAC8-211ENST00000415409 GAGE12HA6NDE8 117 aa4.5□□□□□ -1.69
HDAC8-211ENST00000415409 TAX1BP3O14907 124 aa4.5□□□□□ -1.69
HDAC8-211ENST00000415409 APOMO95445 188 aa4.5□□□□□ -1.69
HDAC8-211ENST00000415409 IFITM1P13164 125 aa4.5□□□□□ -1.69
HDAC8-211ENST00000415409 RPL24P83731 157 aaKnown RBP4.5□□□□□ -1.69
HDAC8-211ENST00000415409 MIAQ16674 131 aa4.5□□□□□ -1.69
HDAC8-211ENST00000415409 ENHOQ6UWT2 76 aa4.5□□□□□ -1.69
HDAC8-211ENST00000415409 UBE2WQ96B02 151 aa4.5□□□□□ -1.69
HDAC8-211ENST00000415409 ZNF625Q96I27 306 aaPredicted RBP4.5□□□□□ -1.69
HDAC8-211ENST00000415409 SPANXDQ9BXN6 97 aa4.5□□□□□ -1.69
HDAC8-211ENST00000415409 NHP2Q9NX24 153 aaKnown RBP4.5□□□□□ -1.69
HDAC8-211ENST00000415409 SPANXCQ9NY87 97 aa4.5□□□□□ -1.69
HDAC8-211ENST00000415409 PRKDCP78527 4128 aaKnown RBP4.5□□□□□ -1.69
HDAC8-211ENST00000415409 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.49□□□□□ -1.69
HDAC8-211ENST00000415409 DNAH10OSP0CZ25 163 aa4.49□□□□□ -1.69
HDAC8-211ENST00000415409 FOXI1Q12951 378 aa4.49□□□□□ -1.69
HDAC8-211ENST00000415409 MUSTN1Q8IVN3 82 aa4.49□□□□□ -1.69
HDAC8-211ENST00000415409 Q8IZM0 81 aa4.49□□□□□ -1.69
HDAC8-211ENST00000415409 LITAFQ99732 161 aa4.49□□□□□ -1.69
HDAC8-211ENST00000415409 A0A1B0GWB2 263 aa4.48□□□□□ -1.69
HDAC8-211ENST00000415409 K7ERJ3 54 aa4.48□□□□□ -1.69
HDAC8-211ENST00000415409 CXCL5P42830 114 aa4.48□□□□□ -1.69
HDAC8-211ENST00000415409 ADAMTSL4-AS1Q5T5F5 129 aa4.48□□□□□ -1.69
HDAC8-211ENST00000415409 RAB37Q96AX2 223 aa4.48□□□□□ -1.69
HDAC8-211ENST00000415409 KLK5Q9Y337 293 aaPredicted RBP4.48□□□□□ -1.69
HDAC8-211ENST00000415409 LINC00588Q9Y4M8 146 aa4.48□□□□□ -1.69
HDAC8-211ENST00000415409 HUWE1Q7Z6Z7 4374 aaKnown RBP4.48□□□□□ -1.69
HDAC8-211ENST00000415409 NUPR2A6NF83 97 aa4.47□□□□□ -1.69
HDAC8-211ENST00000415409 IBA57-AS1B1ANH7 110 aa4.47□□□□□ -1.69
HDAC8-211ENST00000415409 LINC00158P58513 81 aa4.47□□□□□ -1.69
HDAC8-211ENST00000415409 SMIM20Q8N5G0 67 aa4.47□□□□□ -1.69
HDAC8-211ENST00000415409 RMI2Q96E14 147 aa4.47□□□□□ -1.69
HDAC8-211ENST00000415409 UPK3BQ9BT76 320 aa4.47□□□□□ -1.69
HDAC8-211ENST00000415409 IGKV2D-24A0A075B6R9 120 aa4.46□□□□□ -1.7
HDAC8-211ENST00000415409 H3BUT2 72 aa4.46□□□□□ -1.7
HDAC8-211ENST00000415409 SPAG11BQ08648 103 aa4.46□□□□□ -1.7
HDAC8-211ENST00000415409 UBE2DNLQ8IWF7 75 aa4.46□□□□□ -1.7
HDAC8-211ENST00000415409 A0A0B4J2C4 111 aa4.45□□□□□ -1.7
HDAC8-211ENST00000415409 A0A1W2PPM0 123 aa4.45□□□□□ -1.7
HDAC8-211ENST00000415409 CFC1BP0CG36 223 aa4.45□□□□□ -1.7
HDAC8-211ENST00000415409 CFC1P0CG37 223 aa4.45□□□□□ -1.7
HDAC8-211ENST00000415409 FABP2P12104 132 aa4.45□□□□□ -1.7
HDAC8-211ENST00000415409 PFN2P35080 140 aa4.45□□□□□ -1.7
HDAC8-211ENST00000415409 NPC2P61916 151 aa4.45□□□□□ -1.7
HDAC8-211ENST00000415409 KIAA0087Q14695 138 aa4.45□□□□□ -1.7
HDAC8-211ENST00000415409 DAND5Q8N907 189 aa4.45□□□□□ -1.7
HDAC8-211ENST00000415409 LINC00308Q8TCZ7 52 aa4.45□□□□□ -1.7
HDAC8-211ENST00000415409 PPDPFQ9H3Y8 114 aa4.45□□□□□ -1.7
HDAC8-211ENST00000415409 SS18L2Q9UHA2 77 aa4.45□□□□□ -1.7
HDAC8-211ENST00000415409 PRO1854Q9UHT4 67 aa4.45□□□□□ -1.7
HDAC8-211ENST00000415409 ERG28Q9UKR5 140 aa4.45□□□□□ -1.7
HDAC8-211ENST00000415409 APLNQ9ULZ1 77 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms