RNA–Protein interactions for RNA: ENST00000414620.1

ACTB-202, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 561 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-202ENST00000414620 TIMM17AQ99595 171 aa9.39□□□□□ -0.91
ACTB-202ENST00000414620 XAGE1AQ9HD64 81 aa9.39□□□□□ -0.91
ACTB-202ENST00000414620 PAPPA-AS1Q5QFB9 102 aa9.38□□□□□ -0.91
ACTB-202ENST00000414620 SEC11AP67812 179 aa9.37□□□□□ -0.91
ACTB-202ENST00000414620 SCGB3A1Q96QR1 104 aa9.37□□□□□ -0.91
ACTB-202ENST00000414620 TMEM218A2RU14 115 aa9.36□□□□□ -0.91
ACTB-202ENST00000414620 KRTAP1-4P0C5Y4 121 aa9.36□□□□□ -0.91
ACTB-202ENST00000414620 G0S2P27469 103 aa9.36□□□□□ -0.91
ACTB-202ENST00000414620 C22orf24Q9Y442 160 aa9.36□□□□□ -0.91
ACTB-202ENST00000414620 F8VRH5 84 aa9.35□□□□□ -0.91
ACTB-202ENST00000414620 ERASQ7Z444 233 aa9.35□□□□□ -0.91
ACTB-202ENST00000414620 TRAV9-1A0A075B6T8 112 aa9.34□□□□□ -0.91
ACTB-202ENST00000414620 SMIM1B2RUZ4 78 aa9.34□□□□□ -0.91
ACTB-202ENST00000414620 UQCC3Q6UW78 93 aa9.34□□□□□ -0.91
ACTB-202ENST00000414620 IGLV1-50A0A075B6I6 118 aa9.33□□□□□ -0.92
ACTB-202ENST00000414620 S100PP25815 95 aa9.33□□□□□ -0.92
ACTB-202ENST00000414620 IFITM2Q01629 132 aa9.33□□□□□ -0.92
ACTB-202ENST00000414620 SPINK8P0C7L1 97 aa9.32□□□□□ -0.92
ACTB-202ENST00000414620 CXCL5P42830 114 aa9.32□□□□□ -0.92
ACTB-202ENST00000414620 COX7B2Q8TF08 81 aa9.32□□□□□ -0.92
ACTB-202ENST00000414620 TINCRA0A1B0GVN0 87 aa9.31□□□□□ -0.92
ACTB-202ENST00000414620 NUPR1O60356 82 aa9.31□□□□□ -0.92
ACTB-202ENST00000414620 LBHQ53QV2 105 aaPredicted RBP9.31□□□□□ -0.92
ACTB-202ENST00000414620 PDZD11Q5EBL8 140 aa9.31□□□□□ -0.92
ACTB-202ENST00000414620 GNB1LQ9BYB4 327 aa9.31□□□□□ -0.92
ACTB-202ENST00000414620 ZNF861PO60384 105 aa9.3□□□□□ -0.92
ACTB-202ENST00000414620 FA2HQ7L5A8 372 aa9.3□□□□□ -0.92
ACTB-202ENST00000414620 MRPL55Q7Z7F7 128 aaKnown RBP9.3□□□□□ -0.92
ACTB-202ENST00000414620 COMMD7Q86VX2 200 aa9.3□□□□□ -0.92
ACTB-202ENST00000414620 SEC11CQ9BY50 192 aa9.3□□□□□ -0.92
ACTB-202ENST00000414620 MRPL18Q9H0U6 180 aaKnown RBP9.3□□□□□ -0.92
ACTB-202ENST00000414620 SMCO4Q9NRQ5 59 aa9.3□□□□□ -0.92
ACTB-202ENST00000414620 RNF213Q63HN8 5207 aa9.3□□□□□ -0.92
ACTB-202ENST00000414620 LPAP08519 4548 aa9.3□□□□□ -0.92
ACTB-202ENST00000414620 IGLV5-45A0A087WSX0 123 aa9.29□□□□□ -0.92
ACTB-202ENST00000414620 LINC01546A6NGU7 62 aa9.29□□□□□ -0.92
ACTB-202ENST00000414620 FABP9Q0Z7S8 132 aa9.29□□□□□ -0.92
ACTB-202ENST00000414620 CST9LQ9H4G1 147 aa9.29□□□□□ -0.92
ACTB-202ENST00000414620 RPL37AP8A6NKH3 93 aa9.28□□□□□ -0.92
ACTB-202ENST00000414620 RAB5BP61020 215 aa9.28□□□□□ -0.92
ACTB-202ENST00000414620 PMVKQ15126 192 aa9.28□□□□□ -0.92
ACTB-202ENST00000414620 GAGE10A6NGK3 116 aa9.27□□□□□ -0.93
ACTB-202ENST00000414620 TP73-AS1Q9UF72 201 aa9.27□□□□□ -0.93
ACTB-202ENST00000414620 LINC01549A6NIU2 74 aa9.26□□□□□ -0.93
ACTB-202ENST00000414620 RPL13AP40429 203 aaKnown RBP9.26□□□□□ -0.93
ACTB-202ENST00000414620 COX19Q49B96 90 aa9.26□□□□□ -0.93
ACTB-202ENST00000414620 LINC00167Q96N53 147 aa9.26□□□□□ -0.93
ACTB-202ENST00000414620 RPS10P5Q9NQ39 176 aa9.26□□□□□ -0.93
ACTB-202ENST00000414620 BCE1O60756 84 aa9.25□□□□□ -0.93
ACTB-202ENST00000414620 NDUFA6P56556 154 aa9.25□□□□□ -0.93
ACTB-202ENST00000414620 CARHSP1Q9Y2V2 147 aaKnown RBP9.24□□□□□ -0.93
ACTB-202ENST00000414620 H3BRM9 83 aa9.23□□□□□ -0.93
ACTB-202ENST00000414620 SCO1O75880 301 aa9.23□□□□□ -0.93
ACTB-202ENST00000414620 RPL28P46779 137 aaKnown RBP9.23□□□□□ -0.93
ACTB-202ENST00000414620 PRR4Q16378 134 aa9.23□□□□□ -0.93
ACTB-202ENST00000414620 NKAPP1Q8N9T2 125 aa9.23□□□□□ -0.93
ACTB-202ENST00000414620 A0A096LNJ9 63 aa9.22□□□□□ -0.93
ACTB-202ENST00000414620 ATP5LO75964 103 aa9.22□□□□□ -0.93
ACTB-202ENST00000414620 IGLC3P0DOY3 106 aa9.22□□□□□ -0.93
ACTB-202ENST00000414620 PFN2P35080 140 aa9.22□□□□□ -0.93
ACTB-202ENST00000414620 RHEBQ15382 184 aa9.22□□□□□ -0.93
ACTB-202ENST00000414620 PMCHL1Q16048 86 aa9.22□□□□□ -0.93
ACTB-202ENST00000414620 URB1-AS1Q96HZ7 61 aa9.22□□□□□ -0.93
ACTB-202ENST00000414620 A0A087X002 238 aa9.21□□□□□ -0.94
ACTB-202ENST00000414620 TSPAN13O95857 204 aa9.21□□□□□ -0.94
ACTB-202ENST00000414620 C10orf91Q5T1B1 145 aa9.21□□□□□ -0.94
ACTB-202ENST00000414620 TRAPPC1Q9Y5R8 145 aa9.21□□□□□ -0.94
ACTB-202ENST00000414620 IGLV5-37A0A075B6J1 123 aa9.2□□□□□ -0.94
ACTB-202ENST00000414620 ZNF22P17026 224 aaPredicted RBP9.2□□□□□ -0.94
ACTB-202ENST00000414620 C18orf32Q8TCD1 76 aa9.2□□□□□ -0.94
ACTB-202ENST00000414620 IGKV2-28A0A075B6P5 120 aa9.19□□□□□ -0.94
ACTB-202ENST00000414620 IGKV2D-28P01615 120 aa9.19□□□□□ -0.94
ACTB-202ENST00000414620 HBDP02042 147 aa9.19□□□□□ -0.94
ACTB-202ENST00000414620 UBE2AP49459 152 aa9.19□□□□□ -0.94
ACTB-202ENST00000414620 ANAPC11Q9NYG5 84 aa9.19□□□□□ -0.94
ACTB-202ENST00000414620 IGLV5-39A0A0G2JS06 123 aa9.18□□□□□ -0.94
ACTB-202ENST00000414620 ZNF625Q96I27 306 aaPredicted RBP9.18□□□□□ -0.94
ACTB-202ENST00000414620 LINC00614P0C842 121 aa9.17□□□□□ -0.94
ACTB-202ENST00000414620 TYMSOSQ8TAI1 123 aa9.17□□□□□ -0.94
ACTB-202ENST00000414620 ERG28Q9UKR5 140 aa9.17□□□□□ -0.94
ACTB-202ENST00000414620 C11orf86A6NJI1 115 aa9.16□□□□□ -0.94
ACTB-202ENST00000414620 CRYGAP11844 174 aa9.16□□□□□ -0.94
ACTB-202ENST00000414620 SND1-IT1Q9HBX3 110 aa9.16□□□□□ -0.94
ACTB-202ENST00000414620 VPREB1P12018 145 aa9.15□□□□□ -0.94
ACTB-202ENST00000414620 PRLHP81277 87 aa9.15□□□□□ -0.94
ACTB-202ENST00000414620 TMEM170BQ5T4T1 132 aa9.15□□□□□ -0.94
ACTB-202ENST00000414620 BAGE3Q86Y29 109 aa9.15□□□□□ -0.94
ACTB-202ENST00000414620 KRTAP13-1Q8IUC0 172 aa9.15□□□□□ -0.94
ACTB-202ENST00000414620 APOC3P02656 99 aa9.14□□□□□ -0.95
ACTB-202ENST00000414620 TMEM238C9JI98 176 aa9.13□□□□□ -0.95
ACTB-202ENST00000414620 KRTAP13-2Q52LG2 175 aa9.13□□□□□ -0.95
ACTB-202ENST00000414620 FAM19A1Q7Z5A9 133 aa9.13□□□□□ -0.95
ACTB-202ENST00000414620 Q8NDZ9 215 aa9.12□□□□□ -0.95
ACTB-202ENST00000414620 TMEM126AQ9H061 195 aa9.11□□□□□ -0.95
ACTB-202ENST00000414620 CHTOPQ9Y3Y2 248 aaKnown RBP9.11□□□□□ -0.95
ACTB-202ENST00000414620 A0A0U1RRA0 63 aa9.1□□□□□ -0.95
ACTB-202ENST00000414620 RPL24P83731 157 aaKnown RBP9.1□□□□□ -0.95
ACTB-202ENST00000414620 COX17Q14061 63 aa9.1□□□□□ -0.95
ACTB-202ENST00000414620 M0R378 163 aa9.08□□□□□ -0.96
ACTB-202ENST00000414620 SNAPINO95295 136 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms