RNA–Protein interactions for RNA: ENST00000412714.1

LINC00388-201, long intergenic non-protein coding RNA 388, humanhuman

TSL 5 BASIC

Gene LINC00388, Length 663 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00388-201ENST00000412714 IGHV3-33P01772 117 aa8.44□□□□□ -1.06
LINC00388-201ENST00000412714 IGHV3-30-3P0DP02 117 aa8.44□□□□□ -1.06
LINC00388-201ENST00000412714 IGHV3-30-5P0DP03 117 aa8.44□□□□□ -1.06
LINC00388-201ENST00000412714 LELP1Q5T871 98 aa8.44□□□□□ -1.06
LINC00388-201ENST00000412714 Q8N814 137 aa8.44□□□□□ -1.06
LINC00388-201ENST00000412714 ORAOV1Q8WV07 137 aa8.44□□□□□ -1.06
LINC00388-201ENST00000412714 TM2D2Q9BX73 214 aa8.44□□□□□ -1.06
LINC00388-201ENST00000412714 IGLV5-39A0A0G2JS06 123 aa8.43□□□□□ -1.06
LINC00388-201ENST00000412714 HAMPP81172 84 aa8.43□□□□□ -1.06
LINC00388-201ENST00000412714 CDKN2A-AS1Q9UH64 79 aa8.43□□□□□ -1.06
LINC00388-201ENST00000412714 FLG2Q5D862 2391 aaPredicted RBP8.42□□□□□ -1.06
LINC00388-201ENST00000412714 IGLV4-60A0A075B6I1 120 aa8.42□□□□□ -1.06
LINC00388-201ENST00000412714 TRAV13-1A0A0B4J241 112 aa8.42□□□□□ -1.06
LINC00388-201ENST00000412714 A6NDN8 102 aa8.42□□□□□ -1.06
LINC00388-201ENST00000412714 SCGB1D4Q6XE38 83 aa8.42□□□□□ -1.06
LINC00388-201ENST00000412714 CEND1Q8N111 149 aa8.42□□□□□ -1.06
LINC00388-201ENST00000412714 SPANXB1Q9NS25 103 aaPredicted RBP8.42□□□□□ -1.06
LINC00388-201ENST00000412714 MYCBP2O75592 4640 aa8.42□□□□□ -1.06
LINC00388-201ENST00000412714 SPINK8P0C7L1 97 aa8.41□□□□□ -1.06
LINC00388-201ENST00000412714 RBX1P62877 108 aa8.41□□□□□ -1.06
LINC00388-201ENST00000412714 DNAH8Q96JB1 4490 aa8.4□□□□□ -1.06
LINC00388-201ENST00000412714 IGHV3-64A0A075B6Q5 118 aa8.4□□□□□ -1.06
LINC00388-201ENST00000412714 TRAV8-3A0A0A6YYJ7 113 aa8.4□□□□□ -1.06
LINC00388-201ENST00000412714 SMIM1B2RUZ4 78 aa8.4□□□□□ -1.06
LINC00388-201ENST00000412714 COX6A2Q02221 97 aa8.4□□□□□ -1.06
LINC00388-201ENST00000412714 HIST1H4GQ99525 98 aa8.4□□□□□ -1.06
LINC00388-201ENST00000412714 SRRM2Q9UQ35 2752 aaKnown RBP8.39□□□□□ -1.07
LINC00388-201ENST00000412714 TAX1BP3O14907 124 aa8.39□□□□□ -1.07
LINC00388-201ENST00000412714 NDUFA1O15239 70 aa8.39□□□□□ -1.07
LINC00388-201ENST00000412714 CCL25O15444 150 aa8.39□□□□□ -1.07
LINC00388-201ENST00000412714 FXYD2P54710 66 aa8.39□□□□□ -1.07
LINC00388-201ENST00000412714 COX11Q9Y6N1 276 aa8.39□□□□□ -1.07
LINC00388-201ENST00000412714 NDUFA12Q9UI09 145 aa8.38□□□□□ -1.07
LINC00388-201ENST00000412714 IGHV3OR16-9A0A0B4J2B5 98 aa8.37□□□□□ -1.07
LINC00388-201ENST00000412714 A0A0J9YXY3 114 aa8.37□□□□□ -1.07
LINC00388-201ENST00000412714 LINC00959A0A1B0GUT2 108 aa8.37□□□□□ -1.07
LINC00388-201ENST00000412714 A0A1B0GWB2 263 aa8.37□□□□□ -1.07
LINC00388-201ENST00000412714 TMEM238C9JI98 176 aa8.37□□□□□ -1.07
LINC00388-201ENST00000412714 TMEM262E9PQX1 116 aa8.36□□□□□ -1.07
LINC00388-201ENST00000412714 TIMM17BO60830 172 aa8.36□□□□□ -1.07
LINC00388-201ENST00000412714 LINC01561Q8N1V8 128 aa8.36□□□□□ -1.07
LINC00388-201ENST00000412714 Q8N3U1 123 aa8.36□□□□□ -1.07
LINC00388-201ENST00000412714 FAM30AQ9NZY2 134 aa8.36□□□□□ -1.07
LINC00388-201ENST00000412714 A0A087WZ39 114 aa8.35□□□□□ -1.07
LINC00388-201ENST00000412714 TMEM238LA0A1B0GVL6 79 aa8.35□□□□□ -1.07
LINC00388-201ENST00000412714 A6NJY4 79 aa8.35□□□□□ -1.07
LINC00388-201ENST00000412714 LECT2O14960 151 aa8.35□□□□□ -1.07
LINC00388-201ENST00000412714 PLA2G1BP04054 148 aaKnown RBP8.35□□□□□ -1.07
LINC00388-201ENST00000412714 PTTG1IPP53801 180 aa8.35□□□□□ -1.07
LINC00388-201ENST00000412714 WFDC2Q14508 124 aa8.35□□□□□ -1.07
LINC00388-201ENST00000412714 RMI2Q96E14 147 aa8.35□□□□□ -1.07
LINC00388-201ENST00000412714 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.34□□□□□ -1.07
LINC00388-201ENST00000412714 J3QL48 77 aa8.34□□□□□ -1.07
LINC00388-201ENST00000412714 SRSF9Q13242 221 aaKnown RBP eCLIP8.34□□□□□ -1.07
LINC00388-201ENST00000412714 SS18Q15532 418 aa8.34□□□□□ -1.07
LINC00388-201ENST00000412714 ZNF625Q96I27 306 aaPredicted RBP8.34□□□□□ -1.07
LINC00388-201ENST00000412714 LITAFQ99732 161 aa8.34□□□□□ -1.07
LINC00388-201ENST00000412714 SPANXDQ9BXN6 97 aa8.34□□□□□ -1.07
LINC00388-201ENST00000412714 SPANXCQ9NY87 97 aa8.34□□□□□ -1.07
LINC00388-201ENST00000412714 IGKV3OR2-268A0A0C4DH90 116 aa8.33□□□□□ -1.08
LINC00388-201ENST00000412714 SMIM13P0DJ93 91 aa8.33□□□□□ -1.08
LINC00388-201ENST00000412714 Q6ZVH6 145 aa8.33□□□□□ -1.08
LINC00388-201ENST00000412714 NHP2Q9NX24 153 aaKnown RBP8.33□□□□□ -1.08
LINC00388-201ENST00000412714 C9orf118A6NHY6 69 aa8.32□□□□□ -1.08
LINC00388-201ENST00000412714 K7ERJ3 54 aa8.32□□□□□ -1.08
LINC00388-201ENST00000412714 ANGP03950 147 aaKnown RBP8.32□□□□□ -1.08
LINC00388-201ENST00000412714 HERV-K104P63124 156 aa8.32□□□□□ -1.08
LINC00388-201ENST00000412714 REG3AQ06141 175 aa8.32□□□□□ -1.08
LINC00388-201ENST00000412714 SFTA2Q6UW10 78 aa8.32□□□□□ -1.08
LINC00388-201ENST00000412714 Q6ZSA8 131 aa8.32□□□□□ -1.08
LINC00388-201ENST00000412714 LINC00528Q8N1L1 170 aa8.32□□□□□ -1.08
LINC00388-201ENST00000412714 LINC00269Q8N2A0 174 aa8.32□□□□□ -1.08
LINC00388-201ENST00000412714 PRR34Q9NV39 138 aa8.32□□□□□ -1.08
LINC00388-201ENST00000412714 IGKV2D-24A0A075B6R9 120 aa8.31□□□□□ -1.08
LINC00388-201ENST00000412714 MIAQ16674 131 aa8.31□□□□□ -1.08
LINC00388-201ENST00000412714 CD164L2Q6UWJ8 174 aa8.31□□□□□ -1.08
LINC00388-201ENST00000412714 COX7B2Q8TF08 81 aa8.31□□□□□ -1.08
LINC00388-201ENST00000412714 XCL1P47992 114 aa8.3□□□□□ -1.08
LINC00388-201ENST00000412714 CLPSL2Q6UWE3 100 aa8.3□□□□□ -1.08
LINC00388-201ENST00000412714 KLK12Q9UKR0 248 aa8.3□□□□□ -1.08
LINC00388-201ENST00000412714 RPL24P83731 157 aaKnown RBP8.29□□□□□ -1.08
LINC00388-201ENST00000412714 CHCHD10Q8WYQ3 142 aaPredicted RBP8.29□□□□□ -1.08
LINC00388-201ENST00000412714 UBE2WQ96B02 151 aa8.29□□□□□ -1.08
LINC00388-201ENST00000412714 PPDPFQ9H3Y8 114 aa8.29□□□□□ -1.08
LINC00388-201ENST00000412714 COX7A2LO14548 114 aa8.28□□□□□ -1.08
LINC00388-201ENST00000412714 IFITM1P13164 125 aa8.28□□□□□ -1.08
LINC00388-201ENST00000412714 CIRBPQ14011 172 aaKnown RBP8.28□□□□□ -1.08
LINC00388-201ENST00000412714 LINC01620Q4KN68 170 aa8.28□□□□□ -1.08
LINC00388-201ENST00000412714 C5orf38Q86SI9 138 aa8.28□□□□□ -1.08
LINC00388-201ENST00000412714 Q8IZM0 81 aa8.28□□□□□ -1.08
LINC00388-201ENST00000412714 A0A0B4J2C4 111 aa8.27□□□□□ -1.09
LINC00388-201ENST00000412714 ADAMTSL4-AS1Q5T5F5 129 aa8.27□□□□□ -1.09
LINC00388-201ENST00000412714 SCXQ7RTU7 201 aa8.27□□□□□ -1.09
LINC00388-201ENST00000412714 RAB37Q96AX2 223 aa8.27□□□□□ -1.09
LINC00388-201ENST00000412714 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.26□□□□□ -1.09
LINC00388-201ENST00000412714 TRAV8-4A0A0B4J246 113 aa8.26□□□□□ -1.09
LINC00388-201ENST00000412714 A0A1W2PPM0 123 aa8.26□□□□□ -1.09
LINC00388-201ENST00000412714 KRTAP29-1A8MX34 341 aaPredicted RBP8.26□□□□□ -1.09
LINC00388-201ENST00000412714 H3BUT2 72 aa8.26□□□□□ -1.09
LINC00388-201ENST00000412714 FOXI1Q12951 378 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms