RNA–Protein interactions for RNA: ENST00000412157.2

SNRNP35-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 35, humanhuman

TSL 1 (best) BASIC

Gene SNRNP35, Length 1,140 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP35-202ENST00000412157 CKS1BP61024 79 aa7.8□□□□□ -1.16
SNRNP35-202ENST00000412157 SPAG11BQ08648 103 aa7.8□□□□□ -1.16
SNRNP35-202ENST00000412157 ZNF625Q96I27 306 aaPredicted RBP7.8□□□□□ -1.16
SNRNP35-202ENST00000412157 STAB2Q8WWQ8 2551 aa7.8□□□□□ -1.16
SNRNP35-202ENST00000412157 A6NDN8 102 aa7.79□□□□□ -1.16
SNRNP35-202ENST00000412157 COL5A1-AS1Q5SY13 56 aa7.79□□□□□ -1.16
SNRNP35-202ENST00000412157 TMEM238LA0A1B0GVL6 79 aa7.78□□□□□ -1.16
SNRNP35-202ENST00000412157 A6NJY4 79 aa7.78□□□□□ -1.16
SNRNP35-202ENST00000412157 Q6ZVH6 145 aa7.78□□□□□ -1.16
SNRNP35-202ENST00000412157 TM2D2Q9BX73 214 aa7.78□□□□□ -1.16
SNRNP35-202ENST00000412157 SPANXDQ9BXN6 97 aa7.78□□□□□ -1.16
SNRNP35-202ENST00000412157 SPANXCQ9NY87 97 aa7.78□□□□□ -1.16
SNRNP35-202ENST00000412157 DNAH7Q8WXX0 4024 aa7.78□□□□□ -1.16
SNRNP35-202ENST00000412157 FXYD2P54710 66 aa7.77□□□□□ -1.17
SNRNP35-202ENST00000412157 TTC32Q5I0X7 151 aa7.77□□□□□ -1.17
SNRNP35-202ENST00000412157 KRTAP26-1Q6PEX3 210 aa7.77□□□□□ -1.17
SNRNP35-202ENST00000412157 COX11Q9Y6N1 276 aa7.77□□□□□ -1.17
SNRNP35-202ENST00000412157 COPS9Q8WXC6 57 aa7.76□□□□□ -1.17
SNRNP35-202ENST00000412157 ZNF561-AS1K7EIQ3 104 aa7.75□□□□□ -1.17
SNRNP35-202ENST00000412157 SMIM13P0DJ93 91 aa7.75□□□□□ -1.17
SNRNP35-202ENST00000412157 IFITM1P13164 125 aa7.75□□□□□ -1.17
SNRNP35-202ENST00000412157 RPL24P83731 157 aaKnown RBP7.75□□□□□ -1.17
SNRNP35-202ENST00000412157 KIAA0087Q14695 138 aa7.75□□□□□ -1.17
SNRNP35-202ENST00000412157 LITAFQ99732 161 aa7.75□□□□□ -1.17
SNRNP35-202ENST00000412157 LYSTQ99698 3801 aa7.74□□□□□ -1.17
SNRNP35-202ENST00000412157 DNAH1Q9P2D7 4330 aa7.74□□□□□ -1.17
SNRNP35-202ENST00000412157 A0A0U1RRA0 63 aa7.74□□□□□ -1.17
SNRNP35-202ENST00000412157 LINC00158P58513 81 aa7.74□□□□□ -1.17
SNRNP35-202ENST00000412157 C2orf82Q6UX34 121 aa7.74□□□□□ -1.17
SNRNP35-202ENST00000412157 NHP2Q9NX24 153 aaKnown RBP7.74□□□□□ -1.17
SNRNP35-202ENST00000412157 ERG28Q9UKR5 140 aa7.74□□□□□ -1.17
SNRNP35-202ENST00000412157 HIGD2BQ4VC39 106 aa7.73□□□□□ -1.17
SNRNP35-202ENST00000412157 ADAMTSL4-AS1Q5T5F5 129 aa7.73□□□□□ -1.17
SNRNP35-202ENST00000412157 MUSTN1Q8IVN3 82 aa7.73□□□□□ -1.17
SNRNP35-202ENST00000412157 C15orf56Q8N910 161 aa7.73□□□□□ -1.17
SNRNP35-202ENST00000412157 NBDYA0A0U1RRE5 68 aa7.72□□□□□ -1.17
SNRNP35-202ENST00000412157 F8WDY8 70 aa7.72□□□□□ -1.17
SNRNP35-202ENST00000412157 PFN2P35080 140 aa7.72□□□□□ -1.17
SNRNP35-202ENST00000412157 NPC2P61916 151 aa7.72□□□□□ -1.17
SNRNP35-202ENST00000412157 DAND5Q8N907 189 aa7.72□□□□□ -1.17
SNRNP35-202ENST00000412157 NTN5Q8WTR8 489 aaPredicted RBP7.72□□□□□ -1.17
SNRNP35-202ENST00000412157 CAMK2N2Q96S95 79 aa7.72□□□□□ -1.17
SNRNP35-202ENST00000412157 STARD9Q9P2P6 4700 aa7.72□□□□□ -1.17
SNRNP35-202ENST00000412157 GVQW2A0A096LPI5 108 aaPredicted RBP7.71□□□□□ -1.18
SNRNP35-202ENST00000412157 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.71□□□□□ -1.18
SNRNP35-202ENST00000412157 PSCAO43653 123 aa7.71□□□□□ -1.18
SNRNP35-202ENST00000412157 COX17Q14061 63 aa7.71□□□□□ -1.18
SNRNP35-202ENST00000412157 C6orf223Q8N319 242 aa7.71□□□□□ -1.18
SNRNP35-202ENST00000412157 MIR7-3HGQ8N6C7 128 aa7.71□□□□□ -1.18
SNRNP35-202ENST00000412157 LINC00308Q8TCZ7 52 aa7.71□□□□□ -1.18
SNRNP35-202ENST00000412157 LINC00526Q96FQ7 95 aa7.71□□□□□ -1.18
SNRNP35-202ENST00000412157 C2orf48Q96LS8 159 aa7.71□□□□□ -1.18
SNRNP35-202ENST00000412157 KRTAP1-5Q9BYS1 174 aa7.71□□□□□ -1.18
SNRNP35-202ENST00000412157 A4D1N5 150 aa7.7□□□□□ -1.18
SNRNP35-202ENST00000412157 UNQ6190/PRO20217Q6UXQ8 127 aa7.7□□□□□ -1.18
SNRNP35-202ENST00000412157 TRBV30A0A0K0K1B3 111 aa7.69□□□□□ -1.18
SNRNP35-202ENST00000412157 USP17L23D6RBM5 183 aa7.69□□□□□ -1.18
SNRNP35-202ENST00000412157 K7ERJ3 54 aa7.69□□□□□ -1.18
SNRNP35-202ENST00000412157 TAX1BP3O14907 124 aa7.69□□□□□ -1.18
SNRNP35-202ENST00000412157 RAB37Q96AX2 223 aa7.69□□□□□ -1.18
SNRNP35-202ENST00000412157 PPDPFQ9H3Y8 114 aa7.69□□□□□ -1.18
SNRNP35-202ENST00000412157 A0A1B0GWB2 263 aa7.68□□□□□ -1.18
SNRNP35-202ENST00000412157 HYDINQ4G0P3 5121 aa7.68□□□□□ -1.18
SNRNP35-202ENST00000412157 A0A0B4J2C4 111 aa7.67□□□□□ -1.18
SNRNP35-202ENST00000412157 SYCNQ0VAF6 134 aa7.67□□□□□ -1.18
SNRNP35-202ENST00000412157 C10orf25Q5T742 122 aa7.67□□□□□ -1.18
SNRNP35-202ENST00000412157 C6orf48Q9UBA6 75 aa7.67□□□□□ -1.18
SNRNP35-202ENST00000412157 A0A1B0GV90 55 aa7.66□□□□□ -1.18
SNRNP35-202ENST00000412157 CFC1BP0CG36 223 aa7.66□□□□□ -1.18
SNRNP35-202ENST00000412157 CFC1P0CG37 223 aa7.66□□□□□ -1.18
SNRNP35-202ENST00000412157 C14orf177Q52M58 125 aa7.66□□□□□ -1.18
SNRNP35-202ENST00000412157 C9orf116Q5BN46 136 aaPredicted RBP7.66□□□□□ -1.18
SNRNP35-202ENST00000412157 SOSTDC1Q6X4U4 206 aa7.66□□□□□ -1.18
SNRNP35-202ENST00000412157 Q6ZRU5 148 aa7.66□□□□□ -1.18
SNRNP35-202ENST00000412157 CARD19Q96LW7 228 aa7.66□□□□□ -1.18
SNRNP35-202ENST00000412157 KRTAP17-1Q9BYP8 105 aa7.66□□□□□ -1.18
SNRNP35-202ENST00000412157 CSMD3Q7Z407 3707 aa7.65□□□□□ -1.18
SNRNP35-202ENST00000412157 C9orf118A6NHY6 69 aa7.65□□□□□ -1.18
SNRNP35-202ENST00000412157 M0R2N4 97 aa7.65□□□□□ -1.18
SNRNP35-202ENST00000412157 LY6G6CO95867 125 aa7.65□□□□□ -1.18
SNRNP35-202ENST00000412157 SND1-IT1Q9HBX3 110 aa7.65□□□□□ -1.18
SNRNP35-202ENST00000412157 PRO1854Q9UHT4 67 aa7.65□□□□□ -1.18
SNRNP35-202ENST00000412157 LECT2O14960 151 aa7.64□□□□□ -1.19
SNRNP35-202ENST00000412157 H3BUT2 72 aa7.63□□□□□ -1.19
SNRNP35-202ENST00000412157 EIF4EBP3O60516 100 aaPredicted RBP7.63□□□□□ -1.19
SNRNP35-202ENST00000412157 Q1RN00 199 aa7.63□□□□□ -1.19
SNRNP35-202ENST00000412157 RNF151Q2KHN1 245 aa7.63□□□□□ -1.19
SNRNP35-202ENST00000412157 LINC00476Q8WZB0 136 aa7.63□□□□□ -1.19
SNRNP35-202ENST00000412157 PGPEP1Q9NXJ5 209 aa7.63□□□□□ -1.19
SNRNP35-202ENST00000412157 NAA38Q9BRA0 125 aaKnown RBP7.62□□□□□ -1.19
SNRNP35-202ENST00000412157 ALMS1Q8TCU4 4167 aa7.61□□□□□ -1.19
SNRNP35-202ENST00000412157 TRAV13-2A0A0B4J235 113 aa7.61□□□□□ -1.19
SNRNP35-202ENST00000412157 LOC107984156A0A0G2JMH3 177 aa7.61□□□□□ -1.19
SNRNP35-202ENST00000412157 TSPAN13O95857 204 aa7.61□□□□□ -1.19
SNRNP35-202ENST00000412157 RPL13AP40429 203 aaKnown RBP7.61□□□□□ -1.19
SNRNP35-202ENST00000412157 ARL17AQ8IVW1 177 aa7.61□□□□□ -1.19
SNRNP35-202ENST00000412157 KRTAP3-3Q9BYR6 98 aa7.61□□□□□ -1.19
SNRNP35-202ENST00000412157 KRTAP3-2Q9BYR7 98 aa7.61□□□□□ -1.19
SNRNP35-202ENST00000412157 NDUFC2-KCTD14E9PQ53 114 aa7.6□□□□□ -1.19
SNRNP35-202ENST00000412157 H7C2G1 150 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms