RNA–Protein interactions for RNA: ENST00000411993.1

HDAC9-205, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 626 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-205ENST00000411993 KRTAP6-1Q3LI64 71 aa-0.16□□□□□ -2.44
HDAC9-205ENST00000411993 LINC00846Q9NV44 126 aa-0.16□□□□□ -2.44
HDAC9-205ENST00000411993 A0A0G2JMZ2 1700 aa-0.16□□□□□ -2.44
HDAC9-205ENST00000411993 PLEKHH2Q8IVE3 1493 aa-0.16□□□□□ -2.44
HDAC9-205ENST00000411993 CSMD3Q7Z407 3707 aa-0.16□□□□□ -2.44
HDAC9-205ENST00000411993 MYCBP2O75592 4640 aa-0.17□□□□□ -2.44
HDAC9-205ENST00000411993 TOPAZ1Q8N9V7 1692 aa-0.17□□□□□ -2.44
HDAC9-205ENST00000411993 A0A0G2JND7 137 aa-0.17□□□□□ -2.44
HDAC9-205ENST00000411993 A0A1B0GU69 56 aa-0.17□□□□□ -2.44
HDAC9-205ENST00000411993 C7orf77A4D0Y5 90 aa-0.17□□□□□ -2.44
HDAC9-205ENST00000411993 GNGT2O14610 69 aa-0.17□□□□□ -2.44
HDAC9-205ENST00000411993 CHD1O14646 1710 aa-0.17□□□□□ -2.44
HDAC9-205ENST00000411993 ABCC5O15440 1437 aa-0.17□□□□□ -2.44
HDAC9-205ENST00000411993 WNK1Q9H4A3 2382 aa-0.17□□□□□ -2.44
HDAC9-205ENST00000411993 TNXBP22105 4242 aa-0.17□□□□□ -2.44
HDAC9-205ENST00000411993 EP300Q09472 2414 aaPredicted RBP-0.17□□□□□ -2.44
HDAC9-205ENST00000411993 HSPG2P98160 4391 aa-0.17□□□□□ -2.44
HDAC9-205ENST00000411993 APC2O95996 2303 aa-0.18□□□□□ -2.44
HDAC9-205ENST00000411993 ZANQ9Y493 2812 aa-0.18□□□□□ -2.44
HDAC9-205ENST00000411993 PDCD11Q14690 1871 aaKnown RBP-0.18□□□□□ -2.44
HDAC9-205ENST00000411993 ABCA3Q99758 1704 aa-0.18□□□□□ -2.44
HDAC9-205ENST00000411993 CHD8Q9HCK8 2581 aa-0.18□□□□□ -2.44
HDAC9-205ENST00000411993 ANKRD17O75179 2603 aaKnown RBP-0.18□□□□□ -2.44
HDAC9-205ENST00000411993 CPSF4LA6NMK7 179 aaKnown RBP-0.18□□□□□ -2.44
HDAC9-205ENST00000411993 H3BQF6 201 aa-0.18□□□□□ -2.44
HDAC9-205ENST00000411993 S100PP25815 95 aa-0.18□□□□□ -2.44
HDAC9-205ENST00000411993 PMCHL1Q16048 86 aa-0.18□□□□□ -2.44
HDAC9-205ENST00000411993 PSMG4Q5JS54 123 aa-0.18□□□□□ -2.44
HDAC9-205ENST00000411993 C6orf201Q7Z4U5 140 aa-0.18□□□□□ -2.44
HDAC9-205ENST00000411993 CACFD1Q9UGQ2 172 aa-0.18□□□□□ -2.44
HDAC9-205ENST00000411993 APLNQ9ULZ1 77 aa-0.18□□□□□ -2.44
HDAC9-205ENST00000411993 CCDC141Q6ZP82 1450 aa-0.18□□□□□ -2.44
HDAC9-205ENST00000411993 FMN2Q9NZ56 1722 aa-0.18□□□□□ -2.44
HDAC9-205ENST00000411993 URB1O60287 2271 aaKnown RBP-0.18□□□□□ -2.44
HDAC9-205ENST00000411993 DCHS2Q6V1P9 2916 aa-0.19□□□□□ -2.44
HDAC9-205ENST00000411993 TMEM218A2RU14 115 aa-0.19□□□□□ -2.44
HDAC9-205ENST00000411993 M0R2T5 61 aa-0.19□□□□□ -2.44
HDAC9-205ENST00000411993 NDUFC1O43677 76 aa-0.19□□□□□ -2.44
HDAC9-205ENST00000411993 SPRR2BP35325 72 aa-0.19□□□□□ -2.44
HDAC9-205ENST00000411993 ASIPP42127 132 aa-0.19□□□□□ -2.44
HDAC9-205ENST00000411993 GNGT1P63211 74 aa-0.19□□□□□ -2.44
HDAC9-205ENST00000411993 DEFB107AQ8IZN7 70 aa-0.19□□□□□ -2.44
HDAC9-205ENST00000411993 CRIPTQ9P021 101 aa-0.19□□□□□ -2.44
HDAC9-205ENST00000411993 AP4S1Q9Y587 144 aa-0.19□□□□□ -2.44
HDAC9-205ENST00000411993 COL4A6Q14031 1691 aa-0.19□□□□□ -2.44
HDAC9-205ENST00000411993 PCLOQ9Y6V0 5065 aa-0.19□□□□□ -2.44
HDAC9-205ENST00000411993 KMT2CQ8NEZ4 4911 aaKnown RBP-0.19□□□□□ -2.44
HDAC9-205ENST00000411993 ZFYVE16Q7Z3T8 1539 aa-0.19□□□□□ -2.44
HDAC9-205ENST00000411993 HUWE1Q7Z6Z7 4374 aaKnown RBP-0.2□□□□□ -2.44
HDAC9-205ENST00000411993 SETXQ7Z333 2677 aaKnown RBP-0.2□□□□□ -2.44
HDAC9-205ENST00000411993 NCOA3Q9Y6Q9 1424 aa-0.2□□□□□ -2.44
HDAC9-205ENST00000411993 IQSEC2Q5JU85 1478 aa-0.2□□□□□ -2.44
HDAC9-205ENST00000411993 MLH3Q9UHC1 1453 aa-0.2□□□□□ -2.44
HDAC9-205ENST00000411993 FLNBO75369 2602 aaKnown RBP-0.2□□□□□ -2.44
HDAC9-205ENST00000411993 KNDC1Q76NI1 1749 aa-0.2□□□□□ -2.44
HDAC9-205ENST00000411993 ACANP16112 2415 aa-0.2□□□□□ -2.44
HDAC9-205ENST00000411993 TRBV25-1A0A075B6N4 114 aa-0.2□□□□□ -2.44
HDAC9-205ENST00000411993 H0Y9P7 68 aa-0.2□□□□□ -2.44
HDAC9-205ENST00000411993 I3L3M4 83 aa-0.2□□□□□ -2.44
HDAC9-205ENST00000411993 UQCRHP07919 91 aa-0.2□□□□□ -2.44
HDAC9-205ENST00000411993 S100A10P60903 97 aa-0.2□□□□□ -2.44
HDAC9-205ENST00000411993 PMCHL2Q9BQD1 86 aa-0.2□□□□□ -2.44
HDAC9-205ENST00000411993 TCEAL7Q9BRU2 100 aa-0.2□□□□□ -2.44
HDAC9-205ENST00000411993 DNAJC13O75165 2243 aa-0.2□□□□□ -2.44
HDAC9-205ENST00000411993 LRP2P98164 4655 aa-0.2□□□□□ -2.44
HDAC9-205ENST00000411993 KMT2AQ03164 3969 aa-0.2□□□□□ -2.44
HDAC9-205ENST00000411993 LPAP08519 4548 aa-0.2□□□□□ -2.44
HDAC9-205ENST00000411993 EDC4Q6P2E9 1401 aaKnown RBP-0.21□□□□□ -2.44
HDAC9-205ENST00000411993 MARF1Q9Y4F3 1742 aaKnown RBP-0.21□□□□□ -2.44
HDAC9-205ENST00000411993 PAPPA2Q9BXP8 1791 aa-0.21□□□□□ -2.44
HDAC9-205ENST00000411993 TENM2Q9NT68 2774 aa-0.21□□□□□ -2.44
HDAC9-205ENST00000411993 NKTRP30414 1462 aaKnown RBP-0.22□□□□□ -2.44
HDAC9-205ENST00000411993 PRDM15P57071 1507 aaPredicted RBP-0.22□□□□□ -2.44
HDAC9-205ENST00000411993 TARBP1Q13395 1621 aaKnown RBP-0.22□□□□□ -2.44
HDAC9-205ENST00000411993 TRAV30A0A087WSZ9 112 aa-0.22□□□□□ -2.44
HDAC9-205ENST00000411993 ATP6V1G2-DDX39BF2Z307 99 aa-0.22□□□□□ -2.44
HDAC9-205ENST00000411993 H7BZZ5 65 aa-0.22□□□□□ -2.44
HDAC9-205ENST00000411993 ATOX1O00244 68 aa-0.22□□□□□ -2.44
HDAC9-205ENST00000411993 MPC2O95563 127 aa-0.22□□□□□ -2.44
HDAC9-205ENST00000411993 MT-ATP8P03928 68 aa-0.22□□□□□ -2.44
HDAC9-205ENST00000411993 ARMS2P0C7Q2 107 aa-0.22□□□□□ -2.44
HDAC9-205ENST00000411993 C14orf144Q96I85 54 aa-0.22□□□□□ -2.44
HDAC9-205ENST00000411993 TRGV9Q99603 122 aa-0.22□□□□□ -2.44
HDAC9-205ENST00000411993 SRRM2Q9UQ35 2752 aaKnown RBP-0.22□□□□□ -2.44
HDAC9-205ENST00000411993 ANKRD36BQ8N2N9 1353 aa-0.22□□□□□ -2.45
HDAC9-205ENST00000411993 RYR3Q15413 4870 aa-0.22□□□□□ -2.45
HDAC9-205ENST00000411993 SHPRHQ149N8 1683 aa-0.23□□□□□ -2.45
HDAC9-205ENST00000411993 H1FX-AS1Q4G0G2 97 aa-0.23□□□□□ -2.45
HDAC9-205ENST00000411993 COL5A1-AS1Q5SY13 56 aa-0.23□□□□□ -2.45
HDAC9-205ENST00000411993 SERP2Q8N6R1 65 aa-0.23□□□□□ -2.45
HDAC9-205ENST00000411993 FYCO1Q9BQS8 1478 aa-0.23□□□□□ -2.45
HDAC9-205ENST00000411993 RAPGEF2Q9Y4G8 1499 aa-0.23□□□□□ -2.45
HDAC9-205ENST00000411993 ABCC2Q92887 1545 aa-0.23□□□□□ -2.45
HDAC9-205ENST00000411993 PEG3Q9GZU2 1588 aa-0.23□□□□□ -2.45
HDAC9-205ENST00000411993 CNOT1A5YKK6 2376 aaKnown RBP-0.24□□□□□ -2.45
HDAC9-205ENST00000411993 LRRC37AA6NMS7 1700 aa-0.24□□□□□ -2.45
HDAC9-205ENST00000411993 LINC00032P0C843 101 aa-0.24□□□□□ -2.45
HDAC9-205ENST00000411993 RBP2P50120 134 aa-0.24□□□□□ -2.45
HDAC9-205ENST00000411993 DEFB135Q30KP9 77 aa-0.24□□□□□ -2.45
HDAC9-205ENST00000411993 USH2AO75445 5202 aa-0.24□□□□□ -2.45
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms