RNA–Protein interactions for RNA: ENST00000409542.5

CHRNA1-205, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,460 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-205ENST00000409542 C10orf126Q8N4M7 172 aa8.6□□□□□ -1.03
CHRNA1-205ENST00000409542 CSDC2Q9Y534 153 aaKnown RBP8.6□□□□□ -1.03
CHRNA1-205ENST00000409542 A0A0J9YXY3 114 aa8.59□□□□□ -1.03
CHRNA1-205ENST00000409542 HAMPP81172 84 aa8.59□□□□□ -1.03
CHRNA1-205ENST00000409542 FAM19A3Q7Z5A8 133 aa8.59□□□□□ -1.03
CHRNA1-205ENST00000409542 GEMIN7Q9H840 131 aaKnown RBP8.59□□□□□ -1.03
CHRNA1-205ENST00000409542 IGHV3-64A0A075B6Q5 118 aa8.58□□□□□ -1.04
CHRNA1-205ENST00000409542 H3BNG1 76 aa8.58□□□□□ -1.04
CHRNA1-205ENST00000409542 CFC1BP0CG36 223 aa8.58□□□□□ -1.04
CHRNA1-205ENST00000409542 CFC1P0CG37 223 aa8.58□□□□□ -1.04
CHRNA1-205ENST00000409542 RPL24P83731 157 aaKnown RBP8.58□□□□□ -1.04
CHRNA1-205ENST00000409542 RNF151Q2KHN1 245 aa8.58□□□□□ -1.04
CHRNA1-205ENST00000409542 RNASE13Q5GAN3 156 aaKnown RBP8.58□□□□□ -1.04
CHRNA1-205ENST00000409542 A0A0B4J2C4 111 aa8.57□□□□□ -1.04
CHRNA1-205ENST00000409542 APOMO95445 188 aa8.57□□□□□ -1.04
CHRNA1-205ENST00000409542 DGAT2L7PQ6IED9 249 aa8.57□□□□□ -1.04
CHRNA1-205ENST00000409542 GTSF1LQ9H1H1 148 aa8.57□□□□□ -1.04
CHRNA1-205ENST00000409542 TRAV8-3A0A0A6YYJ7 113 aa8.57□□□□□ -1.04
CHRNA1-205ENST00000409542 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.57□□□□□ -1.04
CHRNA1-205ENST00000409542 TRBV6-4A0A1B0GX49 114 aa8.57□□□□□ -1.04
CHRNA1-205ENST00000409542 TIMM17BO60830 172 aa8.57□□□□□ -1.04
CHRNA1-205ENST00000409542 NTM-AS1Q6ZSK4 140 aa8.57□□□□□ -1.04
CHRNA1-205ENST00000409542 LITAFQ99732 161 aa8.57□□□□□ -1.04
CHRNA1-205ENST00000409542 SPANXDQ9BXN6 97 aa8.57□□□□□ -1.04
CHRNA1-205ENST00000409542 SPANXCQ9NY87 97 aa8.57□□□□□ -1.04
CHRNA1-205ENST00000409542 PRO1854Q9UHT4 67 aa8.57□□□□□ -1.04
CHRNA1-205ENST00000409542 NDUFA12Q9UI09 145 aa8.57□□□□□ -1.04
CHRNA1-205ENST00000409542 PRO0461Q9UI25 63 aa8.57□□□□□ -1.04
CHRNA1-205ENST00000409542 A0A087WTM6 91 aa8.56□□□□□ -1.04
CHRNA1-205ENST00000409542 A4D1N5 150 aa8.56□□□□□ -1.04
CHRNA1-205ENST00000409542 H3BMG7 143 aa8.56□□□□□ -1.04
CHRNA1-205ENST00000409542 H7C423 109 aa8.56□□□□□ -1.04
CHRNA1-205ENST00000409542 HERVK_113P63121 156 aa8.56□□□□□ -1.04
CHRNA1-205ENST00000409542 GAGE13Q4V321 117 aa8.56□□□□□ -1.04
CHRNA1-205ENST00000409542 VPS25Q9BRG1 176 aa8.56□□□□□ -1.04
CHRNA1-205ENST00000409542 DNAH8Q96JB1 4490 aa8.56□□□□□ -1.04
CHRNA1-205ENST00000409542 TRGV2A0A075B6R0 118 aa8.55□□□□□ -1.04
CHRNA1-205ENST00000409542 GAGE12JA6NER3 117 aa8.55□□□□□ -1.04
CHRNA1-205ENST00000409542 SPINK8P0C7L1 97 aa8.55□□□□□ -1.04
CHRNA1-205ENST00000409542 GAGE4Q13068 117 aa8.55□□□□□ -1.04
CHRNA1-205ENST00000409542 GAGE5Q13069 117 aa8.55□□□□□ -1.04
CHRNA1-205ENST00000409542 MUSTN1Q8IVN3 82 aa8.55□□□□□ -1.04
CHRNA1-205ENST00000409542 TRBV20-1A0A075B6N2 111 aa8.54□□□□□ -1.04
CHRNA1-205ENST00000409542 IGLV5-39A0A0G2JS06 123 aa8.54□□□□□ -1.04
CHRNA1-205ENST00000409542 LINC00694P0DN24 101 aa8.54□□□□□ -1.04
CHRNA1-205ENST00000409542 TMEM243Q9BU79 118 aa8.54□□□□□ -1.04
CHRNA1-205ENST00000409542 CDKN2A-AS1Q9UH64 79 aa8.54□□□□□ -1.04
CHRNA1-205ENST00000409542 NDUFA1O15239 70 aa8.53□□□□□ -1.04
CHRNA1-205ENST00000409542 IGHV3-33P01772 117 aa8.53□□□□□ -1.04
CHRNA1-205ENST00000409542 WFDC2Q14508 124 aa8.53□□□□□ -1.04
CHRNA1-205ENST00000409542 MIAQ16674 131 aa8.53□□□□□ -1.04
CHRNA1-205ENST00000409542 LINC00242Q5T6M2 205 aa8.53□□□□□ -1.04
CHRNA1-205ENST00000409542 CDC42SE2Q9NRR3 84 aa8.53□□□□□ -1.04
CHRNA1-205ENST00000409542 TRGV4A0A0C4DH28 118 aa8.52□□□□□ -1.05
CHRNA1-205ENST00000409542 LOC107984156A0A0G2JMH3 177 aa8.52□□□□□ -1.05
CHRNA1-205ENST00000409542 EIF4EBP3O60516 100 aaPredicted RBP8.52□□□□□ -1.05
CHRNA1-205ENST00000409542 ARL17AQ8IVW1 177 aa8.52□□□□□ -1.05
CHRNA1-205ENST00000409542 TMEM101Q96IK0 257 aa8.52□□□□□ -1.05
CHRNA1-205ENST00000409542 HMCN2Q8NDA2 5059 aa8.52□□□□□ -1.05
CHRNA1-205ENST00000409542 IFITM1P13164 125 aa8.51□□□□□ -1.05
CHRNA1-205ENST00000409542 COX6A2Q02221 97 aa8.51□□□□□ -1.05
CHRNA1-205ENST00000409542 FHL2Q14192 279 aa8.51□□□□□ -1.05
CHRNA1-205ENST00000409542 LYPD5Q6UWN5 251 aa8.51□□□□□ -1.05
CHRNA1-205ENST00000409542 ERG28Q9UKR5 140 aa8.51□□□□□ -1.05
CHRNA1-205ENST00000409542 FAM229AH3BQW9 127 aa8.51□□□□□ -1.05
CHRNA1-205ENST00000409542 UBE2L6O14933 153 aa8.51□□□□□ -1.05
CHRNA1-205ENST00000409542 PSMB2P49721 201 aa8.51□□□□□ -1.05
CHRNA1-205ENST00000409542 ATP6V0E2Q8NHE4 81 aa8.51□□□□□ -1.05
CHRNA1-205ENST00000409542 UBR4Q5T4S7 5183 aa8.5□□□□□ -1.05
CHRNA1-205ENST00000409542 J3QL48 77 aa8.5□□□□□ -1.05
CHRNA1-205ENST00000409542 J3QR89 54 aa8.5□□□□□ -1.05
CHRNA1-205ENST00000409542 PAX4O43316 350 aa8.5□□□□□ -1.05
CHRNA1-205ENST00000409542 ADAMTSL4-AS1Q5T5F5 129 aa8.5□□□□□ -1.05
CHRNA1-205ENST00000409542 ICOSQ9Y6W8 199 aa8.5□□□□□ -1.05
CHRNA1-205ENST00000409542 SMIM1B2RUZ4 78 aa8.49□□□□□ -1.05
CHRNA1-205ENST00000409542 TCL1BO95988 128 aa8.49□□□□□ -1.05
CHRNA1-205ENST00000409542 FAM30AQ9NZY2 134 aa8.49□□□□□ -1.05
CHRNA1-205ENST00000409542 TRAV13-1A0A0B4J241 112 aa8.48□□□□□ -1.05
CHRNA1-205ENST00000409542 LOC100131303A0A0U1RQF7 123 aa8.48□□□□□ -1.05
CHRNA1-205ENST00000409542 SMCPP49901 116 aaPredicted RBP8.48□□□□□ -1.05
CHRNA1-205ENST00000409542 CIRBPQ14011 172 aaKnown RBP8.48□□□□□ -1.05
CHRNA1-205ENST00000409542 ETDBQ3ZM63 59 aa8.48□□□□□ -1.05
CHRNA1-205ENST00000409542 WFDC10BQ8IUB3 73 aa8.48□□□□□ -1.05
CHRNA1-205ENST00000409542 LRP1Q07954 4544 aaKnown RBP8.48□□□□□ -1.05
CHRNA1-205ENST00000409542 TRBV6-8A0A0A6YYG3 113 aa8.47□□□□□ -1.05
CHRNA1-205ENST00000409542 TRBV30A0A0K0K1B3 111 aa8.47□□□□□ -1.05
CHRNA1-205ENST00000409542 M0QXV9 152 aa8.47□□□□□ -1.05
CHRNA1-205ENST00000409542 PRSS2P07478 247 aa8.47□□□□□ -1.05
CHRNA1-205ENST00000409542 SCGB1C2P0DMR2 95 aa8.47□□□□□ -1.05
CHRNA1-205ENST00000409542 PCP4P48539 62 aa8.47□□□□□ -1.05
CHRNA1-205ENST00000409542 SFTA2Q6UW10 78 aa8.47□□□□□ -1.05
CHRNA1-205ENST00000409542 SH2D6Q7Z4S9 175 aa8.47□□□□□ -1.05
CHRNA1-205ENST00000409542 HERV-K104P63124 156 aa8.46□□□□□ -1.05
CHRNA1-205ENST00000409542 COPS9Q8WXC6 57 aa8.46□□□□□ -1.05
CHRNA1-205ENST00000409542 ZNF625Q96I27 306 aaPredicted RBP8.46□□□□□ -1.05
CHRNA1-205ENST00000409542 PPDPFQ9H3Y8 114 aa8.46□□□□□ -1.05
CHRNA1-205ENST00000409542 LRCOL1A6NCL2 159 aa8.45□□□□□ -1.06
CHRNA1-205ENST00000409542 MTURNQ8N3F0 131 aa8.45□□□□□ -1.06
CHRNA1-205ENST00000409542 PRO0255Q9UI72 69 aa8.45□□□□□ -1.06
CHRNA1-205ENST00000409542 IGLV5-52A0A0A0MRZ9 124 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms