RNA–Protein interactions for RNA: ENST00000407343.3

PTPN12-202, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-202ENST00000407343 PTPN23Q9H3S7 1636 aa0.82□□□□□ -2.28
PTPN12-202ENST00000407343 PDCD11Q14690 1871 aaKnown RBP0.82□□□□□ -2.28
PTPN12-202ENST00000407343 D6R8Y8 96 aa0.82□□□□□ -2.28
PTPN12-202ENST00000407343 PLGLAQ15195 96 aa0.82□□□□□ -2.28
PTPN12-202ENST00000407343 DEFB121Q5J5C9 76 aa0.82□□□□□ -2.28
PTPN12-202ENST00000407343 C10orf113Q5VZT2 155 aa0.82□□□□□ -2.28
PTPN12-202ENST00000407343 MUSTN1Q8IVN3 82 aa0.82□□□□□ -2.28
PTPN12-202ENST00000407343 DEFB107AQ8IZN7 70 aa0.82□□□□□ -2.28
PTPN12-202ENST00000407343 UBE2D4Q9Y2X8 147 aa0.82□□□□□ -2.28
PTPN12-202ENST00000407343 JMJD1CQ15652 2540 aa0.82□□□□□ -2.28
PTPN12-202ENST00000407343 BTAF1O14981 1849 aa0.82□□□□□ -2.28
PTPN12-202ENST00000407343 NHSL1Q5SYE7 1610 aa0.82□□□□□ -2.28
PTPN12-202ENST00000407343 PPRC1Q5VV67 1664 aaKnown RBP0.81□□□□□ -2.28
PTPN12-202ENST00000407343 C1orf167Q5SNV9 1468 aa0.81□□□□□ -2.28
PTPN12-202ENST00000407343 CEBPZOSA8MTT3 80 aa0.81□□□□□ -2.28
PTPN12-202ENST00000407343 H0Y9P7 68 aa0.81□□□□□ -2.28
PTPN12-202ENST00000407343 K7EIL1 84 aa0.81□□□□□ -2.28
PTPN12-202ENST00000407343 GCHFRP30047 84 aa0.81□□□□□ -2.28
PTPN12-202ENST00000407343 SPATA8Q6RVD6 105 aa0.81□□□□□ -2.28
PTPN12-202ENST00000407343 HEPN1Q6WQI6 88 aa0.81□□□□□ -2.28
PTPN12-202ENST00000407343 TMEM263Q8WUH6 116 aaKnown RBP0.81□□□□□ -2.28
PTPN12-202ENST00000407343 MYH4Q9Y623 1939 aa0.81□□□□□ -2.28
PTPN12-202ENST00000407343 NUP188Q5SRE5 1749 aa0.81□□□□□ -2.28
PTPN12-202ENST00000407343 DNAJC13O75165 2243 aa0.8□□□□□ -2.28
PTPN12-202ENST00000407343 KNTC1P50748 2209 aa0.8□□□□□ -2.28
PTPN12-202ENST00000407343 MYO7AQ13402 2215 aa0.8□□□□□ -2.28
PTPN12-202ENST00000407343 Q6JHZ5 121 aa0.8□□□□□ -2.28
PTPN12-202ENST00000407343 C6orf201Q7Z4U5 140 aa0.8□□□□□ -2.28
PTPN12-202ENST00000407343 ZC3H13Q5T200 1668 aaKnown RBP0.8□□□□□ -2.28
PTPN12-202ENST00000407343 LRRC37A2A6NM11 1700 aa0.8□□□□□ -2.28
PTPN12-202ENST00000407343 MYO5CQ9NQX4 1742 aa0.8□□□□□ -2.28
PTPN12-202ENST00000407343 KIF20BQ96Q89 1820 aa0.8□□□□□ -2.28
PTPN12-202ENST00000407343 ATP7BP35670 1465 aa0.8□□□□□ -2.28
PTPN12-202ENST00000407343 CEP170BQ9Y4F5 1589 aaPredicted RBP0.79□□□□□ -2.28
PTPN12-202ENST00000407343 KNDC1Q76NI1 1749 aa0.79□□□□□ -2.28
PTPN12-202ENST00000407343 TRBV7-4A0A0J9YYF1 115 aa0.79□□□□□ -2.28
PTPN12-202ENST00000407343 SMIM13P0DJ93 91 aa0.79□□□□□ -2.28
PTPN12-202ENST00000407343 MAGI3Q5TCQ9 1506 aa0.79□□□□□ -2.28
PTPN12-202ENST00000407343 DUOX2Q9NRD8 1548 aa0.79□□□□□ -2.28
PTPN12-202ENST00000407343 TARBP1Q13395 1621 aaKnown RBP0.78□□□□□ -2.28
PTPN12-202ENST00000407343 MADDQ8WXG6 1647 aa0.78□□□□□ -2.28
PTPN12-202ENST00000407343 SHPRHQ149N8 1683 aa0.78□□□□□ -2.28
PTPN12-202ENST00000407343 PIN1P1O15428 100 aa0.78□□□□□ -2.28
PTPN12-202ENST00000407343 HAMPP81172 84 aa0.78□□□□□ -2.28
PTPN12-202ENST00000407343 ASXL3Q9C0F0 2248 aa0.78□□□□□ -2.28
PTPN12-202ENST00000407343 ALKQ9UM73 1620 aa0.78□□□□□ -2.29
PTPN12-202ENST00000407343 LTN1O94822 1766 aa0.78□□□□□ -2.29
PTPN12-202ENST00000407343 RGPD2P0DJD1 1756 aa0.78□□□□□ -2.29
PTPN12-202ENST00000407343 KDM3BQ7LBC6 1761 aa0.78□□□□□ -2.29
PTPN12-202ENST00000407343 ASH1LQ9NR48 2969 aaKnown RBP0.77□□□□□ -2.29
PTPN12-202ENST00000407343 AHNAK2Q8IVF2 5795 aa0.77□□□□□ -2.29
PTPN12-202ENST00000407343 TRBV6-1A0A0K0K1D8 114 aa0.77□□□□□ -2.29
PTPN12-202ENST00000407343 A0A1B0GUT8 65 aa0.77□□□□□ -2.29
PTPN12-202ENST00000407343 UMAD1C9J7I0 102 aa0.77□□□□□ -2.29
PTPN12-202ENST00000407343 GNGT1P63211 74 aa0.77□□□□□ -2.29
PTPN12-202ENST00000407343 CD163L1Q9NR16 1453 aa0.77□□□□□ -2.29
PTPN12-202ENST00000407343 SAMD9Q5K651 1589 aa0.77□□□□□ -2.29
PTPN12-202ENST00000407343 SETBP1Q9Y6X0 1596 aa0.77□□□□□ -2.29
PTPN12-202ENST00000407343 MROH1Q8NDA8 1641 aa0.77□□□□□ -2.29
PTPN12-202ENST00000407343 CRYBG1Q9Y4K1 1723 aa0.77□□□□□ -2.29
PTPN12-202ENST00000407343 CADP27708 2225 aa0.77□□□□□ -2.29
PTPN12-202ENST00000407343 FRAS1Q86XX4 4008 aa0.77□□□□□ -2.29
PTPN12-202ENST00000407343 RGPD8O14715 1765 aaPredicted RBP0.76□□□□□ -2.29
PTPN12-202ENST00000407343 RGPD5Q99666 1765 aa0.76□□□□□ -2.29
PTPN12-202ENST00000407343 C5P01031 1676 aa0.76□□□□□ -2.29
PTPN12-202ENST00000407343 ZNF831Q5JPB2 1677 aa0.76□□□□□ -2.29
PTPN12-202ENST00000407343 LRP6O75581 1613 aa0.76□□□□□ -2.29
PTPN12-202ENST00000407343 LAMC1P11047 1609 aa0.76□□□□□ -2.29
PTPN12-202ENST00000407343 USP32Q8NFA0 1604 aa0.76□□□□□ -2.29
PTPN12-202ENST00000407343 LINC00959A0A1B0GUT2 108 aa0.76□□□□□ -2.29
PTPN12-202ENST00000407343 S100A3P33764 101 aa0.76□□□□□ -2.29
PTPN12-202ENST00000407343 ATP5EP2Q5VTU8 51 aa0.76□□□□□ -2.29
PTPN12-202ENST00000407343 C10orf95Q9H7T3 257 aa0.76□□□□□ -2.29
PTPN12-202ENST00000407343 CACNA1CQ13936 2221 aa0.76□□□□□ -2.29
PTPN12-202ENST00000407343 PAPPA2Q9BXP8 1791 aa0.75□□□□□ -2.29
PTPN12-202ENST00000407343 XRN1Q8IZH2 1706 aaKnown RBP0.75□□□□□ -2.29
PTPN12-202ENST00000407343 PIK3C2BO00750 1634 aa0.75□□□□□ -2.29
PTPN12-202ENST00000407343 INO80Q9ULG1 1556 aaPredicted RBP0.75□□□□□ -2.29
PTPN12-202ENST00000407343 URB2Q14146 1524 aaKnown RBP0.75□□□□□ -2.29
PTPN12-202ENST00000407343 ASXL1Q8IXJ9 1541 aa0.75□□□□□ -2.29
PTPN12-202ENST00000407343 NKTRP30414 1462 aaKnown RBP0.75□□□□□ -2.29
PTPN12-202ENST00000407343 A0A1B0GU69 56 aa0.75□□□□□ -2.29
PTPN12-202ENST00000407343 IFI27P40305 119 aaPredicted RBP0.75□□□□□ -2.29
PTPN12-202ENST00000407343 SSBP3-AS1Q7Z2R9 100 aa0.75□□□□□ -2.29
PTPN12-202ENST00000407343 ZNF462Q96JM2 2506 aa0.75□□□□□ -2.29
PTPN12-202ENST00000407343 ARFGEF2Q9Y6D5 1785 aa0.75□□□□□ -2.29
PTPN12-202ENST00000407343 NAV3Q8IVL0 2385 aa0.75□□□□□ -2.29
PTPN12-202ENST00000407343 EFCAB5A4FU69 1503 aa0.74□□□□□ -2.29
PTPN12-202ENST00000407343 SLIT1O75093 1534 aa0.74□□□□□ -2.29
PTPN12-202ENST00000407343 A0A087WXM4 84 aa0.74□□□□□ -2.29
PTPN12-202ENST00000407343 TRAV21A0A0B4J279 112 aa0.74□□□□□ -2.29
PTPN12-202ENST00000407343 HMGA1P17096 107 aaKnown RBP0.74□□□□□ -2.29
PTPN12-202ENST00000407343 FXYD6P3P58550 94 aa0.74□□□□□ -2.29
PTPN12-202ENST00000407343 KRTAP21-1Q3LI58 79 aa0.74□□□□□ -2.29
PTPN12-202ENST00000407343 UBE2DNLQ8IWF7 75 aa0.74□□□□□ -2.29
PTPN12-202ENST00000407343 HILPDAQ9Y5L2 63 aa0.74□□□□□ -2.29
PTPN12-202ENST00000407343 SCN11AQ9UI33 1791 aa0.74□□□□□ -2.29
PTPN12-202ENST00000407343 LRRC7Q96NW7 1537 aa0.74□□□□□ -2.29
PTPN12-202ENST00000407343 TULP4Q9NRJ4 1543 aa0.74□□□□□ -2.29
PTPN12-202ENST00000407343 RGPD1P0DJD0 1748 aa0.73□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms