RNA–Protein interactions for RNA: ENST00000407298.7

APOBEC3B-204, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene APOBEC3B, Length 1,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-204ENST00000407298 TGIF2-C20orf24A0A0A6YYL0 155 aa7.38□□□□□ -1.23
APOBEC3B-204ENST00000407298 NDUFA1O15239 70 aa7.38□□□□□ -1.23
APOBEC3B-204ENST00000407298 FAM19A3Q7Z5A8 133 aa7.38□□□□□ -1.23
APOBEC3B-204ENST00000407298 TOMM6Q96B49 74 aa7.38□□□□□ -1.23
APOBEC3B-204ENST00000407298 KRTAP1-4P0C5Y4 121 aa7.37□□□□□ -1.23
APOBEC3B-204ENST00000407298 TLX1NBP0CAT3 122 aa7.37□□□□□ -1.23
APOBEC3B-204ENST00000407298 UBE2BP63146 152 aa7.37□□□□□ -1.23
APOBEC3B-204ENST00000407298 TIMM17AQ99595 171 aa7.37□□□□□ -1.23
APOBEC3B-204ENST00000407298 MRPL18Q9H0U6 180 aaKnown RBP7.37□□□□□ -1.23
APOBEC3B-204ENST00000407298 COX19Q49B96 90 aa7.36□□□□□ -1.23
APOBEC3B-204ENST00000407298 UNQ6190/PRO20217Q6UXQ8 127 aa7.36□□□□□ -1.23
APOBEC3B-204ENST00000407298 Q6ZN92 141 aa7.36□□□□□ -1.23
APOBEC3B-204ENST00000407298 FAM19A5Q7Z5A7 132 aaPredicted RBP7.36□□□□□ -1.23
APOBEC3B-204ENST00000407298 C2orf88Q9BSF0 95 aa7.36□□□□□ -1.23
APOBEC3B-204ENST00000407298 C6orf48Q9UBA6 75 aa7.36□□□□□ -1.23
APOBEC3B-204ENST00000407298 APOC3P02656 99 aa7.35□□□□□ -1.23
APOBEC3B-204ENST00000407298 LINC01561Q8N1V8 128 aa7.35□□□□□ -1.23
APOBEC3B-204ENST00000407298 URB1-AS1Q96HZ7 61 aa7.35□□□□□ -1.23
APOBEC3B-204ENST00000407298 KRTAP4-8Q9BYQ9 185 aa7.35□□□□□ -1.23
APOBEC3B-204ENST00000407298 VCX2Q9H322 139 aa7.35□□□□□ -1.23
APOBEC3B-204ENST00000407298 A0A096LNJ9 63 aa7.34□□□□□ -1.23
APOBEC3B-204ENST00000407298 FAM168BA1KXE4 195 aa7.34□□□□□ -1.23
APOBEC3B-204ENST00000407298 GHRHP01286 108 aa7.34□□□□□ -1.23
APOBEC3B-204ENST00000407298 FABP9Q0Z7S8 132 aa7.34□□□□□ -1.23
APOBEC3B-204ENST00000407298 C2orf82Q6UX34 121 aa7.34□□□□□ -1.23
APOBEC3B-204ENST00000407298 ERASQ7Z444 233 aa7.34□□□□□ -1.23
APOBEC3B-204ENST00000407298 YPEL4Q96NS1 127 aa7.34□□□□□ -1.23
APOBEC3B-204ENST00000407298 KRTAP9-6A0A140TA67 174 aa7.33□□□□□ -1.24
APOBEC3B-204ENST00000407298 M0QXV9 152 aa7.33□□□□□ -1.24
APOBEC3B-204ENST00000407298 GAGE2EQ4V326 116 aa7.33□□□□□ -1.24
APOBEC3B-204ENST00000407298 KRTAP11-1Q8IUC1 163 aa7.33□□□□□ -1.24
APOBEC3B-204ENST00000407298 SVBPQ8N300 66 aa7.33□□□□□ -1.24
APOBEC3B-204ENST00000407298 GAGE2DQ9UEU5 116 aa7.33□□□□□ -1.24
APOBEC3B-204ENST00000407298 CDKN2A-AS1Q9UH64 79 aa7.33□□□□□ -1.24
APOBEC3B-204ENST00000407298 KRTAP7-1Q8IUC3 87 aa7.32□□□□□ -1.24
APOBEC3B-204ENST00000407298 C18orf32Q8TCD1 76 aa7.32□□□□□ -1.24
APOBEC3B-204ENST00000407298 SCGB3A1Q96QR1 104 aa7.32□□□□□ -1.24
APOBEC3B-204ENST00000407298 FAT4Q6V0I7 4981 aa7.32□□□□□ -1.24
APOBEC3B-204ENST00000407298 ZNF861PO60384 105 aa7.31□□□□□ -1.24
APOBEC3B-204ENST00000407298 SNAPINO95295 136 aa7.31□□□□□ -1.24
APOBEC3B-204ENST00000407298 G0S2P27469 103 aa7.31□□□□□ -1.24
APOBEC3B-204ENST00000407298 HERVK_113P63121 156 aa7.31□□□□□ -1.24
APOBEC3B-204ENST00000407298 PAPPA-AS1Q5QFB9 102 aa7.31□□□□□ -1.24
APOBEC3B-204ENST00000407298 IGLV5-45A0A087WSX0 123 aa7.3□□□□□ -1.24
APOBEC3B-204ENST00000407298 TRBV30A0A0K0K1B3 111 aa7.3□□□□□ -1.24
APOBEC3B-204ENST00000407298 TSPAN13O95857 204 aa7.3□□□□□ -1.24
APOBEC3B-204ENST00000407298 FA2HQ7L5A8 372 aa7.3□□□□□ -1.24
APOBEC3B-204ENST00000407298 Q8IZM0 81 aa7.3□□□□□ -1.24
APOBEC3B-204ENST00000407298 TRAPPC1Q9Y5R8 145 aa7.3□□□□□ -1.24
APOBEC3B-204ENST00000407298 SMIM1B2RUZ4 78 aa7.29□□□□□ -1.24
APOBEC3B-204ENST00000407298 NUPR1O60356 82 aa7.29□□□□□ -1.24
APOBEC3B-204ENST00000407298 NDUFA5Q16718 116 aa7.29□□□□□ -1.24
APOBEC3B-204ENST00000407298 PACRGQ96M98 296 aaPredicted RBP7.29□□□□□ -1.24
APOBEC3B-204ENST00000407298 CST9LQ9H4G1 147 aa7.29□□□□□ -1.24
APOBEC3B-204ENST00000407298 TINCRA0A1B0GVN0 87 aa7.28□□□□□ -1.24
APOBEC3B-204ENST00000407298 LINC01549A6NIU2 74 aa7.28□□□□□ -1.24
APOBEC3B-204ENST00000407298 NDUFC2-KCTD14E9PQ53 114 aa7.28□□□□□ -1.24
APOBEC3B-204ENST00000407298 SEC11AP67812 179 aa7.28□□□□□ -1.24
APOBEC3B-204ENST00000407298 C9orf129Q5T035 196 aaKnown RBP7.28□□□□□ -1.24
APOBEC3B-204ENST00000407298 GEMIN7Q9H840 131 aaKnown RBP7.28□□□□□ -1.24
APOBEC3B-204ENST00000407298 SMCO4Q9NRQ5 59 aa7.28□□□□□ -1.24
APOBEC3B-204ENST00000407298 TOMM7Q9P0U1 55 aa7.28□□□□□ -1.24
APOBEC3B-204ENST00000407298 PMVKQ15126 192 aa7.27□□□□□ -1.25
APOBEC3B-204ENST00000407298 PMCHL1Q16048 86 aa7.27□□□□□ -1.25
APOBEC3B-204ENST00000407298 LBHQ53QV2 105 aaPredicted RBP7.27□□□□□ -1.25
APOBEC3B-204ENST00000407298 LINC00469Q8N7U9 141 aa7.27□□□□□ -1.25
APOBEC3B-204ENST00000407298 CRYGAP11844 174 aa7.26□□□□□ -1.25
APOBEC3B-204ENST00000407298 PDZD11Q5EBL8 140 aa7.26□□□□□ -1.25
APOBEC3B-204ENST00000407298 CBLN2Q8IUK8 224 aa7.26□□□□□ -1.25
APOBEC3B-204ENST00000407298 TYMSOSQ8TAI1 123 aa7.26□□□□□ -1.25
APOBEC3B-204ENST00000407298 HBDP02042 147 aa7.25□□□□□ -1.25
APOBEC3B-204ENST00000407298 PRSS2P07478 247 aa7.25□□□□□ -1.25
APOBEC3B-204ENST00000407298 LINC00614P0C842 121 aa7.25□□□□□ -1.25
APOBEC3B-204ENST00000407298 IGLC3P0DOY3 106 aa7.25□□□□□ -1.25
APOBEC3B-204ENST00000407298 RPL28P46779 137 aaKnown RBP7.25□□□□□ -1.25
APOBEC3B-204ENST00000407298 F8VRH5 84 aa7.24□□□□□ -1.25
APOBEC3B-204ENST00000407298 SPINK8P0C7L1 97 aa7.24□□□□□ -1.25
APOBEC3B-204ENST00000407298 CKS1BP61024 79 aa7.24□□□□□ -1.25
APOBEC3B-204ENST00000407298 C6orf226Q5I0X4 101 aa7.24□□□□□ -1.25
APOBEC3B-204ENST00000407298 SLC7A5P1Q8MH63 180 aa7.23□□□□□ -1.25
APOBEC3B-204ENST00000407298 COX7B2Q8TF08 81 aa7.23□□□□□ -1.25
APOBEC3B-204ENST00000407298 C22orf24Q9Y442 160 aa7.23□□□□□ -1.25
APOBEC3B-204ENST00000407298 IGLV5-39A0A0G2JS06 123 aa7.22□□□□□ -1.25
APOBEC3B-204ENST00000407298 ZNF22P17026 224 aaPredicted RBP7.22□□□□□ -1.25
APOBEC3B-204ENST00000407298 CXCL5P42830 114 aa7.22□□□□□ -1.25
APOBEC3B-204ENST00000407298 CDIP1Q9H305 208 aa7.22□□□□□ -1.25
APOBEC3B-204ENST00000407298 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.21□□□□□ -1.26
APOBEC3B-204ENST00000407298 XAGE1AQ9HD64 81 aa7.21□□□□□ -1.26
APOBEC3B-204ENST00000407298 TP73-AS1Q9UF72 201 aa7.21□□□□□ -1.26
APOBEC3B-204ENST00000407298 A0A087X002 238 aa7.2□□□□□ -1.26
APOBEC3B-204ENST00000407298 C11orf86A6NJI1 115 aa7.2□□□□□ -1.26
APOBEC3B-204ENST00000407298 BCE1O60756 84 aa7.2□□□□□ -1.26
APOBEC3B-204ENST00000407298 RAB5BP61020 215 aa7.2□□□□□ -1.26
APOBEC3B-204ENST00000407298 NDUFA6P56556 154 aa7.19□□□□□ -1.26
APOBEC3B-204ENST00000407298 LINC00310P59036 64 aa7.19□□□□□ -1.26
APOBEC3B-204ENST00000407298 CTAG1AP78358 180 aa7.19□□□□□ -1.26
APOBEC3B-204ENST00000407298 TPRXLQ17RH7 258 aa7.19□□□□□ -1.26
APOBEC3B-204ENST00000407298 MRPL55Q7Z7F7 128 aaKnown RBP7.19□□□□□ -1.26
APOBEC3B-204ENST00000407298 CHCHD1Q96BP2 118 aaKnown RBP7.19□□□□□ -1.26
APOBEC3B-204ENST00000407298 H3BRM9 83 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms