RNA–Protein interactions for RNA: ENST00000400564.5

SAMSN1-202, Transcript of SAM domain, SH3 domain and nuclear localization signals 1, humanhuman

TSL 1 (best) BASIC

Gene SAMSN1, Length 1,382 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMSN1-202ENST00000400564 ABCA12Q86UK0 2595 aa0.73□□□□□ -2.29
SAMSN1-202ENST00000400564 ZNF292O60281 2723 aa0.73□□□□□ -2.29
SAMSN1-202ENST00000400564 CSMD3Q7Z407 3707 aa0.73□□□□□ -2.29
SAMSN1-202ENST00000400564 TRBV7-4A0A0J9YYF1 115 aa0.73□□□□□ -2.29
SAMSN1-202ENST00000400564 H0Y9P7 68 aa0.73□□□□□ -2.29
SAMSN1-202ENST00000400564 I3L2K1 104 aa0.73□□□□□ -2.29
SAMSN1-202ENST00000400564 LEPROTL1O95214 131 aa0.73□□□□□ -2.29
SAMSN1-202ENST00000400564 PSENENQ9NZ42 101 aa0.73□□□□□ -2.29
SAMSN1-202ENST00000400564 EDC4Q6P2E9 1401 aaKnown RBP0.73□□□□□ -2.29
SAMSN1-202ENST00000400564 KNDC1Q76NI1 1749 aa0.73□□□□□ -2.29
SAMSN1-202ENST00000400564 UBR1Q8IWV7 1749 aa0.73□□□□□ -2.29
SAMSN1-202ENST00000400564 ANKRD36A6QL64 1941 aa0.72□□□□□ -2.29
SAMSN1-202ENST00000400564 A0A1B0GU69 56 aa0.72□□□□□ -2.29
SAMSN1-202ENST00000400564 LINC00959A0A1B0GUT2 108 aa0.72□□□□□ -2.29
SAMSN1-202ENST00000400564 D6R8Y8 96 aa0.72□□□□□ -2.29
SAMSN1-202ENST00000400564 SMIM11AP58511 58 aa0.72□□□□□ -2.29
SAMSN1-202ENST00000400564 MUSTN1Q8IVN3 82 aa0.72□□□□□ -2.29
SAMSN1-202ENST00000400564 TNCP24821 2201 aa0.72□□□□□ -2.29
SAMSN1-202ENST00000400564 ATP10BO94823 1461 aa0.72□□□□□ -2.29
SAMSN1-202ENST00000400564 EPRSP07814 1512 aaKnown RBP0.72□□□□□ -2.29
SAMSN1-202ENST00000400564 SCRIBQ14160 1630 aa0.72□□□□□ -2.29
SAMSN1-202ENST00000400564 PPLO60437 1756 aa0.72□□□□□ -2.29
SAMSN1-202ENST00000400564 K7EP34 96 aa0.71□□□□□ -2.3
SAMSN1-202ENST00000400564 PEA15Q15121 130 aa0.71□□□□□ -2.3
SAMSN1-202ENST00000400564 HMGN3Q15651 99 aa0.71□□□□□ -2.3
SAMSN1-202ENST00000400564 C6orf201Q7Z4U5 140 aa0.71□□□□□ -2.3
SAMSN1-202ENST00000400564 CEP162Q5TB80 1403 aa0.71□□□□□ -2.3
SAMSN1-202ENST00000400564 FANCAO15360 1455 aa0.71□□□□□ -2.3
SAMSN1-202ENST00000400564 PAPPAQ13219 1627 aa0.71□□□□□ -2.3
SAMSN1-202ENST00000400564 USF3Q68DE3 2245 aa0.71□□□□□ -2.3
SAMSN1-202ENST00000400564 XRN1Q8IZH2 1706 aaKnown RBP0.71□□□□□ -2.3
SAMSN1-202ENST00000400564 ABCC3O15438 1527 aa0.71□□□□□ -2.3
SAMSN1-202ENST00000400564 TDRG1Q3Y452 100 aa0.7□□□□□ -2.3
SAMSN1-202ENST00000400564 Q5BKY6 102 aa0.7□□□□□ -2.3
SAMSN1-202ENST00000400564 PAPPA2Q9BXP8 1791 aa0.7□□□□□ -2.3
SAMSN1-202ENST00000400564 BIVM-ERCC5R4GMW8 1640 aa0.7□□□□□ -2.3
SAMSN1-202ENST00000400564 CYB5AP00167 134 aa0.7□□□□□ -2.3
SAMSN1-202ENST00000400564 CFDP00746 253 aaPredicted RBP0.7□□□□□ -2.3
SAMSN1-202ENST00000400564 S100A16Q96FQ6 103 aaKnown RBP0.7□□□□□ -2.3
SAMSN1-202ENST00000400564 TPRP12270 2363 aaKnown RBP0.69□□□□□ -2.3
SAMSN1-202ENST00000400564 URB1O60287 2271 aaKnown RBP0.69□□□□□ -2.3
SAMSN1-202ENST00000400564 SHPRHQ149N8 1683 aa0.68□□□□□ -2.3
SAMSN1-202ENST00000400564 NHSL1Q5SYE7 1610 aa0.68□□□□□ -2.3
SAMSN1-202ENST00000400564 TULP4Q9NRJ4 1543 aa0.68□□□□□ -2.3
SAMSN1-202ENST00000400564 IQSEC2Q5JU85 1478 aa0.68□□□□□ -2.3
SAMSN1-202ENST00000400564 SPINK1P00995 79 aa0.68□□□□□ -2.3
SAMSN1-202ENST00000400564 ALKAL2Q6UX46 152 aa0.68□□□□□ -2.3
SAMSN1-202ENST00000400564 PIEZO2Q9H5I5 2752 aa0.67□□□□□ -2.3
SAMSN1-202ENST00000400564 PLIN4Q96Q06 1357 aa0.67□□□□□ -2.3
SAMSN1-202ENST00000400564 PIEZO1Q92508 2521 aa0.67□□□□□ -2.3
SAMSN1-202ENST00000400564 SETBP1Q9Y6X0 1596 aa0.67□□□□□ -2.3
SAMSN1-202ENST00000400564 HMGN2P05204 90 aaKnown RBP0.67□□□□□ -2.3
SAMSN1-202ENST00000400564 A0A0G2JMZ2 1700 aa0.66□□□□□ -2.3
SAMSN1-202ENST00000400564 DEFB123Q8N688 67 aa0.66□□□□□ -2.3
SAMSN1-202ENST00000400564 PTPRZ1P23471 2315 aaPredicted RBP0.66□□□□□ -2.3
SAMSN1-202ENST00000400564 TARBP1Q13395 1621 aaKnown RBP0.65□□□□□ -2.3
SAMSN1-202ENST00000400564 MYO3AQ8NEV4 1616 aa0.65□□□□□ -2.3
SAMSN1-202ENST00000400564 WFDC2Q14508 124 aa0.65□□□□□ -2.31
SAMSN1-202ENST00000400564 NEXMIFQ5QGS0 1516 aa0.64□□□□□ -2.31
SAMSN1-202ENST00000400564 OTOGQ6ZRI0 2925 aa0.64□□□□□ -2.31
SAMSN1-202ENST00000400564 BSNQ9UPA5 3926 aa0.64□□□□□ -2.31
SAMSN1-202ENST00000400564 CRYBG1Q9Y4K1 1723 aa0.64□□□□□ -2.31
SAMSN1-202ENST00000400564 CUX1P39880 1505 aa0.64□□□□□ -2.31
SAMSN1-202ENST00000400564 C5P01031 1676 aa0.64□□□□□ -2.31
SAMSN1-202ENST00000400564 COX6B1P14854 86 aa0.63□□□□□ -2.31
SAMSN1-202ENST00000400564 SPTBN1Q01082 2364 aaKnown RBP0.62□□□□□ -2.31
SAMSN1-202ENST00000400564 K7EQZ3 153 aa0.62□□□□□ -2.31
SAMSN1-202ENST00000400564 IGLC2P0DOY2 106 aa0.62□□□□□ -2.31
SAMSN1-202ENST00000400564 IGLC3P0DOY3 106 aa0.62□□□□□ -2.31
SAMSN1-202ENST00000400564 USMG5Q96IX5 58 aa0.62□□□□□ -2.31
SAMSN1-202ENST00000400564 RABAC1Q9UI14 185 aa0.62□□□□□ -2.31
SAMSN1-202ENST00000400564 IGF2RP11717 2491 aa0.62□□□□□ -2.31
SAMSN1-202ENST00000400564 MUC5ACP98088 5654 aa0.62□□□□□ -2.31
SAMSN1-202ENST00000400564 DSTQ03001 7570 aaKnown RBP0.62□□□□□ -2.31
SAMSN1-202ENST00000400564 GVINP1Q7Z2Y8 2422 aa0.61□□□□□ -2.31
SAMSN1-202ENST00000400564 USP24Q9UPU5 2620 aa0.61□□□□□ -2.31
SAMSN1-202ENST00000400564 SNRPFP62306 86 aaKnown RBP0.61□□□□□ -2.31
SAMSN1-202ENST00000400564 NMSQ5H8A3 153 aa0.61□□□□□ -2.31
SAMSN1-202ENST00000400564 UBE2D4Q9Y2X8 147 aa0.61□□□□□ -2.31
SAMSN1-202ENST00000400564 PTPRQQ9UMZ3 2332 aa0.61□□□□□ -2.31
SAMSN1-202ENST00000400564 ARHGAP35Q9NRY4 1499 aa0.61□□□□□ -2.31
SAMSN1-202ENST00000400564 UACAQ9BZF9 1416 aa0.61□□□□□ -2.31
SAMSN1-202ENST00000400564 IQCF6A8MYZ5 107 aa0.6□□□□□ -2.31
SAMSN1-202ENST00000400564 DEFB109BQ30KR1 87 aa0.6□□□□□ -2.31
SAMSN1-202ENST00000400564 Q5VSD8 79 aa0.6□□□□□ -2.31
SAMSN1-202ENST00000400564 CCDC141Q6ZP82 1450 aa0.6□□□□□ -2.31
SAMSN1-202ENST00000400564 NEBP20929 6669 aa0.6□□□□□ -2.31
SAMSN1-202ENST00000400564 SLIT1O75093 1534 aa0.6□□□□□ -2.31
SAMSN1-202ENST00000400564 PCLOQ9Y6V0 5065 aa0.6□□□□□ -2.31
SAMSN1-202ENST00000400564 FAT2Q9NYQ8 4349 aa0.6□□□□□ -2.31
SAMSN1-202ENST00000400564 SPRR1AP35321 89 aa0.59□□□□□ -2.31
SAMSN1-202ENST00000400564 PLGLAQ15195 96 aa0.59□□□□□ -2.31
SAMSN1-202ENST00000400564 DEFB112Q30KQ8 113 aa0.59□□□□□ -2.31
SAMSN1-202ENST00000400564 SAMD9Q5K651 1589 aa0.59□□□□□ -2.31
SAMSN1-202ENST00000400564 AKAP6Q13023 2319 aa0.59□□□□□ -2.32
SAMSN1-202ENST00000400564 KIF14Q15058 1648 aa0.59□□□□□ -2.32
SAMSN1-202ENST00000400564 CCDC18Q5T9S5 1454 aa0.59□□□□□ -2.32
SAMSN1-202ENST00000400564 COX8AP10176 69 aa0.58□□□□□ -2.32
SAMSN1-202ENST00000400564 KRTAP21-1Q3LI58 79 aa0.58□□□□□ -2.32
SAMSN1-202ENST00000400564 CRIPTQ9P021 101 aa0.58□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms