RNA–Protein interactions for RNA: ENST00000398005.3

HMGN2P39-201, Transcript of high mobility group nucleosomal binding domain 2 pseudogene 39, humanhuman

BASIC

Gene HMGN2P39, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN2P39-201ENST00000398005 ATP7BP35670 1465 aa0.77□□□□□ -2.29
HMGN2P39-201ENST00000398005 DUOX2Q9NRD8 1548 aa0.77□□□□□ -2.29
HMGN2P39-201ENST00000398005 ADAMTS12P58397 1594 aa0.77□□□□□ -2.29
HMGN2P39-201ENST00000398005 LRP6O75581 1613 aa0.77□□□□□ -2.29
HMGN2P39-201ENST00000398005 TARBP1Q13395 1621 aaKnown RBP0.77□□□□□ -2.29
HMGN2P39-201ENST00000398005 IQGAP3Q86VI3 1631 aa0.77□□□□□ -2.29
HMGN2P39-201ENST00000398005 SHPRHQ149N8 1683 aa0.77□□□□□ -2.29
HMGN2P39-201ENST00000398005 PRRC2BQ5JSZ5 2229 aaKnown RBP0.77□□□□□ -2.29
HMGN2P39-201ENST00000398005 HMCN1Q96RW7 5635 aa0.76□□□□□ -2.29
HMGN2P39-201ENST00000398005 SCN11AQ9UI33 1791 aa0.76□□□□□ -2.29
HMGN2P39-201ENST00000398005 XRN1Q8IZH2 1706 aaKnown RBP0.76□□□□□ -2.29
HMGN2P39-201ENST00000398005 MYO5CQ9NQX4 1742 aa0.76□□□□□ -2.29
HMGN2P39-201ENST00000398005 ZC3H13Q5T200 1668 aaKnown RBP0.76□□□□□ -2.29
HMGN2P39-201ENST00000398005 URB2Q14146 1524 aaKnown RBP0.76□□□□□ -2.29
HMGN2P39-201ENST00000398005 TRBV7-4A0A0J9YYF1 115 aa0.76□□□□□ -2.29
HMGN2P39-201ENST00000398005 H3BVH4 76 aa0.76□□□□□ -2.29
HMGN2P39-201ENST00000398005 NDUFB1O75438 58 aa0.76□□□□□ -2.29
HMGN2P39-201ENST00000398005 WFDC9Q8NEX5 89 aa0.76□□□□□ -2.29
HMGN2P39-201ENST00000398005 MYO7BQ6PIF6 2116 aa0.76□□□□□ -2.29
HMGN2P39-201ENST00000398005 RGPD8O14715 1765 aaPredicted RBP0.75□□□□□ -2.29
HMGN2P39-201ENST00000398005 RGPD5Q99666 1765 aa0.75□□□□□ -2.29
HMGN2P39-201ENST00000398005 ALKQ9UM73 1620 aa0.75□□□□□ -2.29
HMGN2P39-201ENST00000398005 SAMD9Q5K651 1589 aa0.75□□□□□ -2.29
HMGN2P39-201ENST00000398005 NKTRP30414 1462 aaKnown RBP0.75□□□□□ -2.29
HMGN2P39-201ENST00000398005 TRAV21A0A0B4J279 112 aa0.75□□□□□ -2.29
HMGN2P39-201ENST00000398005 A0A0D9SFI3 127 aa0.75□□□□□ -2.29
HMGN2P39-201ENST00000398005 ARL14EPLP0DKL9 152 aa0.75□□□□□ -2.29
HMGN2P39-201ENST00000398005 KRTAP21-3Q3LHN1 58 aa0.75□□□□□ -2.29
HMGN2P39-201ENST00000398005 GAFA1Q96PS6 74 aa0.75□□□□□ -2.29
HMGN2P39-201ENST00000398005 KDM3BQ7LBC6 1761 aa0.75□□□□□ -2.29
HMGN2P39-201ENST00000398005 KIAA0556O60303 1618 aa0.75□□□□□ -2.29
HMGN2P39-201ENST00000398005 NHSL1Q5SYE7 1610 aa0.75□□□□□ -2.29
HMGN2P39-201ENST00000398005 LRRC7Q96NW7 1537 aa0.74□□□□□ -2.29
HMGN2P39-201ENST00000398005 NCOA6Q14686 2063 aaPredicted RBP0.74□□□□□ -2.29
HMGN2P39-201ENST00000398005 LINC00959A0A1B0GUT2 108 aa0.74□□□□□ -2.29
HMGN2P39-201ENST00000398005 S100ZQ8WXG8 99 aa0.74□□□□□ -2.29
HMGN2P39-201ENST00000398005 LTN1O94822 1766 aa0.74□□□□□ -2.29
HMGN2P39-201ENST00000398005 PAPPA2Q9BXP8 1791 aa0.74□□□□□ -2.29
HMGN2P39-201ENST00000398005 PKD1L3Q7Z443 1732 aa0.74□□□□□ -2.29
HMGN2P39-201ENST00000398005 PIK3C2BO00750 1634 aa0.74□□□□□ -2.29
HMGN2P39-201ENST00000398005 MROH1Q8NDA8 1641 aa0.74□□□□□ -2.29
HMGN2P39-201ENST00000398005 FBN1P35555 2871 aaKnown RBP0.74□□□□□ -2.29
HMGN2P39-201ENST00000398005 RGPD2P0DJD1 1756 aa0.73□□□□□ -2.29
HMGN2P39-201ENST00000398005 A0A0G2JMZ2 1700 aa0.73□□□□□ -2.29
HMGN2P39-201ENST00000398005 TP53AIP1Q9HCN2 124 aa0.73□□□□□ -2.29
HMGN2P39-201ENST00000398005 GNG13Q9P2W3 67 aa0.73□□□□□ -2.29
HMGN2P39-201ENST00000398005 HILPDAQ9Y5L2 63 aa0.73□□□□□ -2.29
HMGN2P39-201ENST00000398005 MAGI3Q5TCQ9 1506 aa0.73□□□□□ -2.29
HMGN2P39-201ENST00000398005 SDK1Q7Z5N4 2213 aa0.72□□□□□ -2.29
HMGN2P39-201ENST00000398005 TECTAO75443 2155 aa0.72□□□□□ -2.29
HMGN2P39-201ENST00000398005 SETBP1Q9Y6X0 1596 aa0.72□□□□□ -2.29
HMGN2P39-201ENST00000398005 FXYD6-FXYD2A0A087WZ82 144 aa0.72□□□□□ -2.29
HMGN2P39-201ENST00000398005 A0A0D9SG42 100 aa0.72□□□□□ -2.29
HMGN2P39-201ENST00000398005 SPTY2D1-AS1A0A0U1RR47 76 aa0.72□□□□□ -2.29
HMGN2P39-201ENST00000398005 IFI6P09912 130 aa0.72□□□□□ -2.29
HMGN2P39-201ENST00000398005 COX8AP10176 69 aa0.72□□□□□ -2.29
HMGN2P39-201ENST00000398005 COX7BP24311 80 aa0.72□□□□□ -2.29
HMGN2P39-201ENST00000398005 RPL38P63173 70 aaKnown RBP0.72□□□□□ -2.29
HMGN2P39-201ENST00000398005 COX6A2Q02221 97 aa0.72□□□□□ -2.29
HMGN2P39-201ENST00000398005 PIGYQ3MUY2 71 aa0.72□□□□□ -2.29
HMGN2P39-201ENST00000398005 KRTAP5-7Q6L8G8 165 aa0.72□□□□□ -2.29
HMGN2P39-201ENST00000398005 MED13LQ71F56 2210 aa0.72□□□□□ -2.29
HMGN2P39-201ENST00000398005 HFM1A2PYH4 1435 aa0.72□□□□□ -2.29
HMGN2P39-201ENST00000398005 MADDQ8WXG6 1647 aa0.71□□□□□ -2.3
HMGN2P39-201ENST00000398005 INO80Q9ULG1 1556 aaPredicted RBP0.71□□□□□ -2.3
HMGN2P39-201ENST00000398005 CEP170BQ9Y4F5 1589 aaPredicted RBP0.71□□□□□ -2.3
HMGN2P39-201ENST00000398005 EFCAB5A4FU69 1503 aa0.71□□□□□ -2.3
HMGN2P39-201ENST00000398005 A0A087WWC5 75 aa0.71□□□□□ -2.3
HMGN2P39-201ENST00000398005 KRTAP10-4P60372 401 aaPredicted RBP0.71□□□□□ -2.3
HMGN2P39-201ENST00000398005 ATXN8Q156A1 80 aa0.71□□□□□ -2.3
HMGN2P39-201ENST00000398005 NREPQ16612 68 aa0.71□□□□□ -2.3
HMGN2P39-201ENST00000398005 CNFNQ9BYD5 112 aa0.71□□□□□ -2.3
HMGN2P39-201ENST00000398005 C10orf95Q9H7T3 257 aa0.71□□□□□ -2.3
HMGN2P39-201ENST00000398005 PRO0255Q9UI72 69 aa0.71□□□□□ -2.3
HMGN2P39-201ENST00000398005 PLXNB2O15031 1838 aa0.71□□□□□ -2.3
HMGN2P39-201ENST00000398005 F5P12259 2224 aa0.7□□□□□ -2.3
HMGN2P39-201ENST00000398005 ASCC3Q8N3C0 2202 aaKnown RBP0.7□□□□□ -2.3
HMGN2P39-201ENST00000398005 ARFGEF2Q9Y6D5 1785 aa0.7□□□□□ -2.3
HMGN2P39-201ENST00000398005 FLG2Q5D862 2391 aaPredicted RBP0.7□□□□□ -2.3
HMGN2P39-201ENST00000398005 ASXL1Q8IXJ9 1541 aa0.7□□□□□ -2.3
HMGN2P39-201ENST00000398005 TULP4Q9NRJ4 1543 aa0.7□□□□□ -2.3
HMGN2P39-201ENST00000398005 RGPD1P0DJD0 1748 aa0.7□□□□□ -2.3
HMGN2P39-201ENST00000398005 USMG5Q96IX5 58 aa0.7□□□□□ -2.3
HMGN2P39-201ENST00000398005 CRIPTQ9P021 101 aa0.7□□□□□ -2.3
HMGN2P39-201ENST00000398005 LAMC1P11047 1609 aa0.7□□□□□ -2.3
HMGN2P39-201ENST00000398005 CNTRLQ7Z7A1 2325 aa0.7□□□□□ -2.3
HMGN2P39-201ENST00000398005 ANKRD36A6QL64 1941 aa0.7□□□□□ -2.3
HMGN2P39-201ENST00000398005 ABCA1O95477 2261 aa0.69□□□□□ -2.3
HMGN2P39-201ENST00000398005 ZFHX3Q15911 3703 aa0.69□□□□□ -2.3
HMGN2P39-201ENST00000398005 LRRC37AA6NMS7 1700 aa0.69□□□□□ -2.3
HMGN2P39-201ENST00000398005 SLIT1O75093 1534 aa0.69□□□□□ -2.3
HMGN2P39-201ENST00000398005 SORL1Q92673 2214 aa0.69□□□□□ -2.3
HMGN2P39-201ENST00000398005 PAPPAQ13219 1627 aa0.69□□□□□ -2.3
HMGN2P39-201ENST00000398005 USP32Q8NFA0 1604 aa0.69□□□□□ -2.3
HMGN2P39-201ENST00000398005 RP1L1Q8IWN7 2480 aaPredicted RBP0.69□□□□□ -2.3
HMGN2P39-201ENST00000398005 I3L2K1 104 aa0.69□□□□□ -2.3
HMGN2P39-201ENST00000398005 Q8IZM0 81 aa0.69□□□□□ -2.3
HMGN2P39-201ENST00000398005 FAM103A1Q9BTL3 118 aaKnown RBP0.69□□□□□ -2.3
HMGN2P39-201ENST00000398005 LMTK2Q8IWU2 1503 aa0.69□□□□□ -2.3
HMGN2P39-201ENST00000398005 ZNF831Q5JPB2 1677 aa0.69□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms