RNA–Protein interactions for RNA: ENST00000395794.2

CXCL12-205, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 1,052 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-205ENST00000395794 TOMM6Q96B49 74 aa8.52□□□□□ -1.05
CXCL12-205ENST00000395794 SCGB3A1Q96QR1 104 aa8.52□□□□□ -1.05
CXCL12-205ENST00000395794 TOMM7Q9P0U1 55 aa8.52□□□□□ -1.05
CXCL12-205ENST00000395794 C2orf82Q6UX34 121 aa8.51□□□□□ -1.05
CXCL12-205ENST00000395794 PHF5AQ7RTV0 110 aaKnown RBP8.51□□□□□ -1.05
CXCL12-205ENST00000395794 ERASQ7Z444 233 aa8.51□□□□□ -1.05
CXCL12-205ENST00000395794 LINC01600Q96MT4 127 aa8.51□□□□□ -1.05
CXCL12-205ENST00000395794 KRTAP9-9Q9BYP9 154 aa8.51□□□□□ -1.05
CXCL12-205ENST00000395794 KRTAP9-4Q9BYQ2 154 aa8.51□□□□□ -1.05
CXCL12-205ENST00000395794 HMCN2Q8NDA2 5059 aa8.5□□□□□ -1.05
CXCL12-205ENST00000395794 NDUFC2-KCTD14E9PQ53 114 aa8.5□□□□□ -1.05
CXCL12-205ENST00000395794 RHEBQ15382 184 aa8.5□□□□□ -1.05
CXCL12-205ENST00000395794 C1orf137Q5JT78 98 aa8.5□□□□□ -1.05
CXCL12-205ENST00000395794 FAM19A5Q7Z5A7 132 aaPredicted RBP8.5□□□□□ -1.05
CXCL12-205ENST00000395794 FAM19A3Q7Z5A8 133 aa8.5□□□□□ -1.05
CXCL12-205ENST00000395794 ALKBH7Q9BT30 221 aaPredicted RBP8.5□□□□□ -1.05
CXCL12-205ENST00000395794 RPS10P5Q9NQ39 176 aa8.5□□□□□ -1.05
CXCL12-205ENST00000395794 SMCO4Q9NRQ5 59 aa8.5□□□□□ -1.05
CXCL12-205ENST00000395794 PSORS1C2Q9UIG4 136 aa8.5□□□□□ -1.05
CXCL12-205ENST00000395794 FABP9Q0Z7S8 132 aa8.49□□□□□ -1.05
CXCL12-205ENST00000395794 SRSF9Q13242 221 aaKnown RBP eCLIP8.49□□□□□ -1.05
CXCL12-205ENST00000395794 FA2HQ7L5A8 372 aa8.49□□□□□ -1.05
CXCL12-205ENST00000395794 MRPL18Q9H0U6 180 aaKnown RBP8.49□□□□□ -1.05
CXCL12-205ENST00000395794 FAM168BA1KXE4 195 aa8.48□□□□□ -1.05
CXCL12-205ENST00000395794 Q8IZM0 81 aa8.48□□□□□ -1.05
CXCL12-205ENST00000395794 CDKN2A-AS1Q9UH64 79 aa8.48□□□□□ -1.05
CXCL12-205ENST00000395794 C10orf91Q5T1B1 145 aa8.47□□□□□ -1.05
CXCL12-205ENST00000395794 LINC00469Q8N7U9 141 aa8.47□□□□□ -1.05
CXCL12-205ENST00000395794 CARHSP1Q9Y2V2 147 aaKnown RBP8.47□□□□□ -1.05
CXCL12-205ENST00000395794 UBE2BP63146 152 aa8.46□□□□□ -1.06
CXCL12-205ENST00000395794 KRTAP19-1Q8IUB9 90 aa8.46□□□□□ -1.06
CXCL12-205ENST00000395794 KRTAP4-8A0A0G2JLE6 195 aa8.45□□□□□ -1.06
CXCL12-205ENST00000395794 TINCRA0A1B0GVN0 87 aa8.45□□□□□ -1.06
CXCL12-205ENST00000395794 LINC01546A6NGU7 62 aa8.45□□□□□ -1.06
CXCL12-205ENST00000395794 F8VRH5 84 aa8.45□□□□□ -1.06
CXCL12-205ENST00000395794 M0QXV9 152 aa8.45□□□□□ -1.06
CXCL12-205ENST00000395794 CXCL5P42830 114 aa8.45□□□□□ -1.06
CXCL12-205ENST00000395794 PMVKQ15126 192 aa8.44□□□□□ -1.06
CXCL12-205ENST00000395794 NDUFA5Q16718 116 aa8.44□□□□□ -1.06
CXCL12-205ENST00000395794 DIRC1Q969H9 104 aa8.44□□□□□ -1.06
CXCL12-205ENST00000395794 CST9LQ9H4G1 147 aa8.44□□□□□ -1.06
CXCL12-205ENST00000395794 IGLV7-43P04211 117 aa8.43□□□□□ -1.06
CXCL12-205ENST00000395794 PDZD11Q5EBL8 140 aa8.43□□□□□ -1.06
CXCL12-205ENST00000395794 TRAPPC1Q9Y5R8 145 aa8.43□□□□□ -1.06
CXCL12-205ENST00000395794 H3BRM9 83 aa8.42□□□□□ -1.06
CXCL12-205ENST00000395794 APOC3P02656 99 aa8.42□□□□□ -1.06
CXCL12-205ENST00000395794 C9orf129Q5T035 196 aaKnown RBP8.42□□□□□ -1.06
CXCL12-205ENST00000395794 SMIM1B2RUZ4 78 aa8.41□□□□□ -1.06
CXCL12-205ENST00000395794 SNAPINO95295 136 aa8.41□□□□□ -1.06
CXCL12-205ENST00000395794 NDUFA6P56556 154 aa8.41□□□□□ -1.06
CXCL12-205ENST00000395794 KRTAP10-8P60410 259 aa8.41□□□□□ -1.06
CXCL12-205ENST00000395794 LBHQ53QV2 105 aaPredicted RBP8.41□□□□□ -1.06
CXCL12-205ENST00000395794 SVBPQ8N300 66 aa8.41□□□□□ -1.06
CXCL12-205ENST00000395794 COX7B2Q8TF08 81 aa8.41□□□□□ -1.06
CXCL12-205ENST00000395794 IGLV5-45A0A087WSX0 123 aa8.4□□□□□ -1.06
CXCL12-205ENST00000395794 LINC00614P0C842 121 aa8.4□□□□□ -1.06
CXCL12-205ENST00000395794 XAGE1AQ9HD64 81 aa8.4□□□□□ -1.06
CXCL12-205ENST00000395794 RAB5BP61020 215 aa8.39□□□□□ -1.07
CXCL12-205ENST00000395794 KRTAP7-1Q8IUC3 87 aa8.39□□□□□ -1.07
CXCL12-205ENST00000395794 SPINK8P0C7L1 97 aa8.38□□□□□ -1.07
CXCL12-205ENST00000395794 KRTAP11-1Q8IUC1 163 aa8.38□□□□□ -1.07
CXCL12-205ENST00000395794 C22orf24Q9Y442 160 aa8.38□□□□□ -1.07
CXCL12-205ENST00000395794 TNXBP22105 4242 aa8.38□□□□□ -1.07
CXCL12-205ENST00000395794 H0Y9J4 135 aa8.37□□□□□ -1.07
CXCL12-205ENST00000395794 ATP5LO75964 103 aa8.37□□□□□ -1.07
CXCL12-205ENST00000395794 HBDP02042 147 aa8.37□□□□□ -1.07
CXCL12-205ENST00000395794 C18orf32Q8TCD1 76 aa8.37□□□□□ -1.07
CXCL12-205ENST00000395794 UBR4Q5T4S7 5183 aa8.35□□□□□ -1.07
CXCL12-205ENST00000395794 NUPR1O60356 82 aa8.35□□□□□ -1.07
CXCL12-205ENST00000395794 IGLC3P0DOY3 106 aa8.35□□□□□ -1.07
CXCL12-205ENST00000395794 TP73-AS1Q9UF72 201 aa8.35□□□□□ -1.07
CXCL12-205ENST00000395794 ODF1Q14990 250 aa8.34□□□□□ -1.07
CXCL12-205ENST00000395794 PMCHL1Q16048 86 aa8.34□□□□□ -1.07
CXCL12-205ENST00000395794 MRPL55Q7Z7F7 128 aaKnown RBP8.34□□□□□ -1.07
CXCL12-205ENST00000395794 A0A096LNJ9 63 aa8.33□□□□□ -1.08
CXCL12-205ENST00000395794 ZNF861PO60384 105 aa8.32□□□□□ -1.08
CXCL12-205ENST00000395794 BAGE3Q86Y29 109 aa8.32□□□□□ -1.08
CXCL12-205ENST00000395794 PRR26Q8N8Z3 221 aa8.32□□□□□ -1.08
CXCL12-205ENST00000395794 NKAPP1Q8N9T2 125 aa8.32□□□□□ -1.08
CXCL12-205ENST00000395794 URB1-AS1Q96HZ7 61 aa8.32□□□□□ -1.08
CXCL12-205ENST00000395794 IGLV1-50A0A075B6I6 118 aa8.31□□□□□ -1.08
CXCL12-205ENST00000395794 ZNF22P17026 224 aaPredicted RBP8.31□□□□□ -1.08
CXCL12-205ENST00000395794 PFN2P35080 140 aa8.31□□□□□ -1.08
CXCL12-205ENST00000395794 TMEM170BQ5T4T1 132 aa8.31□□□□□ -1.08
CXCL12-205ENST00000395794 IGLV5-39A0A0G2JS06 123 aa8.3□□□□□ -1.08
CXCL12-205ENST00000395794 RPL28P46779 137 aaKnown RBP8.3□□□□□ -1.08
CXCL12-205ENST00000395794 SFTA2Q6UW10 78 aa8.3□□□□□ -1.08
CXCL12-205ENST00000395794 CHCHD1Q96BP2 118 aaKnown RBP8.3□□□□□ -1.08
CXCL12-205ENST00000395794 GAGE10A6NGK3 116 aa8.29□□□□□ -1.08
CXCL12-205ENST00000395794 RPL37AP8A6NKH3 93 aa8.29□□□□□ -1.08
CXCL12-205ENST00000395794 RPL13AP40429 203 aaKnown RBP8.29□□□□□ -1.08
CXCL12-205ENST00000395794 LINC00167Q96N53 147 aa8.29□□□□□ -1.08
CXCL12-205ENST00000395794 CHTOPQ9Y3Y2 248 aaKnown RBP8.29□□□□□ -1.08
CXCL12-205ENST00000395794 C11orf86A6NJI1 115 aa8.28□□□□□ -1.08
CXCL12-205ENST00000395794 BCE1O60756 84 aa8.28□□□□□ -1.08
CXCL12-205ENST00000395794 COX17Q14061 63 aa8.28□□□□□ -1.08
CXCL12-205ENST00000395794 ERG28Q9UKR5 140 aa8.28□□□□□ -1.08
CXCL12-205ENST00000395794 IGLV5-37A0A075B6J1 123 aa8.27□□□□□ -1.09
CXCL12-205ENST00000395794 A6NJY4 79 aa8.27□□□□□ -1.09
CXCL12-205ENST00000395794 KRTAP1-4P0C5Y4 121 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms