RNA–Protein interactions for RNA: ENST00000394573.5

SLC28A1-203, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-203ENST00000394573 IGHV3-53P01767 116 aa8.69□□□□□ -1.02
SLC28A1-203ENST00000394573 CXCL6P80162 114 aa8.69□□□□□ -1.02
SLC28A1-203ENST00000394573 CDC42SE2Q9NRR3 84 aa8.69□□□□□ -1.02
SLC28A1-203ENST00000394573 ITPR1Q14643 2758 aa8.69□□□□□ -1.02
SLC28A1-203ENST00000394573 HRNRQ86YZ3 2850 aaPredicted RBP8.69□□□□□ -1.02
SLC28A1-203ENST00000394573 Q1T7F1 81 aa8.69□□□□□ -1.02
SLC28A1-203ENST00000394573 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.69□□□□□ -1.02
SLC28A1-203ENST00000394573 CR1P17927 2039 aa8.68□□□□□ -1.02
SLC28A1-203ENST00000394573 APOC4P55056 127 aa8.68□□□□□ -1.02
SLC28A1-203ENST00000394573 KTN1-AS1Q86SY8 53 aa8.68□□□□□ -1.02
SLC28A1-203ENST00000394573 SYCNQ0VAF6 134 aa8.67□□□□□ -1.02
SLC28A1-203ENST00000394573 UBE2E2Q96LR5 201 aa8.67□□□□□ -1.02
SLC28A1-203ENST00000394573 LY6G6DO95868 133 aa8.67□□□□□ -1.02
SLC28A1-203ENST00000394573 ZFP36P26651 326 aaKnown RBP8.67□□□□□ -1.02
SLC28A1-203ENST00000394573 VPS13CQ709C8 3753 aa8.67□□□□□ -1.02
SLC28A1-203ENST00000394573 K7EQD1 137 aa8.67□□□□□ -1.02
SLC28A1-203ENST00000394573 DEFB109BQ30KR1 87 aa8.67□□□□□ -1.02
SLC28A1-203ENST00000394573 C5orf56Q8N8D9 126 aa8.67□□□□□ -1.02
SLC28A1-203ENST00000394573 SPG11Q96JI7 2443 aa8.66□□□□□ -1.02
SLC28A1-203ENST00000394573 FAM30AQ9NZY2 134 aa8.66□□□□□ -1.02
SLC28A1-203ENST00000394573 ACACAQ13085 2346 aa8.66□□□□□ -1.02
SLC28A1-203ENST00000394573 OCR1Q9BZK8 76 aa8.65□□□□□ -1.02
SLC28A1-203ENST00000394573 LINC00588Q9Y4M8 146 aa8.65□□□□□ -1.02
SLC28A1-203ENST00000394573 WNK1Q9H4A3 2382 aa8.65□□□□□ -1.02
SLC28A1-203ENST00000394573 BDP1A6H8Y1 2624 aa8.65□□□□□ -1.02
SLC28A1-203ENST00000394573 ANKRD17O75179 2603 aaKnown RBP8.65□□□□□ -1.03
SLC28A1-203ENST00000394573 M0R378 163 aa8.65□□□□□ -1.03
SLC28A1-203ENST00000394573 BSNQ9UPA5 3926 aa8.65□□□□□ -1.03
SLC28A1-203ENST00000394573 LOC110117498A0A087WWA1 95 aa8.64□□□□□ -1.03
SLC28A1-203ENST00000394573 KLK9Q2XQG4 91 aa8.64□□□□□ -1.03
SLC28A1-203ENST00000394573 FAM19A3Q7Z5A8 133 aa8.64□□□□□ -1.03
SLC28A1-203ENST00000394573 ANKRD11Q6UB99 2663 aaPredicted RBP8.64□□□□□ -1.03
SLC28A1-203ENST00000394573 MINOS1-NBL1R4GNA1 71 aa8.64□□□□□ -1.03
SLC28A1-203ENST00000394573 TTC28Q96AY4 2481 aa8.64□□□□□ -1.03
SLC28A1-203ENST00000394573 UBE2L6O14933 153 aa8.63□□□□□ -1.03
SLC28A1-203ENST00000394573 LY6EQ16553 131 aa8.63□□□□□ -1.03
SLC28A1-203ENST00000394573 Q6ZQY7 126 aa8.63□□□□□ -1.03
SLC28A1-203ENST00000394573 MUC7Q8TAX7 377 aa8.63□□□□□ -1.03
SLC28A1-203ENST00000394573 CHD6Q8TD26 2715 aa8.62□□□□□ -1.03
SLC28A1-203ENST00000394573 ESM1Q9NQ30 184 aa8.62□□□□□ -1.03
SLC28A1-203ENST00000394573 C10orf25Q5T742 122 aa8.62□□□□□ -1.03
SLC28A1-203ENST00000394573 H3BS24 57 aa8.61□□□□□ -1.03
SLC28A1-203ENST00000394573 LINC01560Q8TB33 94 aa8.61□□□□□ -1.03
SLC28A1-203ENST00000394573 C16orf90A8MZG2 172 aa8.61□□□□□ -1.03
SLC28A1-203ENST00000394573 ERC2-IT1O76042 136 aa8.61□□□□□ -1.03
SLC28A1-203ENST00000394573 CHKB-CPT1BH3BT56 60 aa8.61□□□□□ -1.03
SLC28A1-203ENST00000394573 LINC00575Q6W349 94 aa8.6□□□□□ -1.03
SLC28A1-203ENST00000394573 IGKV4-1P06312 121 aa8.6□□□□□ -1.03
SLC28A1-203ENST00000394573 LINC00269Q8N2A0 174 aa8.6□□□□□ -1.03
SLC28A1-203ENST00000394573 UBE2BP63146 152 aa8.59□□□□□ -1.03
SLC28A1-203ENST00000394573 Q5VV11 94 aa8.59□□□□□ -1.03
SLC28A1-203ENST00000394573 Q8NDZ9 215 aa8.59□□□□□ -1.03
SLC28A1-203ENST00000394573 IGLV4-60A0A075B6I1 120 aa8.59□□□□□ -1.03
SLC28A1-203ENST00000394573 LINC00612Q8N6U2 182 aa8.59□□□□□ -1.03
SLC28A1-203ENST00000394573 C9orf116Q5BN46 136 aaPredicted RBP8.58□□□□□ -1.04
SLC28A1-203ENST00000394573 BRD3OSQ6XYD6 125 aa8.57□□□□□ -1.04
SLC28A1-203ENST00000394573 TRGV1A0A0A0MS02 117 aa8.57□□□□□ -1.04
SLC28A1-203ENST00000394573 PSCAO43653 123 aa8.57□□□□□ -1.04
SLC28A1-203ENST00000394573 SMIM29Q86T20 159 aa8.57□□□□□ -1.04
SLC28A1-203ENST00000394573 IGHV3OR16-9A0A0B4J2B5 98 aa8.56□□□□□ -1.04
SLC28A1-203ENST00000394573 LOC100131303A0A0U1RQF7 123 aa8.56□□□□□ -1.04
SLC28A1-203ENST00000394573 C11orf44Q8N8P7 122 aa8.56□□□□□ -1.04
SLC28A1-203ENST00000394573 DEFB131AP59861 70 aa8.56□□□□□ -1.04
SLC28A1-203ENST00000394573 ZNF73O43830 326 aaPredicted RBP8.56□□□□□ -1.04
SLC28A1-203ENST00000394573 CLPSL2Q6UWE3 100 aa8.56□□□□□ -1.04
SLC28A1-203ENST00000394573 ARRDC1-AS1Q9H2J1 176 aa8.56□□□□□ -1.04
SLC28A1-203ENST00000394573 HCG22E2RYF7 251 aa8.55□□□□□ -1.04
SLC28A1-203ENST00000394573 C10orf99Q6UWK7 81 aa8.55□□□□□ -1.04
SLC28A1-203ENST00000394573 C8orf87E5RJ46 101 aa8.54□□□□□ -1.04
SLC28A1-203ENST00000394573 C3orf84H3BNL1 204 aa8.54□□□□□ -1.04
SLC28A1-203ENST00000394573 KLK12Q9UKR0 248 aa8.54□□□□□ -1.04
SLC28A1-203ENST00000394573 CSPG4Q6UVK1 2322 aa8.54□□□□□ -1.04
SLC28A1-203ENST00000394573 C9orf66Q5T8R8 295 aa8.53□□□□□ -1.04
SLC28A1-203ENST00000394573 USMG5Q96IX5 58 aa8.53□□□□□ -1.04
SLC28A1-203ENST00000394573 TRGV2A0A075B6R0 118 aa8.53□□□□□ -1.04
SLC28A1-203ENST00000394573 JMJD1CQ15652 2540 aa8.52□□□□□ -1.04
SLC28A1-203ENST00000394573 KHDC1LQ5JSQ8 128 aa8.52□□□□□ -1.05
SLC28A1-203ENST00000394573 NBPF19A0A087WUL8 3843 aa8.52□□□□□ -1.05
SLC28A1-203ENST00000394573 K7EMT4 169 aa8.52□□□□□ -1.05
SLC28A1-203ENST00000394573 PRR15LQ9BU68 103 aa8.52□□□□□ -1.05
SLC28A1-203ENST00000394573 LCA10Q71F78 164 aa8.51□□□□□ -1.05
SLC28A1-203ENST00000394573 TLN1Q9Y490 2541 aaKnown RBP8.51□□□□□ -1.05
SLC28A1-203ENST00000394573 IGHV4-28A0A0C4DH34 117 aa8.5□□□□□ -1.05
SLC28A1-203ENST00000394573 UBE2AP49459 152 aa8.5□□□□□ -1.05
SLC28A1-203ENST00000394573 PDE6GP18545 87 aa8.49□□□□□ -1.05
SLC28A1-203ENST00000394573 AKAP9Q99996 3911 aa8.49□□□□□ -1.05
SLC28A1-203ENST00000394573 TRBV6-8A0A0A6YYG3 113 aa8.49□□□□□ -1.05
SLC28A1-203ENST00000394573 ST20-AS1Q8NBB2 130 aa8.48□□□□□ -1.05
SLC28A1-203ENST00000394573 A6NED7 52 aa8.47□□□□□ -1.05
SLC28A1-203ENST00000394573 A6NN06 94 aa8.47□□□□□ -1.05
SLC28A1-203ENST00000394573 NIPBLQ6KC79 2804 aaeCLIP8.46□□□□□ -1.05
SLC28A1-203ENST00000394573 APCP25054 2843 aa8.46□□□□□ -1.06
SLC28A1-203ENST00000394573 TRGV4A0A0C4DH28 118 aa8.46□□□□□ -1.06
SLC28A1-203ENST00000394573 SONP18583 2426 aaKnown RBP8.46□□□□□ -1.06
SLC28A1-203ENST00000394573 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.45□□□□□ -1.06
SLC28A1-203ENST00000394573 H3BUX3 64 aa8.45□□□□□ -1.06
SLC28A1-203ENST00000394573 NDUFS5O43920 106 aa8.45□□□□□ -1.06
SLC28A1-203ENST00000394573 LYRM9A8MSI8 78 aa8.45□□□□□ -1.06
SLC28A1-203ENST00000394573 DIRC1Q969H9 104 aa8.45□□□□□ -1.06
SLC28A1-203ENST00000394573 NF1P21359 2839 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms