RNA–Protein interactions for RNA: ENST00000393860.7

RAB5C-202, Transcript of RAB5C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5C, Length 1,912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-202ENST00000393860 A4D1N5 150 aa13.22□□□□□ -0.29
RAB5C-202ENST00000393860 CIRBPQ14011 172 aaKnown RBP13.22□□□□□ -0.29
RAB5C-202ENST00000393860 H3BUT2 72 aa13.21□□□□□ -0.29
RAB5C-202ENST00000393860 Q8IZM0 81 aa13.21□□□□□ -0.29
RAB5C-202ENST00000393860 TRAV8-4A0A0B4J246 113 aa13.21□□□□□ -0.3
RAB5C-202ENST00000393860 Q9HAA7 133 aa13.21□□□□□ -0.3
RAB5C-202ENST00000393860 C9orf118A6NHY6 69 aa13.2□□□□□ -0.3
RAB5C-202ENST00000393860 KIAA0087Q14695 138 aa13.2□□□□□ -0.3
RAB5C-202ENST00000393860 LINC00526Q96FQ7 95 aa13.2□□□□□ -0.3
RAB5C-202ENST00000393860 A0A1B0GWB2 263 aa13.19□□□□□ -0.3
RAB5C-202ENST00000393860 CFC1BP0CG36 223 aa13.19□□□□□ -0.3
RAB5C-202ENST00000393860 CFC1P0CG37 223 aa13.19□□□□□ -0.3
RAB5C-202ENST00000393860 RPL24P83731 157 aaKnown RBP13.19□□□□□ -0.3
RAB5C-202ENST00000393860 APLNQ9ULZ1 77 aa13.19□□□□□ -0.3
RAB5C-202ENST00000393860 KRTAP26-1Q6PEX3 210 aa13.18□□□□□ -0.3
RAB5C-202ENST00000393860 IGKV2D-24A0A075B6R9 120 aa13.17□□□□□ -0.3
RAB5C-202ENST00000393860 PFN2P35080 140 aa13.17□□□□□ -0.3
RAB5C-202ENST00000393860 CKS1BP61024 79 aa13.17□□□□□ -0.3
RAB5C-202ENST00000393860 C6orf223Q8N319 242 aa13.17□□□□□ -0.3
RAB5C-202ENST00000393860 SPAG11BQ08648 103 aa13.17□□□□□ -0.3
RAB5C-202ENST00000393860 VAMP3Q15836 100 aa13.17□□□□□ -0.3
RAB5C-202ENST00000393860 LINC00158P58513 81 aa13.16□□□□□ -0.3
RAB5C-202ENST00000393860 SOSTDC1Q6X4U4 206 aa13.16□□□□□ -0.3
RAB5C-202ENST00000393860 LINC00308Q8TCZ7 52 aa13.16□□□□□ -0.3
RAB5C-202ENST00000393860 C1orf43Q9BWL3 253 aa13.16□□□□□ -0.3
RAB5C-202ENST00000393860 DYNC2H1Q8NCM8 4307 aaKnown RBP13.15□□□□□ -0.3
RAB5C-202ENST00000393860 MIR7-3HGQ8N6C7 128 aa13.15□□□□□ -0.3
RAB5C-202ENST00000393860 UPK3BQ9BT76 320 aa13.15□□□□□ -0.3
RAB5C-202ENST00000393860 KLK5Q9Y337 293 aaPredicted RBP13.15□□□□□ -0.3
RAB5C-202ENST00000393860 PGPEP1Q9NXJ5 209 aa13.14□□□□□ -0.31
RAB5C-202ENST00000393860 ERG28Q9UKR5 140 aa13.14□□□□□ -0.31
RAB5C-202ENST00000393860 UBE2DNLQ8IWF7 75 aa13.13□□□□□ -0.31
RAB5C-202ENST00000393860 CSMD3Q7Z407 3707 aa13.13□□□□□ -0.31
RAB5C-202ENST00000393860 IFITM1P13164 125 aa13.13□□□□□ -0.31
RAB5C-202ENST00000393860 HIGD2BQ4VC39 106 aa13.13□□□□□ -0.31
RAB5C-202ENST00000393860 IBA57-AS1B1ANH7 110 aa13.12□□□□□ -0.31
RAB5C-202ENST00000393860 C9orf116Q5BN46 136 aaPredicted RBP13.12□□□□□ -0.31
RAB5C-202ENST00000393860 LYSTQ99698 3801 aa13.12□□□□□ -0.31
RAB5C-202ENST00000393860 NUPR2A6NF83 97 aa13.11□□□□□ -0.31
RAB5C-202ENST00000393860 C10orf25Q5T742 122 aa13.11□□□□□ -0.31
RAB5C-202ENST00000393860 SFTA2Q6UW10 78 aa13.11□□□□□ -0.31
RAB5C-202ENST00000393860 A0A1W2PPM0 123 aa13.11□□□□□ -0.31
RAB5C-202ENST00000393860 TSPAN13O95857 204 aa13.11□□□□□ -0.31
RAB5C-202ENST00000393860 UNQ6190/PRO20217Q6UXQ8 127 aa13.11□□□□□ -0.31
RAB5C-202ENST00000393860 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.1□□□□□ -0.31
RAB5C-202ENST00000393860 H7C2G1 150 aa13.1□□□□□ -0.31
RAB5C-202ENST00000393860 CXCL5P42830 114 aa13.1□□□□□ -0.31
RAB5C-202ENST00000393860 PRO1854Q9UHT4 67 aa13.09□□□□□ -0.31
RAB5C-202ENST00000393860 A0A0B4J2C4 111 aa13.09□□□□□ -0.31
RAB5C-202ENST00000393860 C15orf56Q8N910 161 aa13.09□□□□□ -0.31
RAB5C-202ENST00000393860 DNAH7Q8WXX0 4024 aa13.07□□□□□ -0.32
RAB5C-202ENST00000393860 CASC10Q5T4H9 136 aa13.07□□□□□ -0.32
RAB5C-202ENST00000393860 KRTAP1-5Q9BYS1 174 aa13.07□□□□□ -0.32
RAB5C-202ENST00000393860 DNAH1Q9P2D7 4330 aa13.06□□□□□ -0.32
RAB5C-202ENST00000393860 FABP2P12104 132 aa13.06□□□□□ -0.32
RAB5C-202ENST00000393860 NTN5Q8WTR8 489 aaPredicted RBP13.06□□□□□ -0.32
RAB5C-202ENST00000393860 PLECQ15149 4684 aaKnown RBP13.05□□□□□ -0.32
RAB5C-202ENST00000393860 ZNF561-AS1K7EIQ3 104 aa13.05□□□□□ -0.32
RAB5C-202ENST00000393860 SPCS1Q9Y6A9 102 aa13.05□□□□□ -0.32
RAB5C-202ENST00000393860 UBE2V1Q13404 147 aa13.04□□□□□ -0.32
RAB5C-202ENST00000393860 COPS9Q8WXC6 57 aa13.04□□□□□ -0.32
RAB5C-202ENST00000393860 STARD9Q9P2P6 4700 aa13.04□□□□□ -0.32
RAB5C-202ENST00000393860 Q1RN00 199 aa13.03□□□□□ -0.32
RAB5C-202ENST00000393860 GAGE10A6NGK3 116 aa13.03□□□□□ -0.32
RAB5C-202ENST00000393860 LOC107984156A0A0G2JMH3 177 aa13.02□□□□□ -0.32
RAB5C-202ENST00000393860 K7EP34 96 aa13.02□□□□□ -0.32
RAB5C-202ENST00000393860 ARL17AQ8IVW1 177 aa13.02□□□□□ -0.32
RAB5C-202ENST00000393860 CAMK2N2Q96S95 79 aa13.02□□□□□ -0.32
RAB5C-202ENST00000393860 SND1-IT1Q9HBX3 110 aa13.02□□□□□ -0.32
RAB5C-202ENST00000393860 C6orf48Q9UBA6 75 aa13.02□□□□□ -0.32
RAB5C-202ENST00000393860 RPL13AP40429 203 aaKnown RBP13.01□□□□□ -0.33
RAB5C-202ENST00000393860 FBN3Q75N90 2809 aa13.01□□□□□ -0.33
RAB5C-202ENST00000393860 LECT2O14960 151 aa13□□□□□ -0.33
RAB5C-202ENST00000393860 RMI2Q96E14 147 aa13□□□□□ -0.33
RAB5C-202ENST00000393860 PSMB2P49721 201 aa12.99□□□□□ -0.33
RAB5C-202ENST00000393860 COX17Q14061 63 aa12.99□□□□□ -0.33
RAB5C-202ENST00000393860 Q6ZRU5 148 aa12.99□□□□□ -0.33
RAB5C-202ENST00000393860 GVQW2A0A096LPI5 108 aaPredicted RBP12.98□□□□□ -0.33
RAB5C-202ENST00000393860 GTF2H5Q6ZYL4 71 aa12.98□□□□□ -0.33
RAB5C-202ENST00000393860 TENM2Q9NT68 2774 aa12.97□□□□□ -0.33
RAB5C-202ENST00000393860 IGKV2-28A0A075B6P5 120 aa12.97□□□□□ -0.33
RAB5C-202ENST00000393860 USP17L23D6RBM5 183 aa12.97□□□□□ -0.33
RAB5C-202ENST00000393860 IGKV2D-28P01615 120 aa12.97□□□□□ -0.33
RAB5C-202ENST00000393860 PPDPFQ9H3Y8 114 aa12.96□□□□□ -0.33
RAB5C-202ENST00000393860 C2orf48Q96LS8 159 aa12.95□□□□□ -0.34
RAB5C-202ENST00000393860 SCGB1C2P0DMR2 95 aa12.94□□□□□ -0.34
RAB5C-202ENST00000393860 LINC00337Q8N6G1 96 aa12.94□□□□□ -0.34
RAB5C-202ENST00000393860 TRIAP1O43715 76 aa12.94□□□□□ -0.34
RAB5C-202ENST00000393860 TRBV30A0A0K0K1B3 111 aa12.93□□□□□ -0.34
RAB5C-202ENST00000393860 PRR3P79522 188 aaKnown RBP12.93□□□□□ -0.34
RAB5C-202ENST00000393860 Q8NDZ9 215 aa12.92□□□□□ -0.34
RAB5C-202ENST00000393860 H3BMG7 143 aa12.92□□□□□ -0.34
RAB5C-202ENST00000393860 SYCNQ0VAF6 134 aa12.92□□□□□ -0.34
RAB5C-202ENST00000393860 DNAH10Q8IVF4 4471 aa12.91□□□□□ -0.34
RAB5C-202ENST00000393860 WFDC2Q14508 124 aa12.91□□□□□ -0.34
RAB5C-202ENST00000393860 XAGE1AQ9HD64 81 aa12.91□□□□□ -0.34
RAB5C-202ENST00000393860 NBDYA0A0U1RRE5 68 aa12.9□□□□□ -0.34
RAB5C-202ENST00000393860 TCL1BO95988 128 aa12.9□□□□□ -0.34
RAB5C-202ENST00000393860 MUC7Q8TAX7 377 aa12.9□□□□□ -0.34
RAB5C-202ENST00000393860 SLPIP03973 132 aa12.9□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 675.3 ms