RNA–Protein interactions for RNA: ENST00000392449.4

PTPRK-208, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2

Gene PTPRK, Length 1,456 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-208ENST00000392449 CDKN2A-AS1Q9UH64 79 aa10□□□□□ -0.81
PTPRK-208ENST00000392449 KRTAP1-4P0C5Y4 121 aa9.99□□□□□ -0.81
PTPRK-208ENST00000392449 ADCYAP1P18509 176 aa9.99□□□□□ -0.81
PTPRK-208ENST00000392449 XAGE1AQ9HD64 81 aa9.99□□□□□ -0.81
PTPRK-208ENST00000392449 NXT2Q9NPJ8 142 aaKnown RBP9.99□□□□□ -0.81
PTPRK-208ENST00000392449 CKS1BP61024 79 aa9.98□□□□□ -0.81
PTPRK-208ENST00000392449 C6orf226Q5I0X4 101 aa9.98□□□□□ -0.81
PTPRK-208ENST00000392449 FAM19A3Q7Z5A8 133 aa9.98□□□□□ -0.81
PTPRK-208ENST00000392449 ALKBH7Q9BT30 221 aaPredicted RBP9.98□□□□□ -0.81
PTPRK-208ENST00000392449 Q8IZM0 81 aa9.98□□□□□ -0.81
PTPRK-208ENST00000392449 K7EMI3 77 aa9.96□□□□□ -0.82
PTPRK-208ENST00000392449 NPSP0C0P6 89 aa9.96□□□□□ -0.82
PTPRK-208ENST00000392449 TOMM6Q96B49 74 aa9.96□□□□□ -0.82
PTPRK-208ENST00000392449 HERVK_113P63121 156 aa9.95□□□□□ -0.82
PTPRK-208ENST00000392449 TIMM17AQ99595 171 aa9.95□□□□□ -0.82
PTPRK-208ENST00000392449 GEMIN7Q9H840 131 aaKnown RBP9.95□□□□□ -0.82
PTPRK-208ENST00000392449 C22orf24Q9Y442 160 aa9.95□□□□□ -0.82
PTPRK-208ENST00000392449 CLLU1Q5K131 121 aa9.94□□□□□ -0.82
PTPRK-208ENST00000392449 SMIM1B2RUZ4 78 aa9.92□□□□□ -0.82
PTPRK-208ENST00000392449 F8VRH5 84 aa9.92□□□□□ -0.82
PTPRK-208ENST00000392449 SCGB3A1Q96QR1 104 aa9.92□□□□□ -0.82
PTPRK-208ENST00000392449 IGLV1-50A0A075B6I6 118 aa9.91□□□□□ -0.82
PTPRK-208ENST00000392449 SEC11AP67812 179 aa9.91□□□□□ -0.82
PTPRK-208ENST00000392449 PAPPA-AS1Q5QFB9 102 aa9.91□□□□□ -0.82
PTPRK-208ENST00000392449 ERASQ7Z444 233 aa9.91□□□□□ -0.82
PTPRK-208ENST00000392449 TMEM218A2RU14 115 aa9.9□□□□□ -0.83
PTPRK-208ENST00000392449 ZNF861PO60384 105 aa9.89□□□□□ -0.83
PTPRK-208ENST00000392449 IFITM2Q01629 132 aa9.89□□□□□ -0.83
PTPRK-208ENST00000392449 SPINK8P0C7L1 97 aa9.88□□□□□ -0.83
PTPRK-208ENST00000392449 G0S2P27469 103 aa9.88□□□□□ -0.83
PTPRK-208ENST00000392449 MRPL55Q7Z7F7 128 aaKnown RBP9.88□□□□□ -0.83
PTPRK-208ENST00000392449 COX7B2Q8TF08 81 aa9.88□□□□□ -0.83
PTPRK-208ENST00000392449 TINCRA0A1B0GVN0 87 aa9.87□□□□□ -0.83
PTPRK-208ENST00000392449 CST9LQ9H4G1 147 aa9.87□□□□□ -0.83
PTPRK-208ENST00000392449 TRAV9-1A0A075B6T8 112 aa9.86□□□□□ -0.83
PTPRK-208ENST00000392449 IGLV5-45A0A087WSX0 123 aa9.86□□□□□ -0.83
PTPRK-208ENST00000392449 GAGE10A6NGK3 116 aa9.86□□□□□ -0.83
PTPRK-208ENST00000392449 RPL37AP8A6NKH3 93 aa9.86□□□□□ -0.83
PTPRK-208ENST00000392449 CXCL5P42830 114 aa9.86□□□□□ -0.83
PTPRK-208ENST00000392449 RAB5BP61020 215 aa9.86□□□□□ -0.83
PTPRK-208ENST00000392449 LBHQ53QV2 105 aaPredicted RBP9.86□□□□□ -0.83
PTPRK-208ENST00000392449 UQCC3Q6UW78 93 aa9.86□□□□□ -0.83
PTPRK-208ENST00000392449 GNB1LQ9BYB4 327 aa9.86□□□□□ -0.83
PTPRK-208ENST00000392449 LINC01546A6NGU7 62 aa9.85□□□□□ -0.83
PTPRK-208ENST00000392449 NUPR1O60356 82 aa9.85□□□□□ -0.83
PTPRK-208ENST00000392449 PDZD11Q5EBL8 140 aa9.85□□□□□ -0.83
PTPRK-208ENST00000392449 LINC00167Q96N53 147 aa9.85□□□□□ -0.83
PTPRK-208ENST00000392449 TP73-AS1Q9UF72 201 aa9.85□□□□□ -0.83
PTPRK-208ENST00000392449 S100PP25815 95 aa9.84□□□□□ -0.83
PTPRK-208ENST00000392449 RPL13AP40429 203 aaKnown RBP9.84□□□□□ -0.83
PTPRK-208ENST00000392449 PRR4Q16378 134 aa9.84□□□□□ -0.83
PTPRK-208ENST00000392449 MRPL18Q9H0U6 180 aaKnown RBP9.84□□□□□ -0.83
PTPRK-208ENST00000392449 A0A087X002 238 aa9.83□□□□□ -0.84
PTPRK-208ENST00000392449 BCE1O60756 84 aa9.83□□□□□ -0.84
PTPRK-208ENST00000392449 SCO1O75880 301 aa9.83□□□□□ -0.84
PTPRK-208ENST00000392449 FA2HQ7L5A8 372 aa9.83□□□□□ -0.84
PTPRK-208ENST00000392449 SEC11CQ9BY50 192 aa9.83□□□□□ -0.84
PTPRK-208ENST00000392449 FABP9Q0Z7S8 132 aa9.82□□□□□ -0.84
PTPRK-208ENST00000392449 PMVKQ15126 192 aa9.82□□□□□ -0.84
PTPRK-208ENST00000392449 CARHSP1Q9Y2V2 147 aaKnown RBP9.82□□□□□ -0.84
PTPRK-208ENST00000392449 TSPAN13O95857 204 aa9.81□□□□□ -0.84
PTPRK-208ENST00000392449 COMMD7Q86VX2 200 aa9.81□□□□□ -0.84
PTPRK-208ENST00000392449 SMCO4Q9NRQ5 59 aa9.81□□□□□ -0.84
PTPRK-208ENST00000392449 ANAPC11Q9NYG5 84 aa9.81□□□□□ -0.84
PTPRK-208ENST00000392449 A0A096LNJ9 63 aa9.8□□□□□ -0.84
PTPRK-208ENST00000392449 RPL28P46779 137 aaKnown RBP9.8□□□□□ -0.84
PTPRK-208ENST00000392449 PFN2P35080 140 aa9.79□□□□□ -0.84
PTPRK-208ENST00000392449 NDUFA6P56556 154 aa9.79□□□□□ -0.84
PTPRK-208ENST00000392449 URB1-AS1Q96HZ7 61 aa9.79□□□□□ -0.84
PTPRK-208ENST00000392449 LINC01549A6NIU2 74 aa9.78□□□□□ -0.84
PTPRK-208ENST00000392449 PMCHL1Q16048 86 aa9.78□□□□□ -0.84
PTPRK-208ENST00000392449 RPS10P5Q9NQ39 176 aa9.78□□□□□ -0.84
PTPRK-208ENST00000392449 IGLV5-37A0A075B6J1 123 aa9.77□□□□□ -0.85
PTPRK-208ENST00000392449 IGKV2-28A0A075B6P5 120 aa9.77□□□□□ -0.85
PTPRK-208ENST00000392449 H3BRM9 83 aa9.77□□□□□ -0.85
PTPRK-208ENST00000392449 ATP5LO75964 103 aa9.77□□□□□ -0.85
PTPRK-208ENST00000392449 IGKV2D-28P01615 120 aa9.77□□□□□ -0.85
PTPRK-208ENST00000392449 IGLC3P0DOY3 106 aa9.77□□□□□ -0.85
PTPRK-208ENST00000392449 NKAPP1Q8N9T2 125 aa9.77□□□□□ -0.85
PTPRK-208ENST00000392449 MUC2Q02817 5179 aa9.76□□□□□ -0.85
PTPRK-208ENST00000392449 IGLV5-39A0A0G2JS06 123 aa9.76□□□□□ -0.85
PTPRK-208ENST00000392449 ZNF22P17026 224 aaPredicted RBP9.76□□□□□ -0.85
PTPRK-208ENST00000392449 COX19Q49B96 90 aa9.76□□□□□ -0.85
PTPRK-208ENST00000392449 KRTAP13-1Q8IUC0 172 aa9.76□□□□□ -0.85
PTPRK-208ENST00000392449 C10orf91Q5T1B1 145 aa9.75□□□□□ -0.85
PTPRK-208ENST00000392449 UBE2AP49459 152 aa9.74□□□□□ -0.85
PTPRK-208ENST00000392449 TYMSOSQ8TAI1 123 aa9.74□□□□□ -0.85
PTPRK-208ENST00000392449 C18orf32Q8TCD1 76 aa9.74□□□□□ -0.85
PTPRK-208ENST00000392449 ZNF625Q96I27 306 aaPredicted RBP9.74□□□□□ -0.85
PTPRK-208ENST00000392449 CRYGAP11844 174 aa9.73□□□□□ -0.85
PTPRK-208ENST00000392449 RHEBQ15382 184 aa9.73□□□□□ -0.85
PTPRK-208ENST00000392449 KRTAP13-2Q52LG2 175 aa9.73□□□□□ -0.85
PTPRK-208ENST00000392449 Q8NDZ9 215 aa9.73□□□□□ -0.85
PTPRK-208ENST00000392449 PRLHP81277 87 aa9.72□□□□□ -0.85
PTPRK-208ENST00000392449 SND1-IT1Q9HBX3 110 aa9.72□□□□□ -0.85
PTPRK-208ENST00000392449 TRAPPC1Q9Y5R8 145 aa9.72□□□□□ -0.85
PTPRK-208ENST00000392449 C11orf86A6NJI1 115 aa9.72□□□□□ -0.85
PTPRK-208ENST00000392449 TMEM238C9JI98 176 aa9.72□□□□□ -0.85
PTPRK-208ENST00000392449 LINC00614P0C842 121 aa9.72□□□□□ -0.85
PTPRK-208ENST00000392449 VPREB1P12018 145 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 109.6 ms