RNA–Protein interactions for RNA: ENST00000392088.6

TUBA4A-202, Transcript of tubulin alpha 4a, humanhuman

TSL 2 BASIC

Gene TUBA4A, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA4A-202ENST00000392088 ZNF843Q8N446 348 aa13.65□□□□□ -0.22
TUBA4A-202ENST00000392088 CXCL5P42830 114 aa13.64□□□□□ -0.23
TUBA4A-202ENST00000392088 C6orf226Q5I0X4 101 aa13.64□□□□□ -0.23
TUBA4A-202ENST00000392088 FAM110AQ9BQ89 295 aa13.64□□□□□ -0.23
TUBA4A-202ENST00000392088 CLPSL2Q6UWE3 100 aa13.64□□□□□ -0.23
TUBA4A-202ENST00000392088 OBSCN-AS1Q96MR7 158 aa13.64□□□□□ -0.23
TUBA4A-202ENST00000392088 ACANP16112 2415 aa13.63□□□□□ -0.23
TUBA4A-202ENST00000392088 NCR3O14931 201 aa13.63□□□□□ -0.23
TUBA4A-202ENST00000392088 ANK3Q12955 4377 aaKnown RBP13.63□□□□□ -0.23
TUBA4A-202ENST00000392088 C3orf22Q8N5N4 141 aa13.62□□□□□ -0.23
TUBA4A-202ENST00000392088 MTORP42345 2549 aa13.62□□□□□ -0.23
TUBA4A-202ENST00000392088 GYPEP15421 78 aa13.61□□□□□ -0.23
TUBA4A-202ENST00000392088 KLK5Q9Y337 293 aaPredicted RBP13.61□□□□□ -0.23
TUBA4A-202ENST00000392088 LY6G6DO95868 133 aa13.61□□□□□ -0.23
TUBA4A-202ENST00000392088 LINC00846Q9NV44 126 aa13.61□□□□□ -0.23
TUBA4A-202ENST00000392088 A0A096LPF7 62 aa13.59□□□□□ -0.23
TUBA4A-202ENST00000392088 PRR3P79522 188 aaKnown RBP13.59□□□□□ -0.23
TUBA4A-202ENST00000392088 C9orf153Q5TBE3 101 aa13.59□□□□□ -0.23
TUBA4A-202ENST00000392088 IGKV3D-7A0A0C4DH55 119 aa13.59□□□□□ -0.23
TUBA4A-202ENST00000392088 SS18Q15532 418 aa13.58□□□□□ -0.23
TUBA4A-202ENST00000392088 TMEM126AQ9H061 195 aa13.58□□□□□ -0.23
TUBA4A-202ENST00000392088 UQCRQO14949 82 aa13.57□□□□□ -0.24
TUBA4A-202ENST00000392088 HIST1H4AP62805 103 aaKnown RBP13.57□□□□□ -0.24
TUBA4A-202ENST00000392088 C16orf95Q9H693 158 aa13.57□□□□□ -0.24
TUBA4A-202ENST00000392088 NANOS2P60321 138 aaKnown RBP13.57□□□□□ -0.24
TUBA4A-202ENST00000392088 GCN1Q92616 2671 aaKnown RBP13.57□□□□□ -0.24
TUBA4A-202ENST00000392088 NBEAL2Q6ZNJ1 2754 aa13.56□□□□□ -0.24
TUBA4A-202ENST00000392088 KRTAP1-1Q07627 177 aa13.56□□□□□ -0.24
TUBA4A-202ENST00000392088 Q8IZM0 81 aa13.56□□□□□ -0.24
TUBA4A-202ENST00000392088 KIR2DL5BQ8NHK3 375 aa13.56□□□□□ -0.24
TUBA4A-202ENST00000392088 C2orf48Q96LS8 159 aa13.56□□□□□ -0.24
TUBA4A-202ENST00000392088 LINC00612Q8N6U2 182 aa13.55□□□□□ -0.24
TUBA4A-202ENST00000392088 LINC00526Q96FQ7 95 aa13.55□□□□□ -0.24
TUBA4A-202ENST00000392088 RNASE1P07998 156 aaKnown RBP13.55□□□□□ -0.24
TUBA4A-202ENST00000392088 A0A1B0GUV1 79 aa13.54□□□□□ -0.24
TUBA4A-202ENST00000392088 ORMDL1Q9P0S3 153 aa13.54□□□□□ -0.24
TUBA4A-202ENST00000392088 COX7CP15954 63 aa13.53□□□□□ -0.24
TUBA4A-202ENST00000392088 Q6JHZ5 121 aa13.52□□□□□ -0.24
TUBA4A-202ENST00000392088 Q8N3U1 123 aa13.52□□□□□ -0.24
TUBA4A-202ENST00000392088 A0A087WVE0 104 aa13.52□□□□□ -0.25
TUBA4A-202ENST00000392088 KIAA0087Q14695 138 aa13.51□□□□□ -0.25
TUBA4A-202ENST00000392088 X6R8D5 127 aa13.51□□□□□ -0.25
TUBA4A-202ENST00000392088 C9orf116Q5BN46 136 aaPredicted RBP13.5□□□□□ -0.25
TUBA4A-202ENST00000392088 LINC00269Q8N2A0 174 aa13.5□□□□□ -0.25
TUBA4A-202ENST00000392088 LINC00167Q96N53 147 aa13.5□□□□□ -0.25
TUBA4A-202ENST00000392088 IGLV10-54A0A075B6I4 117 aa13.49□□□□□ -0.25
TUBA4A-202ENST00000392088 LINC01561Q8N1V8 128 aa13.49□□□□□ -0.25
TUBA4A-202ENST00000392088 Q8NDZ9 215 aa13.49□□□□□ -0.25
TUBA4A-202ENST00000392088 PRO0255Q9UI72 69 aa13.49□□□□□ -0.25
TUBA4A-202ENST00000392088 ATOX1O00244 68 aa13.48□□□□□ -0.25
TUBA4A-202ENST00000392088 PDZD2O15018 2839 aa13.48□□□□□ -0.25
TUBA4A-202ENST00000392088 RPL18AQ02543 176 aaKnown RBP13.48□□□□□ -0.25
TUBA4A-202ENST00000392088 Q8N814 137 aa13.48□□□□□ -0.25
TUBA4A-202ENST00000392088 CCKP06307 115 aa13.47□□□□□ -0.25
TUBA4A-202ENST00000392088 KRTAP10-3P60369 221 aa13.47□□□□□ -0.25
TUBA4A-202ENST00000392088 CYSTM1Q9H1C7 97 aa13.46□□□□□ -0.25
TUBA4A-202ENST00000392088 CHCHD10Q8WYQ3 142 aaPredicted RBP13.46□□□□□ -0.26
TUBA4A-202ENST00000392088 A0A1B0GX51 115 aa13.45□□□□□ -0.26
TUBA4A-202ENST00000392088 DEFB4AO15263 64 aa13.45□□□□□ -0.26
TUBA4A-202ENST00000392088 CD164L2Q6UWJ8 174 aa13.45□□□□□ -0.26
TUBA4A-202ENST00000392088 hADV29S1A0JD25 119 aa13.44□□□□□ -0.26
TUBA4A-202ENST00000392088 CRYGAP11844 174 aa13.44□□□□□ -0.26
TUBA4A-202ENST00000392088 CFAP161Q6P656 301 aa13.44□□□□□ -0.26
TUBA4A-202ENST00000392088 NDUFC2O95298 119 aa13.43□□□□□ -0.26
TUBA4A-202ENST00000392088 LINC00482Q8N8I6 264 aa13.42□□□□□ -0.26
TUBA4A-202ENST00000392088 ANGP03950 147 aaKnown RBP13.42□□□□□ -0.26
TUBA4A-202ENST00000392088 SPATA3Q8NHX4 192 aa13.42□□□□□ -0.26
TUBA4A-202ENST00000392088 C6orf99Q4VX62 202 aa13.41□□□□□ -0.26
TUBA4A-202ENST00000392088 TENM4Q6N022 2769 aa13.41□□□□□ -0.26
TUBA4A-202ENST00000392088 REG3AQ06141 175 aa13.4□□□□□ -0.26
TUBA4A-202ENST00000392088 COX17Q14061 63 aa13.4□□□□□ -0.26
TUBA4A-202ENST00000392088 VWFP04275 2813 aa13.39□□□□□ -0.27
TUBA4A-202ENST00000392088 IGHV4-28A0A0C4DH34 117 aa13.39□□□□□ -0.27
TUBA4A-202ENST00000392088 JMJD7-PLA2G4BH0Y9G9 81 aa13.39□□□□□ -0.27
TUBA4A-202ENST00000392088 TMEM256-PLSCR3K7ERE1 68 aa13.39□□□□□ -0.27
TUBA4A-202ENST00000392088 USP17L23D6RBM5 183 aa13.39□□□□□ -0.27
TUBA4A-202ENST00000392088 HILS1P60008 231 aa13.39□□□□□ -0.27
TUBA4A-202ENST00000392088 C10orf25Q5T742 122 aa13.39□□□□□ -0.27
TUBA4A-202ENST00000392088 WFDC9Q8NEX5 89 aa13.39□□□□□ -0.27
TUBA4A-202ENST00000392088 ITPR2Q14571 2701 aa13.38□□□□□ -0.27
TUBA4A-202ENST00000392088 C6orf223Q8N319 242 aa13.38□□□□□ -0.27
TUBA4A-202ENST00000392088 LOC107984640A0A0U1RRK4 108 aa13.38□□□□□ -0.27
TUBA4A-202ENST00000392088 SMIM9A6NGZ8 99 aa13.37□□□□□ -0.27
TUBA4A-202ENST00000392088 DEFB135Q30KP9 77 aa13.36□□□□□ -0.27
TUBA4A-202ENST00000392088 SERP2Q8N6R1 65 aa13.36□□□□□ -0.27
TUBA4A-202ENST00000392088 UNQ6190/PRO20217Q6UXQ8 127 aa13.36□□□□□ -0.27
TUBA4A-202ENST00000392088 UPK3BQ9BT76 320 aa13.36□□□□□ -0.27
TUBA4A-202ENST00000392088 LYRM9A8MSI8 78 aa13.35□□□□□ -0.27
TUBA4A-202ENST00000392088 LINC00575Q6W349 94 aa13.34□□□□□ -0.27
TUBA4A-202ENST00000392088 S100A7L2Q5SY68 101 aa13.34□□□□□ -0.27
TUBA4A-202ENST00000392088 FAM19A1Q7Z5A9 133 aa13.33□□□□□ -0.28
TUBA4A-202ENST00000392088 SMR3AQ99954 134 aa13.33□□□□□ -0.28
TUBA4A-202ENST00000392088 CELA1Q9UNI1 258 aa13.32□□□□□ -0.28
TUBA4A-202ENST00000392088 SPAG11BQ08648 103 aa13.31□□□□□ -0.28
TUBA4A-202ENST00000392088 LYPD5Q6UWN5 251 aa13.3□□□□□ -0.28
TUBA4A-202ENST00000392088 ENHOQ6UWT2 76 aa13.3□□□□□ -0.28
TUBA4A-202ENST00000392088 DAD1P61803 113 aa13.3□□□□□ -0.28
TUBA4A-202ENST00000392088 M0R2N4 97 aa13.29□□□□□ -0.28
TUBA4A-202ENST00000392088 TRAV23DV6A0A075B6W5 121 aa13.28□□□□□ -0.28
TUBA4A-202ENST00000392088 CYSRT1A8MQ03 144 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms