RNA–Protein interactions for RNA: ENST00000391941.6

ERCC2-201, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC2, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-201ENST00000391941 Q8N3U1 123 aa12.59□□□□□ -0.39
ERCC2-201ENST00000391941 C3orf22Q8N5N4 141 aa12.59□□□□□ -0.39
ERCC2-201ENST00000391941 ITPR2Q14571 2701 aa12.58□□□□□ -0.4
ERCC2-201ENST00000391941 hADV29S1A0JD25 119 aa12.58□□□□□ -0.4
ERCC2-201ENST00000391941 IGHV3OR16-9A0A0B4J2B5 98 aa12.57□□□□□ -0.4
ERCC2-201ENST00000391941 ESM1Q9NQ30 184 aa12.57□□□□□ -0.4
ERCC2-201ENST00000391941 LRRC75A-AS1Q8N1F1 130 aa12.56□□□□□ -0.4
ERCC2-201ENST00000391941 IGLV10-54A0A075B6I4 117 aa12.55□□□□□ -0.4
ERCC2-201ENST00000391941 WIPF1O43516 503 aa12.55□□□□□ -0.4
ERCC2-201ENST00000391941 CXCL5P42830 114 aa12.55□□□□□ -0.4
ERCC2-201ENST00000391941 C9orf116Q5BN46 136 aaPredicted RBP12.55□□□□□ -0.4
ERCC2-201ENST00000391941 C6orf226Q5I0X4 101 aa12.55□□□□□ -0.4
ERCC2-201ENST00000391941 TRBV6-8A0A0A6YYG3 113 aa12.54□□□□□ -0.4
ERCC2-201ENST00000391941 F8WDY8 70 aa12.54□□□□□ -0.4
ERCC2-201ENST00000391941 HILS1P60008 231 aa12.54□□□□□ -0.4
ERCC2-201ENST00000391941 TMEM126AQ9H061 195 aa12.54□□□□□ -0.4
ERCC2-201ENST00000391941 DNAJC9-AS1A6NH13 148 aa12.53□□□□□ -0.4
ERCC2-201ENST00000391941 TRBV6-4A0A1B0GX49 114 aa12.53□□□□□ -0.4
ERCC2-201ENST00000391941 C2orf48Q96LS8 159 aa12.53□□□□□ -0.4
ERCC2-201ENST00000391941 TENM4Q6N022 2769 aa12.53□□□□□ -0.4
ERCC2-201ENST00000391941 FHL2Q14192 279 aa12.52□□□□□ -0.4
ERCC2-201ENST00000391941 C16orf74Q96GX8 76 aa12.52□□□□□ -0.4
ERCC2-201ENST00000391941 DEFB4AO15263 64 aa12.52□□□□□ -0.41
ERCC2-201ENST00000391941 A0A1B0GX51 115 aa12.52□□□□□ -0.41
ERCC2-201ENST00000391941 UQCRQO14949 82 aa12.52□□□□□ -0.41
ERCC2-201ENST00000391941 HIST1H4AP62805 103 aaKnown RBP12.51□□□□□ -0.41
ERCC2-201ENST00000391941 SS18Q15532 418 aa12.51□□□□□ -0.41
ERCC2-201ENST00000391941 LINC00526Q96FQ7 95 aa12.51□□□□□ -0.41
ERCC2-201ENST00000391941 OVOL2Q9BRP0 275 aa12.51□□□□□ -0.41
ERCC2-201ENST00000391941 A0A087WZ39 114 aa12.5□□□□□ -0.41
ERCC2-201ENST00000391941 LINC00959A0A1B0GUT2 108 aa12.5□□□□□ -0.41
ERCC2-201ENST00000391941 IBA57-AS1B1ANH7 110 aa12.5□□□□□ -0.41
ERCC2-201ENST00000391941 BBC3Q96PG8 261 aaPredicted RBP12.5□□□□□ -0.41
ERCC2-201ENST00000391941 WFDC11Q8NEX6 87 aa12.5□□□□□ -0.41
ERCC2-201ENST00000391941 KIR2DL5BQ8NHK3 375 aa12.5□□□□□ -0.41
ERCC2-201ENST00000391941 H0YGX0 51 aa12.49□□□□□ -0.41
ERCC2-201ENST00000391941 LINC01561Q8N1V8 128 aa12.49□□□□□ -0.41
ERCC2-201ENST00000391941 COX7CP15954 63 aa12.48□□□□□ -0.41
ERCC2-201ENST00000391941 DEFB113Q30KQ7 82 aa12.48□□□□□ -0.41
ERCC2-201ENST00000391941 Q8NDZ9 215 aa12.48□□□□□ -0.41
ERCC2-201ENST00000391941 GYPEP15421 78 aa12.47□□□□□ -0.41
ERCC2-201ENST00000391941 NOTCH2Q04721 2471 aa12.46□□□□□ -0.41
ERCC2-201ENST00000391941 CSNK1G2-AS1Q8NCQ2 148 aa12.46□□□□□ -0.41
ERCC2-201ENST00000391941 SPATA3Q8NHX4 192 aa12.46□□□□□ -0.41
ERCC2-201ENST00000391941 OBSCN-AS1Q96MR7 158 aa12.46□□□□□ -0.41
ERCC2-201ENST00000391941 TENM1Q9UKZ4 2725 aa12.46□□□□□ -0.42
ERCC2-201ENST00000391941 C19orf73Q9NVV2 129 aa12.45□□□□□ -0.42
ERCC2-201ENST00000391941 NANOS2P60321 138 aaKnown RBP12.44□□□□□ -0.42
ERCC2-201ENST00000391941 TRRAPQ9Y4A5 3859 aa12.44□□□□□ -0.42
ERCC2-201ENST00000391941 FAM19A1Q7Z5A9 133 aa12.44□□□□□ -0.42
ERCC2-201ENST00000391941 LINC00269Q8N2A0 174 aa12.43□□□□□ -0.42
ERCC2-201ENST00000391941 RPL18AQ02543 176 aaKnown RBP12.43□□□□□ -0.42
ERCC2-201ENST00000391941 ANK3Q12955 4377 aaKnown RBP12.42□□□□□ -0.42
ERCC2-201ENST00000391941 TRAV23DV6A0A075B6W5 121 aa12.42□□□□□ -0.42
ERCC2-201ENST00000391941 KRTAP1-3Q8IUG1 177 aa12.42□□□□□ -0.42
ERCC2-201ENST00000391941 TMEM86BQ8N661 226 aa12.42□□□□□ -0.42
ERCC2-201ENST00000391941 ORMDL1Q9P0S3 153 aa12.42□□□□□ -0.42
ERCC2-201ENST00000391941 DSCR8Q96T75 97 aa12.42□□□□□ -0.42
ERCC2-201ENST00000391941 PKD1L1Q8TDX9 2849 aa12.42□□□□□ -0.42
ERCC2-201ENST00000391941 ATOX1O00244 68 aa12.41□□□□□ -0.42
ERCC2-201ENST00000391941 USP17L23D6RBM5 183 aa12.41□□□□□ -0.42
ERCC2-201ENST00000391941 LINC01006Q8NI28 216 aa12.4□□□□□ -0.42
ERCC2-201ENST00000391941 M0R2N4 97 aa12.4□□□□□ -0.42
ERCC2-201ENST00000391941 LY6G6DO95868 133 aa12.4□□□□□ -0.42
ERCC2-201ENST00000391941 Q6JHZ5 121 aa12.4□□□□□ -0.43
ERCC2-201ENST00000391941 C6orf223Q8N319 242 aa12.4□□□□□ -0.43
ERCC2-201ENST00000391941 IGLV1-51P01701 117 aa12.39□□□□□ -0.43
ERCC2-201ENST00000391941 ENHOQ6UWT2 76 aa12.39□□□□□ -0.43
ERCC2-201ENST00000391941 FAM19A5Q7Z5A7 132 aaPredicted RBP12.38□□□□□ -0.43
ERCC2-201ENST00000391941 LINC00482Q8N8I6 264 aa12.38□□□□□ -0.43
ERCC2-201ENST00000391941 C6orf99Q4VX62 202 aa12.38□□□□□ -0.43
ERCC2-201ENST00000391941 CMC4P56277 68 aaPredicted RBP12.37□□□□□ -0.43
ERCC2-201ENST00000391941 CRYGAP11844 174 aa12.37□□□□□ -0.43
ERCC2-201ENST00000391941 PDZD2O15018 2839 aa12.37□□□□□ -0.43
ERCC2-201ENST00000391941 Q8N814 137 aa12.36□□□□□ -0.43
ERCC2-201ENST00000391941 OXTP01178 125 aa12.36□□□□□ -0.43
ERCC2-201ENST00000391941 C10orf25Q5T742 122 aa12.36□□□□□ -0.43
ERCC2-201ENST00000391941 UNC79Q9P2D8 2635 aa12.35□□□□□ -0.43
ERCC2-201ENST00000391941 Q8IZM0 81 aa12.35□□□□□ -0.43
ERCC2-201ENST00000391941 ANGP03950 147 aaKnown RBP12.34□□□□□ -0.43
ERCC2-201ENST00000391941 CCKP06307 115 aa12.34□□□□□ -0.43
ERCC2-201ENST00000391941 FASNP49327 2511 aaKnown RBP12.34□□□□□ -0.43
ERCC2-201ENST00000391941 HIVEP1P15822 2718 aa12.34□□□□□ -0.43
ERCC2-201ENST00000391941 SERP2Q8N6R1 65 aa12.32□□□□□ -0.44
ERCC2-201ENST00000391941 UPK3BQ9BT76 320 aa12.32□□□□□ -0.44
ERCC2-201ENST00000391941 CHCHD10Q8WYQ3 142 aaPredicted RBP12.32□□□□□ -0.44
ERCC2-201ENST00000391941 SMIM9A6NGZ8 99 aa12.31□□□□□ -0.44
ERCC2-201ENST00000391941 KIAA0087Q14695 138 aa12.31□□□□□ -0.44
ERCC2-201ENST00000391941 TEP1Q99973 2627 aaKnown RBP12.31□□□□□ -0.44
ERCC2-201ENST00000391941 A0A1B0GUV1 79 aa12.31□□□□□ -0.44
ERCC2-201ENST00000391941 HTN3P15516 51 aa12.31□□□□□ -0.44
ERCC2-201ENST00000391941 UNQ6190/PRO20217Q6UXQ8 127 aa12.31□□□□□ -0.44
ERCC2-201ENST00000391941 GHRHP01286 108 aa12.3□□□□□ -0.44
ERCC2-201ENST00000391941 LINC00167Q96N53 147 aa12.3□□□□□ -0.44
ERCC2-201ENST00000391941 HELZ2Q9BYK8 2649 aaKnown RBP12.3□□□□□ -0.44
ERCC2-201ENST00000391941 J3KT08 172 aa12.29□□□□□ -0.44
ERCC2-201ENST00000391941 ATRQ13535 2644 aa12.29□□□□□ -0.44
ERCC2-201ENST00000391941 S100A7L2Q5SY68 101 aa12.28□□□□□ -0.44
ERCC2-201ENST00000391941 SMR3AQ99954 134 aa12.28□□□□□ -0.44
ERCC2-201ENST00000391941 OTOGQ6ZRI0 2925 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 104.1 ms