RNA–Protein interactions for RNA: ENST00000391303.1

RNU1-56P-201, Transcript of RNA, U1 small nuclear 56, pseudogene, humanhuman

BASIC

Gene RNU1-56P, Length 164 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-56P-201ENST00000391303 RPL13AP40429 203 aaKnown RBP4.29□□□□□ -1.72
RNU1-56P-201ENST00000391303 C2orf82Q6UX34 121 aa4.29□□□□□ -1.72
RNU1-56P-201ENST00000391303 SEC11CQ9BY50 192 aa4.29□□□□□ -1.72
RNU1-56P-201ENST00000391303 CARHSP1Q9Y2V2 147 aaKnown RBP4.29□□□□□ -1.72
RNU1-56P-201ENST00000391303 IGLV5-45A0A087WSX0 123 aa4.28□□□□□ -1.72
RNU1-56P-201ENST00000391303 TINCRA0A1B0GVN0 87 aa4.28□□□□□ -1.72
RNU1-56P-201ENST00000391303 UBE2BP63146 152 aa4.28□□□□□ -1.72
RNU1-56P-201ENST00000391303 PDZD11Q5EBL8 140 aa4.28□□□□□ -1.72
RNU1-56P-201ENST00000391303 C9orf129Q5T035 196 aaKnown RBP4.28□□□□□ -1.72
RNU1-56P-201ENST00000391303 FAM19A5Q7Z5A7 132 aaPredicted RBP4.28□□□□□ -1.72
RNU1-56P-201ENST00000391303 SCGB3A1Q96QR1 104 aa4.28□□□□□ -1.72
RNU1-56P-201ENST00000391303 MRPL18Q9H0U6 180 aaKnown RBP4.28□□□□□ -1.72
RNU1-56P-201ENST00000391303 CDKN2A-AS1Q9UH64 79 aa4.28□□□□□ -1.72
RNU1-56P-201ENST00000391303 FAM168BA1KXE4 195 aa4.27□□□□□ -1.73
RNU1-56P-201ENST00000391303 ZNF861PO60384 105 aa4.27□□□□□ -1.73
RNU1-56P-201ENST00000391303 KRTAP7-1Q8IUC3 87 aa4.27□□□□□ -1.73
RNU1-56P-201ENST00000391303 TOMM7Q9P0U1 55 aa4.27□□□□□ -1.73
RNU1-56P-201ENST00000391303 SMIM1B2RUZ4 78 aa4.26□□□□□ -1.73
RNU1-56P-201ENST00000391303 H3BRM9 83 aa4.26□□□□□ -1.73
RNU1-56P-201ENST00000391303 ADCYAP1P18509 176 aa4.26□□□□□ -1.73
RNU1-56P-201ENST00000391303 PMVKQ15126 192 aa4.26□□□□□ -1.73
RNU1-56P-201ENST00000391303 RHEBQ15382 184 aa4.26□□□□□ -1.73
RNU1-56P-201ENST00000391303 SFTA2Q6UW10 78 aa4.26□□□□□ -1.73
RNU1-56P-201ENST00000391303 LINC00469Q8N7U9 141 aa4.26□□□□□ -1.73
RNU1-56P-201ENST00000391303 CST9LQ9H4G1 147 aa4.26□□□□□ -1.73
RNU1-56P-201ENST00000391303 C22orf24Q9Y442 160 aa4.26□□□□□ -1.73
RNU1-56P-201ENST00000391303 PKHD1L1Q86WI1 4243 aa4.26□□□□□ -1.73
RNU1-56P-201ENST00000391303 IGLV5-37A0A075B6J1 123 aa4.25□□□□□ -1.73
RNU1-56P-201ENST00000391303 KRTAP1-4P0C5Y4 121 aa4.25□□□□□ -1.73
RNU1-56P-201ENST00000391303 RPL28P46779 137 aaKnown RBP4.25□□□□□ -1.73
RNU1-56P-201ENST00000391303 C10orf91Q5T1B1 145 aa4.25□□□□□ -1.73
RNU1-56P-201ENST00000391303 ZC2HC1BQ5TFG8 222 aa4.25□□□□□ -1.73
RNU1-56P-201ENST00000391303 FA2HQ7L5A8 372 aa4.25□□□□□ -1.73
RNU1-56P-201ENST00000391303 MRPL55Q7Z7F7 128 aaKnown RBP4.25□□□□□ -1.73
RNU1-56P-201ENST00000391303 KRTAP11-1Q8IUC1 163 aa4.25□□□□□ -1.73
RNU1-56P-201ENST00000391303 PRR26Q8N8Z3 221 aa4.25□□□□□ -1.73
RNU1-56P-201ENST00000391303 SMCO4Q9NRQ5 59 aa4.25□□□□□ -1.73
RNU1-56P-201ENST00000391303 BCE1O60756 84 aa4.24□□□□□ -1.73
RNU1-56P-201ENST00000391303 ATP5LO75964 103 aa4.24□□□□□ -1.73
RNU1-56P-201ENST00000391303 CTAG1AP78358 180 aa4.24□□□□□ -1.73
RNU1-56P-201ENST00000391303 KIAA1644Q3SXP7 199 aa4.24□□□□□ -1.73
RNU1-56P-201ENST00000391303 COX7B2Q8TF08 81 aa4.24□□□□□ -1.73
RNU1-56P-201ENST00000391303 XAGE1AQ9HD64 81 aa4.24□□□□□ -1.73
RNU1-56P-201ENST00000391303 UBR4Q5T4S7 5183 aa4.24□□□□□ -1.73
RNU1-56P-201ENST00000391303 IGLV5-39A0A0G2JS06 123 aa4.23□□□□□ -1.73
RNU1-56P-201ENST00000391303 IGLC3P0DOY3 106 aa4.23□□□□□ -1.73
RNU1-56P-201ENST00000391303 RAB5BP61020 215 aa4.23□□□□□ -1.73
RNU1-56P-201ENST00000391303 IFITM2Q01629 132 aa4.23□□□□□ -1.73
RNU1-56P-201ENST00000391303 FABP9Q0Z7S8 132 aa4.23□□□□□ -1.73
RNU1-56P-201ENST00000391303 COX17Q14061 63 aa4.23□□□□□ -1.73
RNU1-56P-201ENST00000391303 LINC00614P0C842 121 aa4.22□□□□□ -1.73
RNU1-56P-201ENST00000391303 HBDP02042 147 aa4.21□□□□□ -1.74
RNU1-56P-201ENST00000391303 NDUFA5Q16718 116 aa4.21□□□□□ -1.74
RNU1-56P-201ENST00000391303 COMMD7Q86VX2 200 aa4.21□□□□□ -1.74
RNU1-56P-201ENST00000391303 NKAPP1Q8N9T2 125 aa4.21□□□□□ -1.74
RNU1-56P-201ENST00000391303 RPS10P5Q9NQ39 176 aa4.21□□□□□ -1.74
RNU1-56P-201ENST00000391303 SPINK8P0C7L1 97 aa4.2□□□□□ -1.74
RNU1-56P-201ENST00000391303 CRYGAP11844 174 aa4.2□□□□□ -1.74
RNU1-56P-201ENST00000391303 RPL24P83731 157 aaKnown RBP4.2□□□□□ -1.74
RNU1-56P-201ENST00000391303 FAM229BQ4G0N7 80 aa4.2□□□□□ -1.74
RNU1-56P-201ENST00000391303 C18orf32Q8TCD1 76 aa4.2□□□□□ -1.74
RNU1-56P-201ENST00000391303 LINC00167Q96N53 147 aa4.2□□□□□ -1.74
RNU1-56P-201ENST00000391303 TRAPPC1Q9Y5R8 145 aa4.2□□□□□ -1.74
RNU1-56P-201ENST00000391303 TNXBP22105 4242 aa4.19□□□□□ -1.74
RNU1-56P-201ENST00000391303 A0A096LNJ9 63 aa4.19□□□□□ -1.74
RNU1-56P-201ENST00000391303 SNAPINO95295 136 aa4.19□□□□□ -1.74
RNU1-56P-201ENST00000391303 ZNF22P17026 224 aaPredicted RBP4.19□□□□□ -1.74
RNU1-56P-201ENST00000391303 KRTAP13-1Q8IUC0 172 aa4.19□□□□□ -1.74
RNU1-56P-201ENST00000391303 SVBPQ8N300 66 aa4.19□□□□□ -1.74
RNU1-56P-201ENST00000391303 ERG28Q9UKR5 140 aa4.19□□□□□ -1.74
RNU1-56P-201ENST00000391303 LINC00587B1AMM8 73 aa4.18□□□□□ -1.74
RNU1-56P-201ENST00000391303 UBE2AP49459 152 aa4.18□□□□□ -1.74
RNU1-56P-201ENST00000391303 BAGE3Q86Y29 109 aa4.18□□□□□ -1.74
RNU1-56P-201ENST00000391303 CHCHD1Q96BP2 118 aaKnown RBP4.18□□□□□ -1.74
RNU1-56P-201ENST00000391303 TRAV12-1A0A0B4J245 112 aa4.17□□□□□ -1.74
RNU1-56P-201ENST00000391303 RPL37AP8A6NKH3 93 aa4.17□□□□□ -1.74
RNU1-56P-201ENST00000391303 VPREB1P12018 145 aa4.17□□□□□ -1.74
RNU1-56P-201ENST00000391303 NDUFA6P56556 154 aa4.17□□□□□ -1.74
RNU1-56P-201ENST00000391303 TYMSOSQ8TAI1 123 aa4.17□□□□□ -1.74
RNU1-56P-201ENST00000391303 URB1-AS1Q96HZ7 61 aa4.17□□□□□ -1.74
RNU1-56P-201ENST00000391303 SND1-IT1Q9HBX3 110 aa4.17□□□□□ -1.74
RNU1-56P-201ENST00000391303 LRP2P98164 4655 aa4.17□□□□□ -1.74
RNU1-56P-201ENST00000391303 APOC3P02656 99 aa4.16□□□□□ -1.74
RNU1-56P-201ENST00000391303 PFN2P35080 140 aa4.16□□□□□ -1.74
RNU1-56P-201ENST00000391303 HERV-K104P63124 156 aa4.16□□□□□ -1.74
RNU1-56P-201ENST00000391303 TMEM170BQ5T4T1 132 aa4.16□□□□□ -1.74
RNU1-56P-201ENST00000391303 ZNF625Q96I27 306 aaPredicted RBP4.16□□□□□ -1.74
RNU1-56P-201ENST00000391303 TMEM126AQ9H061 195 aa4.16□□□□□ -1.74
RNU1-56P-201ENST00000391303 A0A087X002 238 aa4.15□□□□□ -1.75
RNU1-56P-201ENST00000391303 IGKV2D-26A0A0A0MRZ7 120 aa4.15□□□□□ -1.75
RNU1-56P-201ENST00000391303 GAGE10A6NGK3 116 aa4.15□□□□□ -1.75
RNU1-56P-201ENST00000391303 C11orf86A6NJI1 115 aa4.15□□□□□ -1.75
RNU1-56P-201ENST00000391303 PRR4Q16378 134 aa4.15□□□□□ -1.75
RNU1-56P-201ENST00000391303 CHTOPQ9Y3Y2 248 aaKnown RBP4.15□□□□□ -1.75
RNU1-56P-201ENST00000391303 IGKV2-28A0A075B6P5 120 aa4.14□□□□□ -1.75
RNU1-56P-201ENST00000391303 A0A0U1RQV1 116 aa4.14□□□□□ -1.75
RNU1-56P-201ENST00000391303 TMEM223A0PJW6 202 aa4.14□□□□□ -1.75
RNU1-56P-201ENST00000391303 M0R378 163 aa4.14□□□□□ -1.75
RNU1-56P-201ENST00000391303 IGKV2D-28P01615 120 aa4.14□□□□□ -1.75
RNU1-56P-201ENST00000391303 SPAG11AQ6PDA7 123 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 103.5 ms