RNA–Protein interactions for RNA: ENST00000390993.1

SNORD28B-201, Transcript of small nucleolar RNA, C/D box 28B, humanhuman

BASIC

Gene SNORD28B, Length 75 nt, Biotype snoRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28B-201ENST00000390993 TROQ12816 1431 aaPredicted RBP-1.05□□□□□ -2.58
SNORD28B-201ENST00000390993 C9orf92A6NGG3 77 aa-1.05□□□□□ -2.58
SNORD28B-201ENST00000390993 SNCAP37840 140 aa-1.05□□□□□ -2.58
SNORD28B-201ENST00000390993 PYDC1Q8WXC3 89 aa-1.05□□□□□ -2.58
SNORD28B-201ENST00000390993 CDC42SE2Q9NRR3 84 aa-1.05□□□□□ -2.58
SNORD28B-201ENST00000390993 CDKN2A-AS1Q9UH64 79 aa-1.05□□□□□ -2.58
SNORD28B-201ENST00000390993 COL4A6Q14031 1691 aa-1.05□□□□□ -2.58
SNORD28B-201ENST00000390993 ADAMTS12P58397 1594 aa-1.05□□□□□ -2.58
SNORD28B-201ENST00000390993 REV3LO60673 3130 aa-1.05□□□□□ -2.58
SNORD28B-201ENST00000390993 NKTRP30414 1462 aaKnown RBP-1.05□□□□□ -2.58
SNORD28B-201ENST00000390993 C1orf167Q5SNV9 1468 aa-1.05□□□□□ -2.58
SNORD28B-201ENST00000390993 MYOM1P52179 1685 aa-1.06□□□□□ -2.58
SNORD28B-201ENST00000390993 A0A1B0GU69 56 aa-1.06□□□□□ -2.58
SNORD28B-201ENST00000390993 LOC100130705A0A1B0GUX0 176 aa-1.06□□□□□ -2.58
SNORD28B-201ENST00000390993 Q56UQ5 140 aa-1.06□□□□□ -2.58
SNORD28B-201ENST00000390993 COMMD6Q7Z4G1 85 aa-1.06□□□□□ -2.58
SNORD28B-201ENST00000390993 DMXL1Q9Y485 3027 aa-1.06□□□□□ -2.58
SNORD28B-201ENST00000390993 CPSF1Q10570 1443 aaKnown RBP-1.06□□□□□ -2.58
SNORD28B-201ENST00000390993 TRANK1O15050 2925 aa-1.07□□□□□ -2.58
SNORD28B-201ENST00000390993 PSME4Q14997 1843 aa-1.07□□□□□ -2.58
SNORD28B-201ENST00000390993 AKAP13Q12802 2813 aa-1.07□□□□□ -2.58
SNORD28B-201ENST00000390993 COX6CP09669 75 aa-1.07□□□□□ -2.58
SNORD28B-201ENST00000390993 TRAPPC2P0DI81 140 aa-1.07□□□□□ -2.58
SNORD28B-201ENST00000390993 TRAPPC2BP0DI82 140 aa-1.07□□□□□ -2.58
SNORD28B-201ENST00000390993 SAA2P0DJI9 122 aaPredicted RBP-1.07□□□□□ -2.58
SNORD28B-201ENST00000390993 ARPC4P59998 168 aa-1.07□□□□□ -2.58
SNORD28B-201ENST00000390993 LSM10Q969L4 123 aaKnown RBP-1.07□□□□□ -2.58
SNORD28B-201ENST00000390993 XRN1Q8IZH2 1706 aaKnown RBP-1.07□□□□□ -2.58
SNORD28B-201ENST00000390993 PLECQ15149 4684 aaKnown RBP-1.07□□□□□ -2.58
SNORD28B-201ENST00000390993 QRICH2Q9H0J4 1663 aa-1.07□□□□□ -2.58
SNORD28B-201ENST00000390993 SMG6Q86US8 1419 aaKnown RBP-1.07□□□□□ -2.58
SNORD28B-201ENST00000390993 TCHHQ07283 1943 aa-1.08□□□□□ -2.58
SNORD28B-201ENST00000390993 MIF4GDA9UHW6 222 aaKnown RBP-1.08□□□□□ -2.58
SNORD28B-201ENST00000390993 F6UZH7 168 aa-1.08□□□□□ -2.58
SNORD28B-201ENST00000390993 DEFA5Q01523 94 aa-1.08□□□□□ -2.58
SNORD28B-201ENST00000390993 C5orf38Q86SI9 138 aa-1.08□□□□□ -2.58
SNORD28B-201ENST00000390993 LCN9Q8WX39 176 aa-1.08□□□□□ -2.58
SNORD28B-201ENST00000390993 MRPL34Q9BQ48 92 aaKnown RBP-1.08□□□□□ -2.58
SNORD28B-201ENST00000390993 LINC00846Q9NV44 126 aa-1.08□□□□□ -2.58
SNORD28B-201ENST00000390993 HIGD1BQ9P298 99 aa-1.08□□□□□ -2.58
SNORD28B-201ENST00000390993 GRIN2AQ12879 1464 aa-1.08□□□□□ -2.58
SNORD28B-201ENST00000390993 DNAH1Q9P2D7 4330 aa-1.08□□□□□ -2.58
SNORD28B-201ENST00000390993 ANKRD50Q9ULJ7 1429 aa-1.08□□□□□ -2.58
SNORD28B-201ENST00000390993 KALRNO60229 2985 aa-1.08□□□□□ -2.58
SNORD28B-201ENST00000390993 ANK3Q12955 4377 aaKnown RBP-1.09□□□□□ -2.58
SNORD28B-201ENST00000390993 TET3O43151 1660 aa-1.09□□□□□ -2.58
SNORD28B-201ENST00000390993 PLEKHH2Q8IVE3 1493 aa-1.09□□□□□ -2.58
SNORD28B-201ENST00000390993 FAM25AB3EWG3 89 aa-1.09□□□□□ -2.58
SNORD28B-201ENST00000390993 FAM25CB3EWG5 89 aa-1.09□□□□□ -2.58
SNORD28B-201ENST00000390993 FAM25GB3EWG6 89 aa-1.09□□□□□ -2.58
SNORD28B-201ENST00000390993 APOC2P02655 101 aa-1.09□□□□□ -2.58
SNORD28B-201ENST00000390993 SMIM21Q3B7S5 101 aa-1.09□□□□□ -2.58
SNORD28B-201ENST00000390993 WFDC13Q8IUB5 93 aa-1.09□□□□□ -2.58
SNORD28B-201ENST00000390993 ANP32BQ92688 251 aaKnown RBP-1.09□□□□□ -2.58
SNORD28B-201ENST00000390993 C12orf57Q99622 126 aa-1.09□□□□□ -2.58
SNORD28B-201ENST00000390993 PAIP2BQ9ULR5 123 aaKnown RBP-1.09□□□□□ -2.58
SNORD28B-201ENST00000390993 RNF213Q63HN8 5207 aa-1.09□□□□□ -2.58
SNORD28B-201ENST00000390993 PDE4DIPQ5VU43 2346 aa-1.09□□□□□ -2.58
SNORD28B-201ENST00000390993 ANKRD11Q6UB99 2663 aaPredicted RBP-1.09□□□□□ -2.58
SNORD28B-201ENST00000390993 CLIP1P30622 1438 aa-1.09□□□□□ -2.58
SNORD28B-201ENST00000390993 NAIPQ13075 1403 aa-1.09□□□□□ -2.58
SNORD28B-201ENST00000390993 EHBP1L1Q8N3D4 1523 aa-1.1□□□□□ -2.58
SNORD28B-201ENST00000390993 DR1Q01658 176 aa-1.1□□□□□ -2.59
SNORD28B-201ENST00000390993 CATR1Q13166 79 aa-1.1□□□□□ -2.59
SNORD28B-201ENST00000390993 MEIG1Q5JSS6 88 aa-1.1□□□□□ -2.59
SNORD28B-201ENST00000390993 VAMP8Q9BV40 100 aa-1.1□□□□□ -2.59
SNORD28B-201ENST00000390993 MANBALQ9NQG1 85 aa-1.1□□□□□ -2.59
SNORD28B-201ENST00000390993 EDC4Q6P2E9 1401 aaKnown RBP-1.1□□□□□ -2.59
SNORD28B-201ENST00000390993 MGAM2Q2M2H8 2515 aa-1.1□□□□□ -2.59
SNORD28B-201ENST00000390993 DNAH11Q96DT5 4516 aa-1.1□□□□□ -2.59
SNORD28B-201ENST00000390993 SPTY2D1-AS1A0A0U1RR47 76 aa-1.11□□□□□ -2.59
SNORD28B-201ENST00000390993 FAM223BA6NKX1 122 aa-1.11□□□□□ -2.59
SNORD28B-201ENST00000390993 H3BQF6 201 aa-1.11□□□□□ -2.59
SNORD28B-201ENST00000390993 ATP5EP56381 51 aaPredicted RBP-1.11□□□□□ -2.59
SNORD28B-201ENST00000390993 GNG11P61952 73 aa-1.11□□□□□ -2.59
SNORD28B-201ENST00000390993 C6orf201Q7Z4U5 140 aa-1.11□□□□□ -2.59
SNORD28B-201ENST00000390993 PSENENQ9NZ42 101 aa-1.11□□□□□ -2.59
SNORD28B-201ENST00000390993 MTORP42345 2549 aa-1.11□□□□□ -2.59
SNORD28B-201ENST00000390993 CICQ96RK0 1608 aaPredicted RBP-1.11□□□□□ -2.59
SNORD28B-201ENST00000390993 NIPBLQ6KC79 2804 aaeCLIP-1.11□□□□□ -2.59
SNORD28B-201ENST00000390993 NLRP1Q9C000 1473 aa-1.12□□□□□ -2.59
SNORD28B-201ENST00000390993 UBE2L5PA0A1B0GUS4 154 aa-1.12□□□□□ -2.59
SNORD28B-201ENST00000390993 GNGT1P63211 74 aa-1.12□□□□□ -2.59
SNORD28B-201ENST00000390993 UBE2L3P68036 154 aaKnown RBP-1.12□□□□□ -2.59
SNORD28B-201ENST00000390993 PRO1854Q9UHT4 67 aa-1.12□□□□□ -2.59
SNORD28B-201ENST00000390993 ADGRL2O95490 1459 aa-1.12□□□□□ -2.59
SNORD28B-201ENST00000390993 ARHGEF5Q12774 1597 aa-1.13□□□□□ -2.59
SNORD28B-201ENST00000390993 MYH7P12883 1935 aa-1.13□□□□□ -2.59
SNORD28B-201ENST00000390993 RYR2Q92736 4967 aa-1.13□□□□□ -2.59
SNORD28B-201ENST00000390993 A0A0G2JND7 137 aa-1.13□□□□□ -2.59
SNORD28B-201ENST00000390993 SELENOWP63302 87 aa-1.13□□□□□ -2.59
SNORD28B-201ENST00000390993 NMSQ5H8A3 153 aa-1.13□□□□□ -2.59
SNORD28B-201ENST00000390993 PP6455Q8WZ26 134 aa-1.13□□□□□ -2.59
SNORD28B-201ENST00000390993 LINC00474Q9P2X8 69 aa-1.13□□□□□ -2.59
SNORD28B-201ENST00000390993 LRRC37AA6NMS7 1700 aa-1.13□□□□□ -2.59
SNORD28B-201ENST00000390993 DNAH7Q8WXX0 4024 aa-1.13□□□□□ -2.59
SNORD28B-201ENST00000390993 KTN1Q86UP2 1357 aaKnown RBP-1.13□□□□□ -2.59
SNORD28B-201ENST00000390993 APOBP04114 4563 aaKnown RBP-1.13□□□□□ -2.59
SNORD28B-201ENST00000390993 DNHD1Q96M86 4753 aa-1.13□□□□□ -2.59
SNORD28B-201ENST00000390993 PDCD11Q14690 1871 aaKnown RBP-1.14□□□□□ -2.59
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms