RNA–Protein interactions for RNA: ENST00000390357.3

TRBV4-1-201, Transcript of T cell receptor beta variable 4-1, humanhuman

APPRIS P1 BASIC

Gene TRBV4-1, Length 373 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV4-1-201ENST00000390357 LINC01546A6NGU7 62 aa8.28□□□□□ -1.08
TRBV4-1-201ENST00000390357 F8VRH5 84 aa8.28□□□□□ -1.08
TRBV4-1-201ENST00000390357 H0Y9J4 135 aa8.28□□□□□ -1.08
TRBV4-1-201ENST00000390357 LBHQ53QV2 105 aaPredicted RBP8.28□□□□□ -1.08
TRBV4-1-201ENST00000390357 SCGB3A1Q96QR1 104 aa8.28□□□□□ -1.08
TRBV4-1-201ENST00000390357 KIAA1644Q3SXP7 199 aa8.27□□□□□ -1.09
TRBV4-1-201ENST00000390357 C9orf129Q5T035 196 aaKnown RBP8.27□□□□□ -1.09
TRBV4-1-201ENST00000390357 ZC2HC1BQ5TFG8 222 aa8.27□□□□□ -1.09
TRBV4-1-201ENST00000390357 CDKN2A-AS1Q9UH64 79 aa8.27□□□□□ -1.09
TRBV4-1-201ENST00000390357 IGLV1-50A0A075B6I6 118 aa8.26□□□□□ -1.09
TRBV4-1-201ENST00000390357 TINCRA0A1B0GVN0 87 aa8.26□□□□□ -1.09
TRBV4-1-201ENST00000390357 NUPR1O60356 82 aa8.26□□□□□ -1.09
TRBV4-1-201ENST00000390357 PDZD11Q5EBL8 140 aa8.26□□□□□ -1.09
TRBV4-1-201ENST00000390357 KRTAP7-1Q8IUC3 87 aa8.26□□□□□ -1.09
TRBV4-1-201ENST00000390357 ADCYAP1P18509 176 aa8.25□□□□□ -1.09
TRBV4-1-201ENST00000390357 TP73-AS1Q9UF72 201 aa8.25□□□□□ -1.09
TRBV4-1-201ENST00000390357 KRTAP11-1Q8IUC1 163 aa8.24□□□□□ -1.09
TRBV4-1-201ENST00000390357 MRPL18Q9H0U6 180 aaKnown RBP8.24□□□□□ -1.09
TRBV4-1-201ENST00000390357 C22orf24Q9Y442 160 aa8.24□□□□□ -1.09
TRBV4-1-201ENST00000390357 TNXBP22105 4242 aa8.23□□□□□ -1.09
TRBV4-1-201ENST00000390357 IGLV5-45A0A087WSX0 123 aa8.23□□□□□ -1.09
TRBV4-1-201ENST00000390357 RPL13AP40429 203 aaKnown RBP8.23□□□□□ -1.09
TRBV4-1-201ENST00000390357 PMVKQ15126 192 aa8.23□□□□□ -1.09
TRBV4-1-201ENST00000390357 LINC00469Q8N7U9 141 aa8.23□□□□□ -1.09
TRBV4-1-201ENST00000390357 SMCO4Q9NRQ5 59 aa8.23□□□□□ -1.09
TRBV4-1-201ENST00000390357 CARHSP1Q9Y2V2 147 aaKnown RBP8.23□□□□□ -1.09
TRBV4-1-201ENST00000390357 ZNF861PO60384 105 aa8.22□□□□□ -1.09
TRBV4-1-201ENST00000390357 IFITM2Q01629 132 aa8.22□□□□□ -1.09
TRBV4-1-201ENST00000390357 FA2HQ7L5A8 372 aa8.22□□□□□ -1.09
TRBV4-1-201ENST00000390357 COX7B2Q8TF08 81 aa8.22□□□□□ -1.09
TRBV4-1-201ENST00000390357 CST9LQ9H4G1 147 aa8.22□□□□□ -1.09
TRBV4-1-201ENST00000390357 SMIM1B2RUZ4 78 aa8.21□□□□□ -1.1
TRBV4-1-201ENST00000390357 FABP9Q0Z7S8 132 aa8.21□□□□□ -1.1
TRBV4-1-201ENST00000390357 RHEBQ15382 184 aa8.21□□□□□ -1.1
TRBV4-1-201ENST00000390357 C10orf91Q5T1B1 145 aa8.21□□□□□ -1.1
TRBV4-1-201ENST00000390357 PRR26Q8N8Z3 221 aa8.21□□□□□ -1.1
TRBV4-1-201ENST00000390357 UBR4Q5T4S7 5183 aa8.2□□□□□ -1.1
TRBV4-1-201ENST00000390357 H3BRM9 83 aa8.2□□□□□ -1.1
TRBV4-1-201ENST00000390357 MRPL55Q7Z7F7 128 aaKnown RBP8.2□□□□□ -1.1
TRBV4-1-201ENST00000390357 XAGE1AQ9HD64 81 aa8.2□□□□□ -1.1
TRBV4-1-201ENST00000390357 KRTAP1-4P0C5Y4 121 aa8.18□□□□□ -1.1
TRBV4-1-201ENST00000390357 RPS10P5Q9NQ39 176 aa8.18□□□□□ -1.1
TRBV4-1-201ENST00000390357 ATP5LO75964 103 aa8.17□□□□□ -1.1
TRBV4-1-201ENST00000390357 LINC00614P0C842 121 aa8.17□□□□□ -1.1
TRBV4-1-201ENST00000390357 RPL28P46779 137 aaKnown RBP8.17□□□□□ -1.1
TRBV4-1-201ENST00000390357 COMMD7Q86VX2 200 aa8.17□□□□□ -1.1
TRBV4-1-201ENST00000390357 BCE1O60756 84 aa8.16□□□□□ -1.1
TRBV4-1-201ENST00000390357 RAB5BP61020 215 aa8.16□□□□□ -1.1
TRBV4-1-201ENST00000390357 TRAPPC1Q9Y5R8 145 aa8.16□□□□□ -1.1
TRBV4-1-201ENST00000390357 IGLV5-37A0A075B6J1 123 aa8.15□□□□□ -1.1
TRBV4-1-201ENST00000390357 IGLC3P0DOY3 106 aa8.15□□□□□ -1.1
TRBV4-1-201ENST00000390357 COX17Q14061 63 aa8.15□□□□□ -1.1
TRBV4-1-201ENST00000390357 SFTA2Q6UW10 78 aa8.15□□□□□ -1.1
TRBV4-1-201ENST00000390357 LINC00167Q96N53 147 aa8.15□□□□□ -1.1
TRBV4-1-201ENST00000390357 SPINK8P0C7L1 97 aa8.14□□□□□ -1.11
TRBV4-1-201ENST00000390357 HBDP02042 147 aa8.13□□□□□ -1.11
TRBV4-1-201ENST00000390357 NKAPP1Q8N9T2 125 aa8.13□□□□□ -1.11
TRBV4-1-201ENST00000390357 NDUFA6P56556 154 aa8.12□□□□□ -1.11
TRBV4-1-201ENST00000390357 C18orf32Q8TCD1 76 aa8.12□□□□□ -1.11
TRBV4-1-201ENST00000390357 LRP2P98164 4655 aa8.11□□□□□ -1.11
TRBV4-1-201ENST00000390357 IGLV5-39A0A0G2JS06 123 aa8.11□□□□□ -1.11
TRBV4-1-201ENST00000390357 RPL24P83731 157 aaKnown RBP8.11□□□□□ -1.11
TRBV4-1-201ENST00000390357 NDUFA5Q16718 116 aa8.11□□□□□ -1.11
TRBV4-1-201ENST00000390357 RPL37AP8A6NKH3 93 aa8.1□□□□□ -1.11
TRBV4-1-201ENST00000390357 SNAPINO95295 136 aa8.1□□□□□ -1.11
TRBV4-1-201ENST00000390357 CRYGAP11844 174 aa8.1□□□□□ -1.11
TRBV4-1-201ENST00000390357 A0A096LNJ9 63 aa8.09□□□□□ -1.11
TRBV4-1-201ENST00000390357 ZNF22P17026 224 aaPredicted RBP8.09□□□□□ -1.11
TRBV4-1-201ENST00000390357 BAGE3Q86Y29 109 aa8.09□□□□□ -1.11
TRBV4-1-201ENST00000390357 SVBPQ8N300 66 aa8.09□□□□□ -1.11
TRBV4-1-201ENST00000390357 URB1-AS1Q96HZ7 61 aa8.09□□□□□ -1.11
TRBV4-1-201ENST00000390357 PFN2P35080 140 aa8.08□□□□□ -1.12
TRBV4-1-201ENST00000390357 ERG28Q9UKR5 140 aa8.08□□□□□ -1.12
TRBV4-1-201ENST00000390357 APOC3P02656 99 aa8.07□□□□□ -1.12
TRBV4-1-201ENST00000390357 UBE2AP49459 152 aa8.07□□□□□ -1.12
TRBV4-1-201ENST00000390357 CTAG1AP78358 180 aa8.07□□□□□ -1.12
TRBV4-1-201ENST00000390357 GAGE10A6NGK3 116 aa8.06□□□□□ -1.12
TRBV4-1-201ENST00000390357 TMEM170BQ5T4T1 132 aa8.06□□□□□ -1.12
TRBV4-1-201ENST00000390357 TYMSOSQ8TAI1 123 aa8.06□□□□□ -1.12
TRBV4-1-201ENST00000390357 CHCHD1Q96BP2 118 aaKnown RBP8.06□□□□□ -1.12
TRBV4-1-201ENST00000390357 SND1-IT1Q9HBX3 110 aa8.06□□□□□ -1.12
TRBV4-1-201ENST00000390357 FAM229BQ4G0N7 80 aa8.05□□□□□ -1.12
TRBV4-1-201ENST00000390357 KRTAP13-1Q8IUC0 172 aa8.05□□□□□ -1.12
TRBV4-1-201ENST00000390357 TRAV12-1A0A0B4J245 112 aa8.04□□□□□ -1.12
TRBV4-1-201ENST00000390357 VPREB1P12018 145 aa8.04□□□□□ -1.12
TRBV4-1-201ENST00000390357 PRR4Q16378 134 aa8.04□□□□□ -1.12
TRBV4-1-201ENST00000390357 CHTOPQ9Y3Y2 248 aaKnown RBP8.04□□□□□ -1.12
TRBV4-1-201ENST00000390357 C11orf86A6NJI1 115 aa8.03□□□□□ -1.12
TRBV4-1-201ENST00000390357 LINC00587B1AMM8 73 aa8.03□□□□□ -1.12
TRBV4-1-201ENST00000390357 PMCHL1Q16048 86 aa8.03□□□□□ -1.12
TRBV4-1-201ENST00000390357 IGKV2-28A0A075B6P5 120 aa8.02□□□□□ -1.13
TRBV4-1-201ENST00000390357 A0A087X002 238 aa8.02□□□□□ -1.13
TRBV4-1-201ENST00000390357 IGKV2D-28P01615 120 aa8.02□□□□□ -1.13
TRBV4-1-201ENST00000390357 IFI27L1Q96BM0 104 aa8.02□□□□□ -1.13
TRBV4-1-201ENST00000390357 ZNF625Q96I27 306 aaPredicted RBP8.02□□□□□ -1.13
TRBV4-1-201ENST00000390357 LINC00158P58513 81 aa8.01□□□□□ -1.13
TRBV4-1-201ENST00000390357 TMEM126AQ9H061 195 aa8.01□□□□□ -1.13
TRBV4-1-201ENST00000390357 TMEM223A0PJW6 202 aa8□□□□□ -1.13
TRBV4-1-201ENST00000390357 ATP6V1G1O75348 118 aa8□□□□□ -1.13
TRBV4-1-201ENST00000390357 FAM19A1Q7Z5A9 133 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms