RNA–Protein interactions for RNA: ENST00000389138.7

ERCC4-202, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

TSL 2

Gene ERCC4, Length 2,106 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-202ENST00000389138 SIGLECL1Q8N7X8 197 aa3.81□□□□□ -1.8
ERCC4-202ENST00000389138 Q8N9W7 124 aa3.81□□□□□ -1.8
ERCC4-202ENST00000389138 RNF5Q99942 180 aa3.81□□□□□ -1.8
ERCC4-202ENST00000389138 LYSTQ99698 3801 aa3.81□□□□□ -1.8
ERCC4-202ENST00000389138 TMSB15BA0A087X1C1 80 aa3.8□□□□□ -1.8
ERCC4-202ENST00000389138 MUC21A0A140T8X8 626 aa3.8□□□□□ -1.8
ERCC4-202ENST00000389138 LECT2O14960 151 aa3.8□□□□□ -1.8
ERCC4-202ENST00000389138 C15orf32Q32M92 178 aa3.8□□□□□ -1.8
ERCC4-202ENST00000389138 Q86TA4 180 aa3.8□□□□□ -1.8
ERCC4-202ENST00000389138 FAM19A2Q8N3H0 131 aa3.8□□□□□ -1.8
ERCC4-202ENST00000389138 Q8N6K4 173 aa3.8□□□□□ -1.8
ERCC4-202ENST00000389138 RBAKDNA6NC62 111 aa3.8□□□□□ -1.8
ERCC4-202ENST00000389138 ZNF705FA8MVS1 300 aaPredicted RBP3.8□□□□□ -1.8
ERCC4-202ENST00000389138 H3BRN7 92 aa3.8□□□□□ -1.8
ERCC4-202ENST00000389138 ZNF705BP0CI00 300 aaPredicted RBP3.8□□□□□ -1.8
ERCC4-202ENST00000389138 SCGB3A1Q96QR1 104 aa3.8□□□□□ -1.8
ERCC4-202ENST00000389138 IGKV2-40A0A087WW87 121 aaPredicted RBP3.79□□□□□ -1.8
ERCC4-202ENST00000389138 K7ERS5 55 aa3.79□□□□□ -1.8
ERCC4-202ENST00000389138 IGKV2D-40P01614 121 aaPredicted RBP3.79□□□□□ -1.8
ERCC4-202ENST00000389138 IGLV2-11P01706 119 aa3.79□□□□□ -1.8
ERCC4-202ENST00000389138 CTSGP08311 255 aa3.79□□□□□ -1.8
ERCC4-202ENST00000389138 IGLC2P0DOY2 106 aa3.79□□□□□ -1.8
ERCC4-202ENST00000389138 KRTDAPP60985 99 aa3.79□□□□□ -1.8
ERCC4-202ENST00000389138 HIST1H4AP62805 103 aaKnown RBP3.79□□□□□ -1.8
ERCC4-202ENST00000389138 MINOS1Q5TGZ0 78 aa3.79□□□□□ -1.8
ERCC4-202ENST00000389138 Q8TAT8 98 aa3.79□□□□□ -1.8
ERCC4-202ENST00000389138 MINOS1-NBL1R4GNA1 71 aa3.79□□□□□ -1.8
ERCC4-202ENST00000389138 HERC2O95714 4834 aa3.79□□□□□ -1.8
ERCC4-202ENST00000389138 RYR1P21817 5038 aa3.79□□□□□ -1.8
ERCC4-202ENST00000389138 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.79□□□□□ -1.8
ERCC4-202ENST00000389138 HLA-DQA1P01909 254 aa3.79□□□□□ -1.8
ERCC4-202ENST00000389138 FUSP35637 526 aaKnown RBP eCLIP3.79□□□□□ -1.8
ERCC4-202ENST00000389138 PMCHL1Q16048 86 aa3.79□□□□□ -1.8
ERCC4-202ENST00000389138 TSKUQ8WUA8 353 aa3.79□□□□□ -1.8
ERCC4-202ENST00000389138 CLEC2BQ92478 149 aa3.79□□□□□ -1.8
ERCC4-202ENST00000389138 XAGE1AQ9HD64 81 aa3.79□□□□□ -1.8
ERCC4-202ENST00000389138 TMEM14CQ9P0S9 112 aa3.79□□□□□ -1.8
ERCC4-202ENST00000389138 TIMM8BQ9Y5J9 83 aaPredicted RBP3.79□□□□□ -1.8
ERCC4-202ENST00000389138 U3KQK5 164 aa3.79□□□□□ -1.8
ERCC4-202ENST00000389138 A6NN06 94 aa3.78□□□□□ -1.8
ERCC4-202ENST00000389138 H3BMM0 161 aa3.78□□□□□ -1.8
ERCC4-202ENST00000389138 SLC25A20O43772 301 aa3.78□□□□□ -1.8
ERCC4-202ENST00000389138 BLCAPP62952 87 aa3.78□□□□□ -1.8
ERCC4-202ENST00000389138 FAM229BQ4G0N7 80 aa3.78□□□□□ -1.8
ERCC4-202ENST00000389138 UBE2WQ96B02 151 aa3.78□□□□□ -1.8
ERCC4-202ENST00000389138 TMEM223A0PJW6 202 aa3.77□□□□□ -1.81
ERCC4-202ENST00000389138 A6NDX4 124 aa3.77□□□□□ -1.81
ERCC4-202ENST00000389138 H3BUX3 64 aa3.77□□□□□ -1.81
ERCC4-202ENST00000389138 K7EP34 96 aa3.77□□□□□ -1.81
ERCC4-202ENST00000389138 TCL1BO95988 128 aa3.77□□□□□ -1.81
ERCC4-202ENST00000389138 IGHV1-69P01742 117 aa3.77□□□□□ -1.81
ERCC4-202ENST00000389138 C5orf56Q8N8D9 126 aa3.77□□□□□ -1.81
ERCC4-202ENST00000389138 C18orf32Q8TCD1 76 aa3.77□□□□□ -1.81
ERCC4-202ENST00000389138 C16orf74Q96GX8 76 aa3.77□□□□□ -1.81
ERCC4-202ENST00000389138 RABAC1Q9UI14 185 aa3.77□□□□□ -1.81
ERCC4-202ENST00000389138 SMAD5-AS1Q9Y6J3 95 aa3.77□□□□□ -1.81
ERCC4-202ENST00000389138 ARMS2P0C7Q2 107 aa3.77□□□□□ -1.81
ERCC4-202ENST00000389138 CRIP1P50238 77 aa3.77□□□□□ -1.81
ERCC4-202ENST00000389138 DNAH7Q8WXX0 4024 aa3.76□□□□□ -1.81
ERCC4-202ENST00000389138 IGKV3-7A0A075B6H7 116 aa3.76□□□□□ -1.81
ERCC4-202ENST00000389138 SH2D1AO60880 128 aa3.76□□□□□ -1.81
ERCC4-202ENST00000389138 FXYD7P58549 80 aa3.76□□□□□ -1.81
ERCC4-202ENST00000389138 NPC2P61916 151 aa3.76□□□□□ -1.81
ERCC4-202ENST00000389138 CIRBPQ14011 172 aaKnown RBP3.76□□□□□ -1.81
ERCC4-202ENST00000389138 C9orf129Q5T035 196 aaKnown RBP3.76□□□□□ -1.81
ERCC4-202ENST00000389138 C14orf178Q8N769 122 aaPredicted RBP3.76□□□□□ -1.81
ERCC4-202ENST00000389138 SMCR5Q8TEV8 140 aa3.76□□□□□ -1.81
ERCC4-202ENST00000389138 COPS9Q8WXC6 57 aa3.76□□□□□ -1.81
ERCC4-202ENST00000389138 CSMD3Q7Z407 3707 aa3.76□□□□□ -1.81
ERCC4-202ENST00000389138 CLPSL1A2RUU4 121 aa3.76□□□□□ -1.81
ERCC4-202ENST00000389138 A8MUU9 505 aa3.76□□□□□ -1.81
ERCC4-202ENST00000389138 B4DSR2 109 aa3.76□□□□□ -1.81
ERCC4-202ENST00000389138 RPL28P46779 137 aaKnown RBP3.76□□□□□ -1.81
ERCC4-202ENST00000389138 DEFB1P60022 68 aa3.76□□□□□ -1.81
ERCC4-202ENST00000389138 Q1RN00 199 aa3.76□□□□□ -1.81
ERCC4-202ENST00000389138 RAB37Q96AX2 223 aa3.76□□□□□ -1.81
ERCC4-202ENST00000389138 DPH3P1Q9H4G8 78 aa3.76□□□□□ -1.81
ERCC4-202ENST00000389138 MSMBP08118 114 aa3.75□□□□□ -1.81
ERCC4-202ENST00000389138 C3orf79P0CE67 100 aa3.75□□□□□ -1.81
ERCC4-202ENST00000389138 KPRPQ5T749 579 aaPredicted RBP3.75□□□□□ -1.81
ERCC4-202ENST00000389138 SDIM1Q6ZPB5 146 aa3.75□□□□□ -1.81
ERCC4-202ENST00000389138 Q6ZQT7 251 aa3.75□□□□□ -1.81
ERCC4-202ENST00000389138 C2orf91Q6ZV80 131 aa3.75□□□□□ -1.81
ERCC4-202ENST00000389138 Q8NDZ9 215 aa3.75□□□□□ -1.81
ERCC4-202ENST00000389138 C1orf64Q8NEQ6 169 aa3.75□□□□□ -1.81
ERCC4-202ENST00000389138 SORL1Q92673 2214 aa3.74□□□□□ -1.81
ERCC4-202ENST00000389138 PRB2P02812 416 aaPredicted RBP3.74□□□□□ -1.81
ERCC4-202ENST00000389138 PDE6HQ13956 83 aa3.74□□□□□ -1.81
ERCC4-202ENST00000389138 C10orf99Q6UWK7 81 aa3.74□□□□□ -1.81
ERCC4-202ENST00000389138 LYZL1Q6UWQ5 148 aa3.74□□□□□ -1.81
ERCC4-202ENST00000389138 LYPD1Q8N2G4 141 aa3.74□□□□□ -1.81
ERCC4-202ENST00000389138 RETNLBQ9BQ08 111 aa3.74□□□□□ -1.81
ERCC4-202ENST00000389138 A0A1B0GUT8 65 aa3.74□□□□□ -1.81
ERCC4-202ENST00000389138 TIMM17BO60830 172 aa3.74□□□□□ -1.81
ERCC4-202ENST00000389138 COX7CP15954 63 aa3.74□□□□□ -1.81
ERCC4-202ENST00000389138 MIAQ16674 131 aa3.74□□□□□ -1.81
ERCC4-202ENST00000389138 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.74□□□□□ -1.81
ERCC4-202ENST00000389138 MIR7-3HGQ8N6C7 128 aa3.74□□□□□ -1.81
ERCC4-202ENST00000389138 CHCHD1Q96BP2 118 aaKnown RBP3.74□□□□□ -1.81
ERCC4-202ENST00000389138 C20orf78Q9BR46 151 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms