RNA–Protein interactions for RNA: ENST00000381575.6

SHOX-202, Transcript of short stature homeobox, humanhuman

TSL 1 (best) BASIC

Gene SHOX, Length 1,351 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-202ENST00000381575 C22orf24Q9Y442 160 aa8.49□□□□□ -1.05
SHOX-202ENST00000381575 K7EMI3 77 aa8.48□□□□□ -1.05
SHOX-202ENST00000381575 TIMM17AQ99595 171 aa8.48□□□□□ -1.05
SHOX-202ENST00000381575 IGLV1-50A0A075B6I6 118 aa8.48□□□□□ -1.05
SHOX-202ENST00000381575 NPSP0C0P6 89 aa8.48□□□□□ -1.05
SHOX-202ENST00000381575 SCGB3A1Q96QR1 104 aa8.48□□□□□ -1.05
SHOX-202ENST00000381575 F8VRH5 84 aa8.47□□□□□ -1.05
SHOX-202ENST00000381575 CLLU1Q5K131 121 aa8.47□□□□□ -1.05
SHOX-202ENST00000381575 PAPPA-AS1Q5QFB9 102 aa8.47□□□□□ -1.05
SHOX-202ENST00000381575 SMIM1B2RUZ4 78 aa8.46□□□□□ -1.06
SHOX-202ENST00000381575 SEC11AP67812 179 aa8.46□□□□□ -1.06
SHOX-202ENST00000381575 ZNF861PO60384 105 aa8.45□□□□□ -1.06
SHOX-202ENST00000381575 SPINK8P0C7L1 97 aa8.45□□□□□ -1.06
SHOX-202ENST00000381575 ERASQ7Z444 233 aa8.45□□□□□ -1.06
SHOX-202ENST00000381575 COX7B2Q8TF08 81 aa8.44□□□□□ -1.06
SHOX-202ENST00000381575 TINCRA0A1B0GVN0 87 aa8.43□□□□□ -1.06
SHOX-202ENST00000381575 TMEM218A2RU14 115 aa8.43□□□□□ -1.06
SHOX-202ENST00000381575 GAGE10A6NGK3 116 aa8.43□□□□□ -1.06
SHOX-202ENST00000381575 RPL37AP8A6NKH3 93 aa8.43□□□□□ -1.06
SHOX-202ENST00000381575 G0S2P27469 103 aa8.43□□□□□ -1.06
SHOX-202ENST00000381575 RAB5BP61020 215 aa8.43□□□□□ -1.06
SHOX-202ENST00000381575 LBHQ53QV2 105 aaPredicted RBP8.43□□□□□ -1.06
SHOX-202ENST00000381575 MRPL55Q7Z7F7 128 aaKnown RBP8.43□□□□□ -1.06
SHOX-202ENST00000381575 NUPR1O60356 82 aa8.42□□□□□ -1.06
SHOX-202ENST00000381575 PRR4Q16378 134 aa8.42□□□□□ -1.06
SHOX-202ENST00000381575 CST9LQ9H4G1 147 aa8.42□□□□□ -1.06
SHOX-202ENST00000381575 TRAV9-1A0A075B6T8 112 aa8.41□□□□□ -1.06
SHOX-202ENST00000381575 RPL13AP40429 203 aaKnown RBP8.41□□□□□ -1.06
SHOX-202ENST00000381575 CXCL5P42830 114 aa8.41□□□□□ -1.06
SHOX-202ENST00000381575 IFITM2Q01629 132 aa8.41□□□□□ -1.06
SHOX-202ENST00000381575 PDZD11Q5EBL8 140 aa8.41□□□□□ -1.06
SHOX-202ENST00000381575 IGLV5-45A0A087WSX0 123 aa8.4□□□□□ -1.06
SHOX-202ENST00000381575 SCO1O75880 301 aa8.4□□□□□ -1.06
SHOX-202ENST00000381575 LINC00167Q96N53 147 aa8.4□□□□□ -1.06
SHOX-202ENST00000381575 GNB1LQ9BYB4 327 aa8.4□□□□□ -1.06
SHOX-202ENST00000381575 TP73-AS1Q9UF72 201 aa8.4□□□□□ -1.06
SHOX-202ENST00000381575 A0A087X002 238 aa8.39□□□□□ -1.07
SHOX-202ENST00000381575 LINC01546A6NGU7 62 aa8.39□□□□□ -1.07
SHOX-202ENST00000381575 BCE1O60756 84 aa8.39□□□□□ -1.07
SHOX-202ENST00000381575 TSPAN13O95857 204 aa8.39□□□□□ -1.07
SHOX-202ENST00000381575 S100PP25815 95 aa8.39□□□□□ -1.07
SHOX-202ENST00000381575 UQCC3Q6UW78 93 aa8.39□□□□□ -1.07
SHOX-202ENST00000381575 FA2HQ7L5A8 372 aa8.39□□□□□ -1.07
SHOX-202ENST00000381575 MRPL18Q9H0U6 180 aaKnown RBP8.39□□□□□ -1.07
SHOX-202ENST00000381575 FABP9Q0Z7S8 132 aa8.38□□□□□ -1.07
SHOX-202ENST00000381575 PMVKQ15126 192 aa8.38□□□□□ -1.07
SHOX-202ENST00000381575 SMCO4Q9NRQ5 59 aa8.38□□□□□ -1.07
SHOX-202ENST00000381575 ANAPC11Q9NYG5 84 aa8.38□□□□□ -1.07
SHOX-202ENST00000381575 RPL28P46779 137 aaKnown RBP8.37□□□□□ -1.07
SHOX-202ENST00000381575 NDUFA5Q16718 116 aa8.37□□□□□ -1.07
SHOX-202ENST00000381575 SEC11CQ9BY50 192 aa8.37□□□□□ -1.07
SHOX-202ENST00000381575 CARHSP1Q9Y2V2 147 aaKnown RBP8.37□□□□□ -1.07
SHOX-202ENST00000381575 NDUFA6P56556 154 aa8.36□□□□□ -1.07
SHOX-202ENST00000381575 COMMD7Q86VX2 200 aa8.36□□□□□ -1.07
SHOX-202ENST00000381575 PFN2P35080 140 aa8.35□□□□□ -1.07
SHOX-202ENST00000381575 NKAPP1Q8N9T2 125 aa8.35□□□□□ -1.07
SHOX-202ENST00000381575 MUC2Q02817 5179 aa8.35□□□□□ -1.07
SHOX-202ENST00000381575 IGKV2-28A0A075B6P5 120 aa8.35□□□□□ -1.07
SHOX-202ENST00000381575 A0A096LNJ9 63 aa8.35□□□□□ -1.07
SHOX-202ENST00000381575 IGKV2D-28P01615 120 aa8.35□□□□□ -1.07
SHOX-202ENST00000381575 PMCHL1Q16048 86 aa8.35□□□□□ -1.07
SHOX-202ENST00000381575 RPS10P5Q9NQ39 176 aa8.35□□□□□ -1.07
SHOX-202ENST00000381575 IGLV5-37A0A075B6J1 123 aa8.34□□□□□ -1.07
SHOX-202ENST00000381575 LINC01549A6NIU2 74 aa8.34□□□□□ -1.07
SHOX-202ENST00000381575 H3BRM9 83 aa8.34□□□□□ -1.07
SHOX-202ENST00000381575 ATP5LO75964 103 aa8.34□□□□□ -1.07
SHOX-202ENST00000381575 IGLC3P0DOY3 106 aa8.34□□□□□ -1.07
SHOX-202ENST00000381575 URB1-AS1Q96HZ7 61 aa8.34□□□□□ -1.07
SHOX-202ENST00000381575 ZNF22P17026 224 aaPredicted RBP8.33□□□□□ -1.08
SHOX-202ENST00000381575 UBE2AP49459 152 aa8.33□□□□□ -1.08
SHOX-202ENST00000381575 TYMSOSQ8TAI1 123 aa8.33□□□□□ -1.08
SHOX-202ENST00000381575 IGLV5-39A0A0G2JS06 123 aa8.32□□□□□ -1.08
SHOX-202ENST00000381575 CRYGAP11844 174 aa8.32□□□□□ -1.08
SHOX-202ENST00000381575 COX19Q49B96 90 aa8.32□□□□□ -1.08
SHOX-202ENST00000381575 KRTAP13-1Q8IUC0 172 aa8.32□□□□□ -1.08
SHOX-202ENST00000381575 ZNF625Q96I27 306 aaPredicted RBP8.32□□□□□ -1.08
SHOX-202ENST00000381575 KRTAP13-2Q52LG2 175 aa8.31□□□□□ -1.08
SHOX-202ENST00000381575 C18orf32Q8TCD1 76 aa8.31□□□□□ -1.08
SHOX-202ENST00000381575 TMEM238C9JI98 176 aa8.3□□□□□ -1.08
SHOX-202ENST00000381575 ATP6V1G1O75348 118 aa8.3□□□□□ -1.08
SHOX-202ENST00000381575 PRLHP81277 87 aa8.3□□□□□ -1.08
SHOX-202ENST00000381575 RHEBQ15382 184 aa8.3□□□□□ -1.08
SHOX-202ENST00000381575 C10orf91Q5T1B1 145 aa8.3□□□□□ -1.08
SHOX-202ENST00000381575 Q8NDZ9 215 aa8.3□□□□□ -1.08
SHOX-202ENST00000381575 SND1-IT1Q9HBX3 110 aa8.3□□□□□ -1.08
SHOX-202ENST00000381575 ERG28Q9UKR5 140 aa8.3□□□□□ -1.08
SHOX-202ENST00000381575 C11orf86A6NJI1 115 aa8.29□□□□□ -1.08
SHOX-202ENST00000381575 VPREB1P12018 145 aa8.29□□□□□ -1.08
SHOX-202ENST00000381575 TRAPPC1Q9Y5R8 145 aa8.29□□□□□ -1.08
SHOX-202ENST00000381575 HBDP02042 147 aa8.28□□□□□ -1.08
SHOX-202ENST00000381575 LINC00614P0C842 121 aa8.28□□□□□ -1.08
SHOX-202ENST00000381575 RETNLBQ9BQ08 111 aa8.28□□□□□ -1.08
SHOX-202ENST00000381575 TMEM170BQ5T4T1 132 aa8.27□□□□□ -1.09
SHOX-202ENST00000381575 FAM19A1Q7Z5A9 133 aa8.27□□□□□ -1.09
SHOX-202ENST00000381575 BAGE3Q86Y29 109 aa8.27□□□□□ -1.09
SHOX-202ENST00000381575 S100A1P23297 94 aa8.26□□□□□ -1.09
SHOX-202ENST00000381575 TMEM126AQ9H061 195 aa8.26□□□□□ -1.09
SHOX-202ENST00000381575 A0A0U1RRA0 63 aa8.24□□□□□ -1.09
SHOX-202ENST00000381575 M0R378 163 aa8.24□□□□□ -1.09
SHOX-202ENST00000381575 SLC7A5P1Q8MH63 180 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms