RNA–Protein interactions for RNA: ENST00000381513.8

SMARCD1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCD1, Length 3,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-201ENST00000381513 LOC100131303A0A0U1RQF7 123 aa13.24□□□□□ -0.29
SMARCD1-201ENST00000381513 IL17DQ8TAD2 202 aa13.24□□□□□ -0.29
SMARCD1-201ENST00000381513 CEP295Q9C0D2 2601 aa13.24□□□□□ -0.29
SMARCD1-201ENST00000381513 DEFB136Q30KP8 78 aa13.24□□□□□ -0.29
SMARCD1-201ENST00000381513 NANOS2P60321 138 aaKnown RBP13.23□□□□□ -0.29
SMARCD1-201ENST00000381513 FBXL19-AS1Q494R0 122 aa13.23□□□□□ -0.29
SMARCD1-201ENST00000381513 A0A087WZ39 114 aa13.22□□□□□ -0.29
SMARCD1-201ENST00000381513 DAD1P61803 113 aa13.22□□□□□ -0.29
SMARCD1-201ENST00000381513 TRBV7-4A0A0J9YYF1 115 aa13.21□□□□□ -0.29
SMARCD1-201ENST00000381513 SLURP1P55000 103 aa13.2□□□□□ -0.3
SMARCD1-201ENST00000381513 TRGV2A0A075B6R0 118 aa13.2□□□□□ -0.3
SMARCD1-201ENST00000381513 LRCOL1A6NCL2 159 aa13.2□□□□□ -0.3
SMARCD1-201ENST00000381513 ZNF561-AS1K7EIQ3 104 aa13.2□□□□□ -0.3
SMARCD1-201ENST00000381513 ABCA2Q9BZC7 2435 aa13.19□□□□□ -0.3
SMARCD1-201ENST00000381513 CLPSL2Q6UWE3 100 aa13.19□□□□□ -0.3
SMARCD1-201ENST00000381513 BPY2O14599 106 aa13.19□□□□□ -0.3
SMARCD1-201ENST00000381513 GNLYP22749 145 aa13.19□□□□□ -0.3
SMARCD1-201ENST00000381513 ESRGQ1W209 222 aa13.19□□□□□ -0.3
SMARCD1-201ENST00000381513 FUSP35637 526 aaKnown RBP eCLIP13.18□□□□□ -0.3
SMARCD1-201ENST00000381513 NOP10Q9NPE3 64 aaKnown RBP13.18□□□□□ -0.3
SMARCD1-201ENST00000381513 DYNLRB2Q8TF09 96 aa13.18□□□□□ -0.3
SMARCD1-201ENST00000381513 ZNF292O60281 2723 aa13.17□□□□□ -0.3
SMARCD1-201ENST00000381513 CXCL6P80162 114 aa13.17□□□□□ -0.3
SMARCD1-201ENST00000381513 ADORA2A-AS1P86434 159 aa13.17□□□□□ -0.3
SMARCD1-201ENST00000381513 MAP6D1Q9H9H5 199 aa13.17□□□□□ -0.3
SMARCD1-201ENST00000381513 Q8N9L7 120 aa13.16□□□□□ -0.3
SMARCD1-201ENST00000381513 IGHV4-61A0A0C4DH41 118 aa13.16□□□□□ -0.3
SMARCD1-201ENST00000381513 IGHV4-59P01825 116 aa13.16□□□□□ -0.3
SMARCD1-201ENST00000381513 Q6ZQY7 126 aa13.16□□□□□ -0.3
SMARCD1-201ENST00000381513 PMAIP1Q13794 54 aa13.15□□□□□ -0.3
SMARCD1-201ENST00000381513 LINC00575Q6W349 94 aa13.15□□□□□ -0.3
SMARCD1-201ENST00000381513 CRYBG3Q68DQ2 2970 aa13.15□□□□□ -0.3
SMARCD1-201ENST00000381513 LOC110117498A0A087WWA1 95 aa13.15□□□□□ -0.31
SMARCD1-201ENST00000381513 TRGV4A0A0C4DH28 118 aa13.14□□□□□ -0.31
SMARCD1-201ENST00000381513 PRYO14603 147 aa13.13□□□□□ -0.31
SMARCD1-201ENST00000381513 MYO9AB2RTY4 2548 aa13.13□□□□□ -0.31
SMARCD1-201ENST00000381513 C9orf116Q5BN46 136 aaPredicted RBP13.13□□□□□ -0.31
SMARCD1-201ENST00000381513 STHQ8IWL8 128 aa13.13□□□□□ -0.31
SMARCD1-201ENST00000381513 JMJD1CQ15652 2540 aa13.12□□□□□ -0.31
SMARCD1-201ENST00000381513 C6orf223Q8N319 242 aa13.12□□□□□ -0.31
SMARCD1-201ENST00000381513 SPATA3Q8NHX4 192 aa13.12□□□□□ -0.31
SMARCD1-201ENST00000381513 LINC00959A0A1B0GUT2 108 aa13.11□□□□□ -0.31
SMARCD1-201ENST00000381513 C18orf65Q6ZTR6 163 aa13.11□□□□□ -0.31
SMARCD1-201ENST00000381513 C1orf158Q8N1D5 194 aa13.11□□□□□ -0.31
SMARCD1-201ENST00000381513 BBC3Q96PG8 261 aaPredicted RBP13.11□□□□□ -0.31
SMARCD1-201ENST00000381513 C11orf44Q8N8P7 122 aa13.11□□□□□ -0.31
SMARCD1-201ENST00000381513 MUC7Q8TAX7 377 aa13.11□□□□□ -0.31
SMARCD1-201ENST00000381513 CSMD2Q7Z408 3487 aa13.09□□□□□ -0.31
SMARCD1-201ENST00000381513 TLN2Q9Y4G6 2542 aa13.09□□□□□ -0.31
SMARCD1-201ENST00000381513 TRBV6-8A0A0A6YYG3 113 aa13.09□□□□□ -0.31
SMARCD1-201ENST00000381513 PDE6GP18545 87 aa13.08□□□□□ -0.32
SMARCD1-201ENST00000381513 HIGD2AQ9BW72 106 aa13.08□□□□□ -0.32
SMARCD1-201ENST00000381513 HIVEP3Q5T1R4 2406 aa13.07□□□□□ -0.32
SMARCD1-201ENST00000381513 PLAC8L1A1L4L8 177 aa13.07□□□□□ -0.32
SMARCD1-201ENST00000381513 Q8IZM0 81 aa13.05□□□□□ -0.32
SMARCD1-201ENST00000381513 LINC00269Q8N2A0 174 aa13.05□□□□□ -0.32
SMARCD1-201ENST00000381513 DEFB112Q30KQ8 113 aa13.05□□□□□ -0.32
SMARCD1-201ENST00000381513 FN1P02751 2386 aaKnown RBP13.05□□□□□ -0.32
SMARCD1-201ENST00000381513 PSPHP1O15172 72 aa13.04□□□□□ -0.32
SMARCD1-201ENST00000381513 USP9YO00507 2555 aaPredicted RBP13.03□□□□□ -0.32
SMARCD1-201ENST00000381513 IGLV10-54A0A075B6I4 117 aa13.02□□□□□ -0.32
SMARCD1-201ENST00000381513 Q8NDZ9 215 aa13.02□□□□□ -0.32
SMARCD1-201ENST00000381513 PRB2P02812 416 aaPredicted RBP13.01□□□□□ -0.33
SMARCD1-201ENST00000381513 LINC01006Q8NI28 216 aa13.01□□□□□ -0.33
SMARCD1-201ENST00000381513 SPTBN4Q9H254 2564 aa13.01□□□□□ -0.33
SMARCD1-201ENST00000381513 PLA2G2AP14555 144 aa13.01□□□□□ -0.33
SMARCD1-201ENST00000381513 MSMBP08118 114 aa13□□□□□ -0.33
SMARCD1-201ENST00000381513 CD164L2Q6UWJ8 174 aa13□□□□□ -0.33
SMARCD1-201ENST00000381513 Q6ZTC4 211 aa13□□□□□ -0.33
SMARCD1-201ENST00000381513 RETNQ9HD89 108 aa13□□□□□ -0.33
SMARCD1-201ENST00000381513 VPS13CQ709C8 3753 aa13□□□□□ -0.33
SMARCD1-201ENST00000381513 C9orf66Q5T8R8 295 aa12.99□□□□□ -0.33
SMARCD1-201ENST00000381513 PRR15Q8IV56 129 aa12.99□□□□□ -0.33
SMARCD1-201ENST00000381513 CELA1Q9UNI1 258 aa12.99□□□□□ -0.33
SMARCD1-201ENST00000381513 SONP18583 2426 aaKnown RBP12.99□□□□□ -0.33
SMARCD1-201ENST00000381513 IGF2RP11717 2491 aa12.99□□□□□ -0.33
SMARCD1-201ENST00000381513 A0A096LPF7 62 aa12.99□□□□□ -0.33
SMARCD1-201ENST00000381513 ERC2-IT1O76042 136 aa12.98□□□□□ -0.33
SMARCD1-201ENST00000381513 ODF3L2Q3SX64 289 aa12.98□□□□□ -0.33
SMARCD1-201ENST00000381513 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.98□□□□□ -0.33
SMARCD1-201ENST00000381513 ITPR1Q14643 2758 aa12.98□□□□□ -0.33
SMARCD1-201ENST00000381513 A0A1W2PRX2 142 aa12.98□□□□□ -0.33
SMARCD1-201ENST00000381513 DEFB114Q30KQ6 69 aa12.97□□□□□ -0.33
SMARCD1-201ENST00000381513 SETD2Q9BYW2 2564 aaPredicted RBP12.97□□□□□ -0.33
SMARCD1-201ENST00000381513 CR1P17927 2039 aa12.97□□□□□ -0.33
SMARCD1-201ENST00000381513 FAM30AQ9NZY2 134 aa12.96□□□□□ -0.34
SMARCD1-201ENST00000381513 IGHV4-30-2A0A087WSY4 118 aa12.95□□□□□ -0.34
SMARCD1-201ENST00000381513 USP9XQ93008 2570 aaPredicted RBP12.95□□□□□ -0.34
SMARCD1-201ENST00000381513 PRR4Q16378 134 aa12.95□□□□□ -0.34
SMARCD1-201ENST00000381513 OCR1Q9BZK8 76 aa12.95□□□□□ -0.34
SMARCD1-201ENST00000381513 PTPN13Q12923 2485 aa12.94□□□□□ -0.34
SMARCD1-201ENST00000381513 DEFB130BP0DP73 79 aa12.94□□□□□ -0.34
SMARCD1-201ENST00000381513 DEFB130AP0DP74 79 aa12.94□□□□□ -0.34
SMARCD1-201ENST00000381513 COX17Q14061 63 aa12.93□□□□□ -0.34
SMARCD1-201ENST00000381513 C3orf84H3BNL1 204 aa12.93□□□□□ -0.34
SMARCD1-201ENST00000381513 IGKV4-1P06312 121 aa12.92□□□□□ -0.34
SMARCD1-201ENST00000381513 CHD8Q9HCK8 2581 aa12.92□□□□□ -0.34
SMARCD1-201ENST00000381513 Q6ZRP5 223 aa12.92□□□□□ -0.34
SMARCD1-201ENST00000381513 DIRC1Q969H9 104 aa12.91□□□□□ -0.34
SMARCD1-201ENST00000381513 hDV103S1A0JD37 113 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 1358.6 ms