RNA–Protein interactions for RNA: ENST00000381118.7

ERCC8-202, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 2

Gene ERCC8, Length 2,236 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-202ENST00000381118 ADAMTSL4-AS1Q5T5F5 129 aa5.35□□□□□ -1.55
ERCC8-202ENST00000381118 MUC7Q8TAX7 377 aa5.35□□□□□ -1.55
ERCC8-202ENST00000381118 KRTAP1-5Q9BYS1 174 aa5.35□□□□□ -1.55
ERCC8-202ENST00000381118 TMEM238C9JI98 176 aa5.34□□□□□ -1.55
ERCC8-202ENST00000381118 APOMO95445 188 aa5.34□□□□□ -1.55
ERCC8-202ENST00000381118 CKS1BP61024 79 aa5.34□□□□□ -1.55
ERCC8-202ENST00000381118 CFAP161Q6P656 301 aa5.34□□□□□ -1.55
ERCC8-202ENST00000381118 KRTAP26-1Q6PEX3 210 aa5.34□□□□□ -1.55
ERCC8-202ENST00000381118 Q8IZM0 81 aa5.34□□□□□ -1.55
ERCC8-202ENST00000381118 C6orf223Q8N319 242 aa5.34□□□□□ -1.55
ERCC8-202ENST00000381118 VPS13DQ5THJ4 4388 aa5.34□□□□□ -1.56
ERCC8-202ENST00000381118 SPAG11BQ08648 103 aa5.33□□□□□ -1.56
ERCC8-202ENST00000381118 HIGD2BQ4VC39 106 aa5.33□□□□□ -1.56
ERCC8-202ENST00000381118 LINC01561Q8N1V8 128 aa5.33□□□□□ -1.56
ERCC8-202ENST00000381118 LITAFQ99732 161 aa5.33□□□□□ -1.56
ERCC8-202ENST00000381118 SMIM13P0DJ93 91 aa5.33□□□□□ -1.56
ERCC8-202ENST00000381118 PFN2P35080 140 aa5.33□□□□□ -1.56
ERCC8-202ENST00000381118 KIAA0087Q14695 138 aa5.33□□□□□ -1.56
ERCC8-202ENST00000381118 TAL2Q16559 108 aa5.33□□□□□ -1.56
ERCC8-202ENST00000381118 SPANXB1Q9NS25 103 aaPredicted RBP5.33□□□□□ -1.56
ERCC8-202ENST00000381118 HERV-K104P63124 156 aa5.32□□□□□ -1.56
ERCC8-202ENST00000381118 CIRBPQ14011 172 aaKnown RBP5.32□□□□□ -1.56
ERCC8-202ENST00000381118 MUSTN1Q8IVN3 82 aa5.32□□□□□ -1.56
ERCC8-202ENST00000381118 WWC2-AS2Q96NR7 200 aa5.32□□□□□ -1.56
ERCC8-202ENST00000381118 NHP2Q9NX24 153 aaKnown RBP5.32□□□□□ -1.56
ERCC8-202ENST00000381118 COL5A1-AS1Q5SY13 56 aa5.32□□□□□ -1.56
ERCC8-202ENST00000381118 CASC10Q5T4H9 136 aa5.32□□□□□ -1.56
ERCC8-202ENST00000381118 Q6ZVH6 145 aa5.32□□□□□ -1.56
ERCC8-202ENST00000381118 TM2D2Q9BX73 214 aa5.32□□□□□ -1.56
ERCC8-202ENST00000381118 ZNF561-AS1K7EIQ3 104 aa5.31□□□□□ -1.56
ERCC8-202ENST00000381118 K7ERJ3 54 aa5.31□□□□□ -1.56
ERCC8-202ENST00000381118 M0R2N4 97 aa5.31□□□□□ -1.56
ERCC8-202ENST00000381118 LECT2O14960 151 aa5.31□□□□□ -1.56
ERCC8-202ENST00000381118 LINC00158P58513 81 aa5.31□□□□□ -1.56
ERCC8-202ENST00000381118 C9orf116Q5BN46 136 aaPredicted RBP5.31□□□□□ -1.56
ERCC8-202ENST00000381118 C10orf25Q5T742 122 aa5.31□□□□□ -1.56
ERCC8-202ENST00000381118 C15orf56Q8N910 161 aa5.31□□□□□ -1.56
ERCC8-202ENST00000381118 RAB37Q96AX2 223 aa5.31□□□□□ -1.56
ERCC8-202ENST00000381118 A6NDN8 102 aa5.31□□□□□ -1.56
ERCC8-202ENST00000381118 EIF4EBP3O60516 100 aaPredicted RBP5.31□□□□□ -1.56
ERCC8-202ENST00000381118 UNQ6190/PRO20217Q6UXQ8 127 aa5.31□□□□□ -1.56
ERCC8-202ENST00000381118 SPANXDQ9BXN6 97 aa5.31□□□□□ -1.56
ERCC8-202ENST00000381118 SPANXCQ9NY87 97 aa5.31□□□□□ -1.56
ERCC8-202ENST00000381118 CXCL5P42830 114 aa5.3□□□□□ -1.56
ERCC8-202ENST00000381118 LBHQ53QV2 105 aaPredicted RBP5.3□□□□□ -1.56
ERCC8-202ENST00000381118 MIR7-3HGQ8N6C7 128 aa5.3□□□□□ -1.56
ERCC8-202ENST00000381118 RMI2Q96E14 147 aa5.3□□□□□ -1.56
ERCC8-202ENST00000381118 ERG28Q9UKR5 140 aa5.3□□□□□ -1.56
ERCC8-202ENST00000381118 NBDYA0A0U1RRE5 68 aa5.29□□□□□ -1.56
ERCC8-202ENST00000381118 A4D1N5 150 aa5.29□□□□□ -1.56
ERCC8-202ENST00000381118 PSCAO43653 123 aa5.29□□□□□ -1.56
ERCC8-202ENST00000381118 TIMM17BO60830 172 aa5.29□□□□□ -1.56
ERCC8-202ENST00000381118 SFTA2Q6UW10 78 aa5.29□□□□□ -1.56
ERCC8-202ENST00000381118 A0A1B0GV90 55 aa5.29□□□□□ -1.56
ERCC8-202ENST00000381118 TMEM238LA0A1B0GVL6 79 aa5.29□□□□□ -1.56
ERCC8-202ENST00000381118 RPL24P83731 157 aaKnown RBP5.29□□□□□ -1.56
ERCC8-202ENST00000381118 NTN5Q8WTR8 489 aaPredicted RBP5.29□□□□□ -1.56
ERCC8-202ENST00000381118 CAMK2N2Q96S95 79 aa5.29□□□□□ -1.56
ERCC8-202ENST00000381118 USP17L23D6RBM5 183 aa5.28□□□□□ -1.56
ERCC8-202ENST00000381118 LY6G6CO95867 125 aa5.28□□□□□ -1.56
ERCC8-202ENST00000381118 SOSTDC1Q6X4U4 206 aa5.28□□□□□ -1.56
ERCC8-202ENST00000381118 LINC00308Q8TCZ7 52 aa5.28□□□□□ -1.56
ERCC8-202ENST00000381118 NAA38Q9BRA0 125 aaKnown RBP5.28□□□□□ -1.56
ERCC8-202ENST00000381118 DNAH2Q9P225 4427 aa5.28□□□□□ -1.56
ERCC8-202ENST00000381118 TAX1BP3O14907 124 aa5.28□□□□□ -1.56
ERCC8-202ENST00000381118 TTC32Q5I0X7 151 aa5.28□□□□□ -1.56
ERCC8-202ENST00000381118 Q6ZRU5 148 aa5.28□□□□□ -1.56
ERCC8-202ENST00000381118 HYDINQ4G0P3 5121 aa5.28□□□□□ -1.56
ERCC8-202ENST00000381118 CFC1BP0CG36 223 aa5.27□□□□□ -1.57
ERCC8-202ENST00000381118 CFC1P0CG37 223 aa5.27□□□□□ -1.57
ERCC8-202ENST00000381118 C6orf48Q9UBA6 75 aa5.27□□□□□ -1.57
ERCC8-202ENST00000381118 COX11Q9Y6N1 276 aa5.27□□□□□ -1.57
ERCC8-202ENST00000381118 GVQW2A0A096LPI5 108 aaPredicted RBP5.27□□□□□ -1.57
ERCC8-202ENST00000381118 WFDC2Q14508 124 aa5.27□□□□□ -1.57
ERCC8-202ENST00000381118 IFITM1P13164 125 aa5.26□□□□□ -1.57
ERCC8-202ENST00000381118 H3BUT2 72 aa5.25□□□□□ -1.57
ERCC8-202ENST00000381118 H7C2G1 150 aa5.25□□□□□ -1.57
ERCC8-202ENST00000381118 COX17Q14061 63 aa5.25□□□□□ -1.57
ERCC8-202ENST00000381118 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.25□□□□□ -1.57
ERCC8-202ENST00000381118 C2orf48Q96LS8 159 aa5.25□□□□□ -1.57
ERCC8-202ENST00000381118 A0A1B0GWB2 263 aa5.24□□□□□ -1.57
ERCC8-202ENST00000381118 C3orf84H3BNL1 204 aa5.24□□□□□ -1.57
ERCC8-202ENST00000381118 SLPIP03973 132 aa5.24□□□□□ -1.57
ERCC8-202ENST00000381118 SYCNQ0VAF6 134 aa5.24□□□□□ -1.57
ERCC8-202ENST00000381118 COPS9Q8WXC6 57 aa5.24□□□□□ -1.57
ERCC8-202ENST00000381118 LINC00476Q8WZB0 136 aa5.24□□□□□ -1.57
ERCC8-202ENST00000381118 SND1-IT1Q9HBX3 110 aa5.24□□□□□ -1.57
ERCC8-202ENST00000381118 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.24□□□□□ -1.57
ERCC8-202ENST00000381118 TRBV30A0A0K0K1B3 111 aa5.24□□□□□ -1.57
ERCC8-202ENST00000381118 CARD19Q96LW7 228 aa5.24□□□□□ -1.57
ERCC8-202ENST00000381118 PRO1854Q9UHT4 67 aa5.24□□□□□ -1.57
ERCC8-202ENST00000381118 ALMS1Q8TCU4 4167 aa5.23□□□□□ -1.57
ERCC8-202ENST00000381118 A0A0B4J2C4 111 aa5.23□□□□□ -1.57
ERCC8-202ENST00000381118 C9orf118A6NHY6 69 aa5.23□□□□□ -1.57
ERCC8-202ENST00000381118 GAGE2EQ4V326 116 aa5.23□□□□□ -1.57
ERCC8-202ENST00000381118 XAGE1AQ9HD64 81 aa5.23□□□□□ -1.57
ERCC8-202ENST00000381118 GAGE2DQ9UEU5 116 aa5.23□□□□□ -1.57
ERCC8-202ENST00000381118 TSPAN13O95857 204 aa5.23□□□□□ -1.57
ERCC8-202ENST00000381118 Q1RN00 199 aa5.23□□□□□ -1.57
ERCC8-202ENST00000381118 Q6ZRN7 208 aaPredicted RBP5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 116 ms