RNA–Protein interactions for RNA: ENST00000381020.7

CDX2-201, Transcript of caudal type homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDX2, Length 4,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2-201ENST00000381020 SHISA2Q6UWI4 295 aa8.82□□□□□ -1
CDX2-201ENST00000381020 C15orf53Q8NAA6 179 aa8.82□□□□□ -1
CDX2-201ENST00000381020 LECT2O14960 151 aa8.82□□□□□ -1
CDX2-201ENST00000381020 SPANXCQ9NY87 97 aa8.82□□□□□ -1
CDX2-201ENST00000381020 NIPBLQ6KC79 2804 aaeCLIP8.82□□□□□ -1
CDX2-201ENST00000381020 HIVEP1P15822 2718 aa8.82□□□□□ -1
CDX2-201ENST00000381020 KPRPQ5T749 579 aaPredicted RBP8.82□□□□□ -1
CDX2-201ENST00000381020 TRBV10-2A0A0K0K1G8 114 aa8.81□□□□□ -1
CDX2-201ENST00000381020 GIG44P09565 113 aaPredicted RBP8.81□□□□□ -1
CDX2-201ENST00000381020 CELA1Q9UNI1 258 aa8.81□□□□□ -1
CDX2-201ENST00000381020 A8MTW9 85 aa8.81□□□□□ -1
CDX2-201ENST00000381020 SPANXDQ9BXN6 97 aa8.81□□□□□ -1
CDX2-201ENST00000381020 XAGE1AQ9HD64 81 aa8.8□□□□□ -1
CDX2-201ENST00000381020 NANOS2P60321 138 aaKnown RBP8.8□□□□□ -1
CDX2-201ENST00000381020 HIST1H4AP62805 103 aaKnown RBP8.8□□□□□ -1
CDX2-201ENST00000381020 CSDC2Q9Y534 153 aaKnown RBP8.8□□□□□ -1
CDX2-201ENST00000381020 X6R8D5 127 aa8.79□□□□□ -1
CDX2-201ENST00000381020 C9orf116Q5BN46 136 aaPredicted RBP8.79□□□□□ -1
CDX2-201ENST00000381020 A0A0J9YWU9 116 aa8.78□□□□□ -1
CDX2-201ENST00000381020 IBA57-AS1B1ANH7 110 aa8.78□□□□□ -1
CDX2-201ENST00000381020 CCL18P55774 89 aa8.78□□□□□ -1
CDX2-201ENST00000381020 RPL18AQ02543 176 aaKnown RBP8.78□□□□□ -1
CDX2-201ENST00000381020 Q6ZTC4 211 aa8.78□□□□□ -1
CDX2-201ENST00000381020 C19orf73Q9NVV2 129 aa8.78□□□□□ -1
CDX2-201ENST00000381020 TRBV30A0A0K0K1B3 111 aa8.78□□□□□ -1
CDX2-201ENST00000381020 SPATA3Q8NHX4 192 aa8.78□□□□□ -1
CDX2-201ENST00000381020 CD164L2Q6UWJ8 174 aa8.78□□□□□ -1
CDX2-201ENST00000381020 TIMM17BO60830 172 aa8.77□□□□□ -1
CDX2-201ENST00000381020 MT-ATP8P03928 68 aa8.77□□□□□ -1
CDX2-201ENST00000381020 Q8N3U1 123 aa8.77□□□□□ -1.01
CDX2-201ENST00000381020 SLPIP03973 132 aa8.76□□□□□ -1.01
CDX2-201ENST00000381020 INAFM2P0DMQ5 153 aa8.76□□□□□ -1.01
CDX2-201ENST00000381020 NKAPP1Q8N9T2 125 aa8.76□□□□□ -1.01
CDX2-201ENST00000381020 LELP1Q5T871 98 aa8.76□□□□□ -1.01
CDX2-201ENST00000381020 NSD1Q96L73 2696 aaPredicted RBP8.76□□□□□ -1.01
CDX2-201ENST00000381020 PRR3P79522 188 aaKnown RBP8.76□□□□□ -1.01
CDX2-201ENST00000381020 CSNK1G2-AS1Q8NCQ2 148 aa8.76□□□□□ -1.01
CDX2-201ENST00000381020 RNF183Q96D59 192 aa8.76□□□□□ -1.01
CDX2-201ENST00000381020 A0A087WZ39 114 aa8.75□□□□□ -1.01
CDX2-201ENST00000381020 H0YGX0 51 aa8.75□□□□□ -1.01
CDX2-201ENST00000381020 CXCL5P42830 114 aa8.75□□□□□ -1.01
CDX2-201ENST00000381020 H3BT86 120 aa8.75□□□□□ -1.01
CDX2-201ENST00000381020 KRTAP24-1Q3LI83 254 aa8.74□□□□□ -1.01
CDX2-201ENST00000381020 UNQ6190/PRO20217Q6UXQ8 127 aa8.74□□□□□ -1.01
CDX2-201ENST00000381020 BAHCC1Q9P281 2608 aa8.74□□□□□ -1.01
CDX2-201ENST00000381020 TMEM126AQ9H061 195 aa8.74□□□□□ -1.01
CDX2-201ENST00000381020 ORMDL1Q9P0S3 153 aa8.73□□□□□ -1.01
CDX2-201ENST00000381020 CITED1Q99966 193 aa8.73□□□□□ -1.01
CDX2-201ENST00000381020 IGHV3OR16-9A0A0B4J2B5 98 aa8.73□□□□□ -1.01
CDX2-201ENST00000381020 PLAC8L1A1L4L8 177 aa8.72□□□□□ -1.01
CDX2-201ENST00000381020 CSMD2Q7Z408 3487 aa8.72□□□□□ -1.01
CDX2-201ENST00000381020 IGLV5-39A0A0G2JS06 123 aa8.72□□□□□ -1.01
CDX2-201ENST00000381020 SMIM11BQ8TCY0 68 aa8.71□□□□□ -1.01
CDX2-201ENST00000381020 LST1O00453 97 aa8.71□□□□□ -1.02
CDX2-201ENST00000381020 C6orf223Q8N319 242 aa8.71□□□□□ -1.02
CDX2-201ENST00000381020 CYSRT1A8MQ03 144 aa8.71□□□□□ -1.02
CDX2-201ENST00000381020 EIF4EBP3O60516 100 aaPredicted RBP8.71□□□□□ -1.02
CDX2-201ENST00000381020 WFDC10BQ8IUB3 73 aa8.7□□□□□ -1.02
CDX2-201ENST00000381020 DEFB105AQ8NG35 78 aa8.7□□□□□ -1.02
CDX2-201ENST00000381020 IGKV3D-7A0A0C4DH55 119 aa8.7□□□□□ -1.02
CDX2-201ENST00000381020 C6orf99Q4VX62 202 aa8.7□□□□□ -1.02
CDX2-201ENST00000381020 C14orf132Q9NPU4 83 aa8.7□□□□□ -1.02
CDX2-201ENST00000381020 Q8IZM0 81 aa8.7□□□□□ -1.02
CDX2-201ENST00000381020 SPATA25Q9BR10 227 aa8.7□□□□□ -1.02
CDX2-201ENST00000381020 A0A1B0GUV1 79 aa8.69□□□□□ -1.02
CDX2-201ENST00000381020 HAMPP81172 84 aa8.69□□□□□ -1.02
CDX2-201ENST00000381020 SOSTDC1Q6X4U4 206 aa8.69□□□□□ -1.02
CDX2-201ENST00000381020 IGLV5-45A0A087WSX0 123 aa8.68□□□□□ -1.02
CDX2-201ENST00000381020 TENM4Q6N022 2769 aa8.68□□□□□ -1.02
CDX2-201ENST00000381020 B5MCH6 92 aa8.68□□□□□ -1.02
CDX2-201ENST00000381020 RMI2Q96E14 147 aa8.68□□□□□ -1.02
CDX2-201ENST00000381020 GHRHP01286 108 aa8.68□□□□□ -1.02
CDX2-201ENST00000381020 XGP55808 180 aa8.67□□□□□ -1.02
CDX2-201ENST00000381020 LYPD5Q6UWN5 251 aa8.67□□□□□ -1.02
CDX2-201ENST00000381020 SBSPONQ8IVN8 264 aa8.67□□□□□ -1.02
CDX2-201ENST00000381020 SMCPP49901 116 aaPredicted RBP8.66□□□□□ -1.02
CDX2-201ENST00000381020 LINC00337Q8N6G1 96 aa8.66□□□□□ -1.02
CDX2-201ENST00000381020 Q8NAQ8 132 aa8.66□□□□□ -1.02
CDX2-201ENST00000381020 IL17DQ8TAD2 202 aa8.66□□□□□ -1.02
CDX2-201ENST00000381020 SS18L2Q9UHA2 77 aa8.66□□□□□ -1.02
CDX2-201ENST00000381020 LITAFQ99732 161 aa8.65□□□□□ -1.02
CDX2-201ENST00000381020 IGKV2-24A0A0C4DH68 120 aa8.64□□□□□ -1.03
CDX2-201ENST00000381020 WFDC9Q8NEX5 89 aa8.64□□□□□ -1.03
CDX2-201ENST00000381020 TRAV10A0A0B4J240 114 aa8.64□□□□□ -1.03
CDX2-201ENST00000381020 TRACP01848 142 aa8.64□□□□□ -1.03
CDX2-201ENST00000381020 DSCR8Q96T75 97 aa8.64□□□□□ -1.03
CDX2-201ENST00000381020 DIRC1Q969H9 104 aa8.64□□□□□ -1.03
CDX2-201ENST00000381020 FAM236AA0A1B0GUQ0 79 aa8.63□□□□□ -1.03
CDX2-201ENST00000381020 FAM236BA0A1B0GV22 79 aa8.63□□□□□ -1.03
CDX2-201ENST00000381020 PRO0461Q9UI25 63 aa8.63□□□□□ -1.03
CDX2-201ENST00000381020 SYCNQ0VAF6 134 aa8.62□□□□□ -1.03
CDX2-201ENST00000381020 UBL5Q9BZL1 73 aa8.61□□□□□ -1.03
CDX2-201ENST00000381020 FAM104AQ969W3 186 aa8.61□□□□□ -1.03
CDX2-201ENST00000381020 A0A087WYN8 130 aa8.61□□□□□ -1.03
CDX2-201ENST00000381020 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.6□□□□□ -1.03
CDX2-201ENST00000381020 IGKV2-28A0A075B6P5 120 aa8.6□□□□□ -1.03
CDX2-201ENST00000381020 IGKV2D-28P01615 120 aa8.6□□□□□ -1.03
CDX2-201ENST00000381020 C9orf153Q5TBE3 101 aa8.6□□□□□ -1.03
CDX2-201ENST00000381020 UBE2BP63146 152 aa8.6□□□□□ -1.03
CDX2-201ENST00000381020 ETDCA0A1B0GVM5 59 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms