RNA–Protein interactions for RNA: ENST00000378726.1

SSU72-204, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 2,238 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-204ENST00000378726 HTN3P15516 51 aa13.5□□□□□ -0.25
SSU72-204ENST00000378726 TIRAPP58753 221 aa13.5□□□□□ -0.25
SSU72-204ENST00000378726 IGLV5-45A0A087WSX0 123 aa13.49□□□□□ -0.25
SSU72-204ENST00000378726 NDUFA1O15239 70 aa13.49□□□□□ -0.25
SSU72-204ENST00000378726 COX6CP09669 75 aa13.49□□□□□ -0.25
SSU72-204ENST00000378726 TRAV13-1A0A0B4J241 112 aa13.48□□□□□ -0.25
SSU72-204ENST00000378726 PRB2P02812 416 aaPredicted RBP13.48□□□□□ -0.25
SSU72-204ENST00000378726 MDFIQ99750 246 aa13.48□□□□□ -0.25
SSU72-204ENST00000378726 LST1O00453 97 aa13.47□□□□□ -0.25
SSU72-204ENST00000378726 LINC00242Q5T6M2 205 aa13.47□□□□□ -0.25
SSU72-204ENST00000378726 C15orf53Q8NAA6 179 aa13.47□□□□□ -0.25
SSU72-204ENST00000378726 CCDC179H3BU77 68 aa13.46□□□□□ -0.25
SSU72-204ENST00000378726 IGLV4-60A0A075B6I1 120 aa13.45□□□□□ -0.26
SSU72-204ENST00000378726 H3BT86 120 aa13.45□□□□□ -0.26
SSU72-204ENST00000378726 ZNF625Q96I27 306 aaPredicted RBP13.45□□□□□ -0.26
SSU72-204ENST00000378726 Q9H8V8 135 aa13.45□□□□□ -0.26
SSU72-204ENST00000378726 HERVK_113P63121 156 aa13.45□□□□□ -0.26
SSU72-204ENST00000378726 MRPL23Q16540 153 aaKnown RBP13.45□□□□□ -0.26
SSU72-204ENST00000378726 FAM19A3Q7Z5A8 133 aa13.45□□□□□ -0.26
SSU72-204ENST00000378726 A0A0U1RRA0 63 aa13.44□□□□□ -0.26
SSU72-204ENST00000378726 IGLV5-39A0A0G2JS06 123 aa13.44□□□□□ -0.26
SSU72-204ENST00000378726 LINC00308Q8TCZ7 52 aa13.44□□□□□ -0.26
SSU72-204ENST00000378726 CIRBPQ14011 172 aaKnown RBP13.43□□□□□ -0.26
SSU72-204ENST00000378726 NBEAL1Q6ZS30 2694 aa13.43□□□□□ -0.26
SSU72-204ENST00000378726 C11orf68Q9H3H3 251 aaKnown RBP13.41□□□□□ -0.26
SSU72-204ENST00000378726 DEFB121Q5J5C9 76 aa13.41□□□□□ -0.26
SSU72-204ENST00000378726 IGKV3OR2-268A0A0C4DH90 116 aa13.4□□□□□ -0.26
SSU72-204ENST00000378726 SMIM1B2RUZ4 78 aa13.4□□□□□ -0.26
SSU72-204ENST00000378726 SOSTDC1Q6X4U4 206 aa13.4□□□□□ -0.26
SSU72-204ENST00000378726 A0A0J9YWU9 116 aa13.4□□□□□ -0.26
SSU72-204ENST00000378726 FAM240AA0A1B0GVK7 77 aa13.4□□□□□ -0.26
SSU72-204ENST00000378726 K7EIL1 84 aa13.4□□□□□ -0.26
SSU72-204ENST00000378726 A0A1B0GUV1 79 aa13.39□□□□□ -0.27
SSU72-204ENST00000378726 MGAM2Q2M2H8 2515 aa13.39□□□□□ -0.27
SSU72-204ENST00000378726 Q6ZTC4 211 aa13.38□□□□□ -0.27
SSU72-204ENST00000378726 TENM3Q9P273 2699 aa13.36□□□□□ -0.27
SSU72-204ENST00000378726 MRAPQ8TCY5 172 aa13.36□□□□□ -0.27
SSU72-204ENST00000378726 MEIG1Q5JSS6 88 aa13.35□□□□□ -0.27
SSU72-204ENST00000378726 KPRPQ5T749 579 aaPredicted RBP13.35□□□□□ -0.27
SSU72-204ENST00000378726 C11orf45Q8TAV5 145 aa13.35□□□□□ -0.27
SSU72-204ENST00000378726 COX7A2LO14548 114 aa13.34□□□□□ -0.27
SSU72-204ENST00000378726 NANOS2P60321 138 aaKnown RBP13.34□□□□□ -0.27
SSU72-204ENST00000378726 LINC00959A0A1B0GUT2 108 aa13.33□□□□□ -0.27
SSU72-204ENST00000378726 LELP1Q5T871 98 aa13.33□□□□□ -0.28
SSU72-204ENST00000378726 SMIM20Q8N5G0 67 aa13.33□□□□□ -0.28
SSU72-204ENST00000378726 TM2D3Q9BRN9 247 aa13.32□□□□□ -0.28
SSU72-204ENST00000378726 TRBV7-7A0A0K0K1E9 115 aa13.32□□□□□ -0.28
SSU72-204ENST00000378726 H3BNG1 76 aa13.32□□□□□ -0.28
SSU72-204ENST00000378726 LYPD5Q6UWN5 251 aa13.32□□□□□ -0.28
SSU72-204ENST00000378726 IGHV3OR16-9A0A0B4J2B5 98 aa13.3□□□□□ -0.28
SSU72-204ENST00000378726 Q8N3U1 123 aa13.3□□□□□ -0.28
SSU72-204ENST00000378726 HERV-K104P63124 156 aa13.29□□□□□ -0.28
SSU72-204ENST00000378726 CLPSL2Q6UWE3 100 aa13.29□□□□□ -0.28
SSU72-204ENST00000378726 LINC00269Q8N2A0 174 aa13.29□□□□□ -0.28
SSU72-204ENST00000378726 COPS9Q8WXC6 57 aa13.29□□□□□ -0.28
SSU72-204ENST00000378726 DEFB131BA0A096LNP1 70 aa13.29□□□□□ -0.28
SSU72-204ENST00000378726 SS18Q15532 418 aa13.29□□□□□ -0.28
SSU72-204ENST00000378726 ACYP1P07311 99 aa13.28□□□□□ -0.28
SSU72-204ENST00000378726 ANGP03950 147 aaKnown RBP13.28□□□□□ -0.28
SSU72-204ENST00000378726 FAM218AQ96MZ4 157 aa13.27□□□□□ -0.28
SSU72-204ENST00000378726 C5orf38Q86SI9 138 aa13.27□□□□□ -0.29
SSU72-204ENST00000378726 IMUPQ9GZP8 106 aa13.27□□□□□ -0.29
SSU72-204ENST00000378726 XCL1P47992 114 aa13.26□□□□□ -0.29
SSU72-204ENST00000378726 TMEM126AQ9H061 195 aa13.26□□□□□ -0.29
SSU72-204ENST00000378726 A0A087WZ39 114 aa13.25□□□□□ -0.29
SSU72-204ENST00000378726 REG3AQ06141 175 aa13.24□□□□□ -0.29
SSU72-204ENST00000378726 TRACP01848 142 aa13.24□□□□□ -0.29
SSU72-204ENST00000378726 C22orf24Q9Y442 160 aa13.24□□□□□ -0.29
SSU72-204ENST00000378726 HUWE1Q7Z6Z7 4374 aaKnown RBP13.24□□□□□ -0.29
SSU72-204ENST00000378726 BAALC-AS2P0C853 105 aa13.23□□□□□ -0.29
SSU72-204ENST00000378726 CFAP161Q6P656 301 aa13.23□□□□□ -0.29
SSU72-204ENST00000378726 COX7B2Q8TF08 81 aa13.23□□□□□ -0.29
SSU72-204ENST00000378726 TOMM7Q9P0U1 55 aa13.23□□□□□ -0.29
SSU72-204ENST00000378726 MIR7-3HGQ8N6C7 128 aa13.21□□□□□ -0.29
SSU72-204ENST00000378726 SMCR5Q8TEV8 140 aa13.21□□□□□ -0.29
SSU72-204ENST00000378726 IGLV10-54A0A075B6I4 117 aa13.2□□□□□ -0.3
SSU72-204ENST00000378726 ESRGQ1W209 222 aa13.2□□□□□ -0.3
SSU72-204ENST00000378726 PPDPFQ9H3Y8 114 aa13.2□□□□□ -0.3
SSU72-204ENST00000378726 FAM236AA0A1B0GUQ0 79 aa13.2□□□□□ -0.3
SSU72-204ENST00000378726 FAM236BA0A1B0GV22 79 aa13.2□□□□□ -0.3
SSU72-204ENST00000378726 LINC00337Q8N6G1 96 aa13.2□□□□□ -0.3
SSU72-204ENST00000378726 CHCHD10Q8WYQ3 142 aaPredicted RBP13.2□□□□□ -0.3
SSU72-204ENST00000378726 Q9HAA7 133 aa13.2□□□□□ -0.3
SSU72-204ENST00000378726 KLK12Q9UKR0 248 aa13.2□□□□□ -0.3
SSU72-204ENST00000378726 IGKV2-28A0A075B6P5 120 aa13.19□□□□□ -0.3
SSU72-204ENST00000378726 IGKV2D-28P01615 120 aa13.19□□□□□ -0.3
SSU72-204ENST00000378726 CD164L2Q6UWJ8 174 aa13.19□□□□□ -0.3
SSU72-204ENST00000378726 TRAV13-2A0A0B4J235 113 aa13.19□□□□□ -0.3
SSU72-204ENST00000378726 TRAV10A0A0B4J240 114 aa13.19□□□□□ -0.3
SSU72-204ENST00000378726 RPL28P46779 137 aaKnown RBP13.18□□□□□ -0.3
SSU72-204ENST00000378726 LINC00643Q86TS7 51 aa13.18□□□□□ -0.3
SSU72-204ENST00000378726 CRPP02741 224 aa13.17□□□□□ -0.3
SSU72-204ENST00000378726 WFDC10BQ8IUB3 73 aa13.17□□□□□ -0.3
SSU72-204ENST00000378726 SND1-IT1Q9HBX3 110 aa13.17□□□□□ -0.3
SSU72-204ENST00000378726 PRR34Q9NV39 138 aa13.16□□□□□ -0.3
SSU72-204ENST00000378726 LINC00158P58513 81 aa13.16□□□□□ -0.3
SSU72-204ENST00000378726 LINC01561Q8N1V8 128 aa13.16□□□□□ -0.3
SSU72-204ENST00000378726 C6orf226Q5I0X4 101 aa13.15□□□□□ -0.3
SSU72-204ENST00000378726 ENHOQ6UWT2 76 aa13.15□□□□□ -0.31
SSU72-204ENST00000378726 MALP21145 153 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 178.5 ms